GO Enrichment Analysis of Co-expressed Genes with
AT1G72640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 2 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 3 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 4 | GO:0006849: plasma membrane pyruvate transport | 0.00E+00 |
| 5 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 6 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 6.06E-10 |
| 8 | GO:0032544: plastid translation | 3.99E-08 |
| 9 | GO:0015979: photosynthesis | 4.93E-07 |
| 10 | GO:0006412: translation | 7.03E-07 |
| 11 | GO:0009735: response to cytokinin | 7.57E-07 |
| 12 | GO:0042254: ribosome biogenesis | 2.19E-06 |
| 13 | GO:0009773: photosynthetic electron transport in photosystem I | 1.44E-05 |
| 14 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.23E-05 |
| 15 | GO:1901259: chloroplast rRNA processing | 1.00E-04 |
| 16 | GO:0000476: maturation of 4.5S rRNA | 2.04E-04 |
| 17 | GO:0000967: rRNA 5'-end processing | 2.04E-04 |
| 18 | GO:0010028: xanthophyll cycle | 2.04E-04 |
| 19 | GO:0034337: RNA folding | 2.04E-04 |
| 20 | GO:0006783: heme biosynthetic process | 2.57E-04 |
| 21 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.60E-04 |
| 22 | GO:0031537: regulation of anthocyanin metabolic process | 4.57E-04 |
| 23 | GO:0016122: xanthophyll metabolic process | 4.57E-04 |
| 24 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.57E-04 |
| 25 | GO:0010270: photosystem II oxygen evolving complex assembly | 4.57E-04 |
| 26 | GO:0034470: ncRNA processing | 4.57E-04 |
| 27 | GO:0010207: photosystem II assembly | 6.10E-04 |
| 28 | GO:0006518: peptide metabolic process | 7.44E-04 |
| 29 | GO:0035436: triose phosphate transmembrane transport | 7.44E-04 |
| 30 | GO:0006696: ergosterol biosynthetic process | 7.44E-04 |
| 31 | GO:0006000: fructose metabolic process | 7.44E-04 |
| 32 | GO:0061077: chaperone-mediated protein folding | 1.01E-03 |
| 33 | GO:0010731: protein glutathionylation | 1.06E-03 |
| 34 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.06E-03 |
| 35 | GO:0045338: farnesyl diphosphate metabolic process | 1.06E-03 |
| 36 | GO:0006020: inositol metabolic process | 1.06E-03 |
| 37 | GO:0071484: cellular response to light intensity | 1.06E-03 |
| 38 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.06E-03 |
| 39 | GO:0010601: positive regulation of auxin biosynthetic process | 1.06E-03 |
| 40 | GO:0015713: phosphoglycerate transport | 1.41E-03 |
| 41 | GO:0006021: inositol biosynthetic process | 1.41E-03 |
| 42 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.41E-03 |
| 43 | GO:0015994: chlorophyll metabolic process | 1.41E-03 |
| 44 | GO:0022622: root system development | 1.41E-03 |
| 45 | GO:0071368: cellular response to cytokinin stimulus | 1.80E-03 |
| 46 | GO:0006461: protein complex assembly | 1.80E-03 |
| 47 | GO:0046855: inositol phosphate dephosphorylation | 2.21E-03 |
| 48 | GO:1902456: regulation of stomatal opening | 2.21E-03 |
| 49 | GO:0010190: cytochrome b6f complex assembly | 2.21E-03 |
| 50 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.21E-03 |
| 51 | GO:0009643: photosynthetic acclimation | 2.21E-03 |
| 52 | GO:0000470: maturation of LSU-rRNA | 2.21E-03 |
| 53 | GO:0006828: manganese ion transport | 2.21E-03 |
| 54 | GO:0080113: regulation of seed growth | 2.66E-03 |
| 55 | GO:0009854: oxidative photosynthetic carbon pathway | 2.66E-03 |
| 56 | GO:0080036: regulation of cytokinin-activated signaling pathway | 2.66E-03 |
| 57 | GO:0009955: adaxial/abaxial pattern specification | 2.66E-03 |
| 58 | GO:0042026: protein refolding | 2.66E-03 |
| 59 | GO:0032880: regulation of protein localization | 3.13E-03 |
| 60 | GO:0009772: photosynthetic electron transport in photosystem II | 3.13E-03 |
| 61 | GO:0048437: floral organ development | 3.13E-03 |
| 62 | GO:0006353: DNA-templated transcription, termination | 3.63E-03 |
| 63 | GO:0006002: fructose 6-phosphate metabolic process | 4.15E-03 |
| 64 | GO:0009657: plastid organization | 4.15E-03 |
| 65 | GO:0010206: photosystem II repair | 4.70E-03 |
| 66 | GO:0006754: ATP biosynthetic process | 4.70E-03 |
| 67 | GO:0009853: photorespiration | 4.76E-03 |
| 68 | GO:0010380: regulation of chlorophyll biosynthetic process | 5.27E-03 |
| 69 | GO:0006631: fatty acid metabolic process | 5.66E-03 |
| 70 | GO:0009641: shade avoidance | 5.86E-03 |
| 71 | GO:0009658: chloroplast organization | 6.35E-03 |
| 72 | GO:0006415: translational termination | 6.48E-03 |
| 73 | GO:0006816: calcium ion transport | 6.48E-03 |
| 74 | GO:0006790: sulfur compound metabolic process | 7.12E-03 |
| 75 | GO:0005983: starch catabolic process | 7.12E-03 |
| 76 | GO:0006094: gluconeogenesis | 7.78E-03 |
| 77 | GO:0005986: sucrose biosynthetic process | 7.78E-03 |
| 78 | GO:2000012: regulation of auxin polar transport | 7.78E-03 |
| 79 | GO:0019253: reductive pentose-phosphate cycle | 8.47E-03 |
| 80 | GO:0010223: secondary shoot formation | 8.47E-03 |
| 81 | GO:0071732: cellular response to nitric oxide | 9.17E-03 |
| 82 | GO:0046854: phosphatidylinositol phosphorylation | 9.17E-03 |
| 83 | GO:0005985: sucrose metabolic process | 9.17E-03 |
| 84 | GO:0009409: response to cold | 1.04E-02 |
| 85 | GO:0051017: actin filament bundle assembly | 1.06E-02 |
| 86 | GO:0000027: ribosomal large subunit assembly | 1.06E-02 |
| 87 | GO:0006457: protein folding | 1.07E-02 |
| 88 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.14E-02 |
| 89 | GO:0006418: tRNA aminoacylation for protein translation | 1.14E-02 |
| 90 | GO:0055114: oxidation-reduction process | 1.18E-02 |
| 91 | GO:0016114: terpenoid biosynthetic process | 1.22E-02 |
| 92 | GO:0035428: hexose transmembrane transport | 1.30E-02 |
| 93 | GO:0016226: iron-sulfur cluster assembly | 1.30E-02 |
| 94 | GO:0007005: mitochondrion organization | 1.30E-02 |
| 95 | GO:0010082: regulation of root meristem growth | 1.38E-02 |
| 96 | GO:0071369: cellular response to ethylene stimulus | 1.38E-02 |
| 97 | GO:0006012: galactose metabolic process | 1.38E-02 |
| 98 | GO:0008284: positive regulation of cell proliferation | 1.55E-02 |
| 99 | GO:0016117: carotenoid biosynthetic process | 1.55E-02 |
| 100 | GO:0080022: primary root development | 1.64E-02 |
| 101 | GO:0009958: positive gravitropism | 1.73E-02 |
| 102 | GO:0046323: glucose import | 1.73E-02 |
| 103 | GO:0015986: ATP synthesis coupled proton transport | 1.82E-02 |
| 104 | GO:0006814: sodium ion transport | 1.82E-02 |
| 105 | GO:0006633: fatty acid biosynthetic process | 1.86E-02 |
| 106 | GO:0019252: starch biosynthetic process | 1.92E-02 |
| 107 | GO:0009556: microsporogenesis | 1.92E-02 |
| 108 | GO:0071281: cellular response to iron ion | 2.21E-02 |
| 109 | GO:0010027: thylakoid membrane organization | 2.61E-02 |
| 110 | GO:0016126: sterol biosynthetic process | 2.61E-02 |
| 111 | GO:0009607: response to biotic stimulus | 2.72E-02 |
| 112 | GO:0009627: systemic acquired resistance | 2.83E-02 |
| 113 | GO:0048481: plant ovule development | 3.16E-02 |
| 114 | GO:0008219: cell death | 3.16E-02 |
| 115 | GO:0009817: defense response to fungus, incompatible interaction | 3.16E-02 |
| 116 | GO:0000160: phosphorelay signal transduction system | 3.27E-02 |
| 117 | GO:0009813: flavonoid biosynthetic process | 3.27E-02 |
| 118 | GO:0048527: lateral root development | 3.50E-02 |
| 119 | GO:0007568: aging | 3.50E-02 |
| 120 | GO:0006810: transport | 3.69E-02 |
| 121 | GO:0046686: response to cadmium ion | 4.02E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051060: pullulanase activity | 0.00E+00 |
| 2 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 3 | GO:0004853: uroporphyrinogen decarboxylase activity | 0.00E+00 |
| 4 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 5 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 6 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 7 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 8 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 9 | GO:0090711: FMN hydrolase activity | 0.00E+00 |
| 10 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 11 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 12 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 13 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 14 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 15 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 16 | GO:0019843: rRNA binding | 1.79E-13 |
| 17 | GO:0003735: structural constituent of ribosome | 1.38E-08 |
| 18 | GO:0005528: FK506 binding | 1.76E-08 |
| 19 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.14E-07 |
| 20 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 2.04E-04 |
| 21 | GO:0018708: thiol S-methyltransferase activity | 4.57E-04 |
| 22 | GO:0008967: phosphoglycolate phosphatase activity | 4.57E-04 |
| 23 | GO:0016630: protochlorophyllide reductase activity | 4.57E-04 |
| 24 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 4.57E-04 |
| 25 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.57E-04 |
| 26 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.57E-04 |
| 27 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.57E-04 |
| 28 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.57E-04 |
| 29 | GO:0050833: pyruvate transmembrane transporter activity | 7.44E-04 |
| 30 | GO:0005504: fatty acid binding | 7.44E-04 |
| 31 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 7.44E-04 |
| 32 | GO:0071917: triose-phosphate transmembrane transporter activity | 7.44E-04 |
| 33 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 7.44E-04 |
| 34 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 7.44E-04 |
| 35 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 7.44E-04 |
| 36 | GO:0002161: aminoacyl-tRNA editing activity | 7.44E-04 |
| 37 | GO:0016491: oxidoreductase activity | 8.54E-04 |
| 38 | GO:0016851: magnesium chelatase activity | 1.06E-03 |
| 39 | GO:0016149: translation release factor activity, codon specific | 1.06E-03 |
| 40 | GO:0043023: ribosomal large subunit binding | 1.06E-03 |
| 41 | GO:0008097: 5S rRNA binding | 1.06E-03 |
| 42 | GO:0008508: bile acid:sodium symporter activity | 1.06E-03 |
| 43 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.06E-03 |
| 44 | GO:0019201: nucleotide kinase activity | 1.06E-03 |
| 45 | GO:0045430: chalcone isomerase activity | 1.41E-03 |
| 46 | GO:0015120: phosphoglycerate transmembrane transporter activity | 1.41E-03 |
| 47 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.41E-03 |
| 48 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.41E-03 |
| 49 | GO:0003959: NADPH dehydrogenase activity | 1.80E-03 |
| 50 | GO:0004556: alpha-amylase activity | 2.21E-03 |
| 51 | GO:0004629: phospholipase C activity | 2.21E-03 |
| 52 | GO:0004017: adenylate kinase activity | 2.66E-03 |
| 53 | GO:0004435: phosphatidylinositol phospholipase C activity | 2.66E-03 |
| 54 | GO:0051920: peroxiredoxin activity | 2.66E-03 |
| 55 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.66E-03 |
| 56 | GO:0004033: aldo-keto reductase (NADP) activity | 3.63E-03 |
| 57 | GO:0004525: ribonuclease III activity | 3.63E-03 |
| 58 | GO:0016209: antioxidant activity | 3.63E-03 |
| 59 | GO:0004034: aldose 1-epimerase activity | 3.63E-03 |
| 60 | GO:0004222: metalloendopeptidase activity | 4.15E-03 |
| 61 | GO:0003747: translation release factor activity | 4.70E-03 |
| 62 | GO:0071949: FAD binding | 4.70E-03 |
| 63 | GO:0005384: manganese ion transmembrane transporter activity | 5.27E-03 |
| 64 | GO:0047617: acyl-CoA hydrolase activity | 5.27E-03 |
| 65 | GO:0030234: enzyme regulator activity | 5.86E-03 |
| 66 | GO:0044183: protein binding involved in protein folding | 6.48E-03 |
| 67 | GO:0047372: acylglycerol lipase activity | 6.48E-03 |
| 68 | GO:0051537: 2 iron, 2 sulfur cluster binding | 6.63E-03 |
| 69 | GO:0000049: tRNA binding | 7.12E-03 |
| 70 | GO:0015095: magnesium ion transmembrane transporter activity | 7.78E-03 |
| 71 | GO:0031072: heat shock protein binding | 7.78E-03 |
| 72 | GO:0008266: poly(U) RNA binding | 8.47E-03 |
| 73 | GO:0008083: growth factor activity | 8.47E-03 |
| 74 | GO:0031409: pigment binding | 9.90E-03 |
| 75 | GO:0051536: iron-sulfur cluster binding | 1.06E-02 |
| 76 | GO:0051082: unfolded protein binding | 1.18E-02 |
| 77 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.52E-02 |
| 78 | GO:0004812: aminoacyl-tRNA ligase activity | 1.55E-02 |
| 79 | GO:0005102: receptor binding | 1.55E-02 |
| 80 | GO:0003723: RNA binding | 1.62E-02 |
| 81 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.73E-02 |
| 82 | GO:0005355: glucose transmembrane transporter activity | 1.82E-02 |
| 83 | GO:0016853: isomerase activity | 1.82E-02 |
| 84 | GO:0048038: quinone binding | 2.01E-02 |
| 85 | GO:0000156: phosphorelay response regulator activity | 2.21E-02 |
| 86 | GO:0051015: actin filament binding | 2.21E-02 |
| 87 | GO:0008237: metallopeptidase activity | 2.41E-02 |
| 88 | GO:0016168: chlorophyll binding | 2.72E-02 |
| 89 | GO:0008168: methyltransferase activity | 3.05E-02 |
| 90 | GO:0003746: translation elongation factor activity | 3.74E-02 |
| 91 | GO:0003993: acid phosphatase activity | 3.86E-02 |
| 92 | GO:0004497: monooxygenase activity | 3.92E-02 |
| 93 | GO:0004364: glutathione transferase activity | 4.35E-02 |
| 94 | GO:0005507: copper ion binding | 4.37E-02 |
| 95 | GO:0043621: protein self-association | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 3 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 4.64E-65 |
| 5 | GO:0009570: chloroplast stroma | 1.41E-41 |
| 6 | GO:0009941: chloroplast envelope | 1.12E-37 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 1.41E-36 |
| 8 | GO:0009534: chloroplast thylakoid | 3.34E-27 |
| 9 | GO:0009579: thylakoid | 8.93E-23 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 1.79E-13 |
| 11 | GO:0031977: thylakoid lumen | 1.04E-10 |
| 12 | GO:0005840: ribosome | 2.88E-09 |
| 13 | GO:0031969: chloroplast membrane | 2.95E-07 |
| 14 | GO:0030095: chloroplast photosystem II | 2.78E-05 |
| 15 | GO:0009547: plastid ribosome | 2.04E-04 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.57E-04 |
| 17 | GO:0010319: stromule | 2.63E-04 |
| 18 | GO:0010007: magnesium chelatase complex | 7.44E-04 |
| 19 | GO:0042651: thylakoid membrane | 9.21E-04 |
| 20 | GO:0015935: small ribosomal subunit | 1.01E-03 |
| 21 | GO:0005960: glycine cleavage complex | 1.06E-03 |
| 22 | GO:0009544: chloroplast ATP synthase complex | 1.41E-03 |
| 23 | GO:0009706: chloroplast inner membrane | 1.82E-03 |
| 24 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.21E-03 |
| 25 | GO:0009840: chloroplastic endopeptidase Clp complex | 2.66E-03 |
| 26 | GO:0009533: chloroplast stromal thylakoid | 3.13E-03 |
| 27 | GO:0005763: mitochondrial small ribosomal subunit | 4.70E-03 |
| 28 | GO:0022626: cytosolic ribosome | 6.79E-03 |
| 29 | GO:0000311: plastid large ribosomal subunit | 7.12E-03 |
| 30 | GO:0032040: small-subunit processome | 7.12E-03 |
| 31 | GO:0048046: apoplast | 7.75E-03 |
| 32 | GO:0009536: plastid | 8.74E-03 |
| 33 | GO:0022625: cytosolic large ribosomal subunit | 8.91E-03 |
| 34 | GO:0030076: light-harvesting complex | 9.17E-03 |
| 35 | GO:0009654: photosystem II oxygen evolving complex | 1.14E-02 |
| 36 | GO:0009532: plastid stroma | 1.22E-02 |
| 37 | GO:0015629: actin cytoskeleton | 1.38E-02 |
| 38 | GO:0016020: membrane | 1.79E-02 |
| 39 | GO:0009523: photosystem II | 1.92E-02 |
| 40 | GO:0019898: extrinsic component of membrane | 1.92E-02 |
| 41 | GO:0009707: chloroplast outer membrane | 3.16E-02 |
| 42 | GO:0015934: large ribosomal subunit | 3.50E-02 |
| 43 | GO:0005856: cytoskeleton | 4.86E-02 |