co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G72330

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0052386: cell wall thickening	0.00E+00
2	GO:0010407: non-classical arabinogalactan protein metabolic process	0.00E+00
3	GO:0080149: sucrose induced translational repression	0.00E+00
4	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
5	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
6	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
7	GO:0005993: trehalose catabolic process	0.00E+00
8	GO:0016192: vesicle-mediated transport	6.72E-05
9	GO:0030433: ubiquitin-dependent ERAD pathway	8.75E-05
10	GO:0044376: RNA polymerase II complex import to nucleus	2.20E-04
11	GO:0019478: D-amino acid catabolic process	2.20E-04
12	GO:0043609: regulation of carbon utilization	2.20E-04
13	GO:1903648: positive regulation of chlorophyll catabolic process	2.20E-04
14	GO:0035266: meristem growth	2.20E-04
15	GO:0000077: DNA damage checkpoint	2.20E-04
16	GO:0007292: female gamete generation	2.20E-04
17	GO:0042350: GDP-L-fucose biosynthetic process	2.20E-04
18	GO:1990641: response to iron ion starvation	2.20E-04
19	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.20E-04
20	GO:1990022: RNA polymerase III complex localization to nucleus	2.20E-04
21	GO:0030968: endoplasmic reticulum unfolded protein response	2.36E-04
22	GO:0051788: response to misfolded protein	4.90E-04
23	GO:0006101: citrate metabolic process	4.90E-04
24	GO:0009156: ribonucleoside monophosphate biosynthetic process	4.90E-04
25	GO:0006597: spermine biosynthetic process	4.90E-04
26	GO:0031538: negative regulation of anthocyanin metabolic process	4.90E-04
27	GO:0009805: coumarin biosynthetic process	4.90E-04
28	GO:0040020: regulation of meiotic nuclear division	4.90E-04
29	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	7.98E-04
30	GO:0010253: UDP-rhamnose biosynthetic process	7.98E-04
31	GO:0032504: multicellular organism reproduction	7.98E-04
32	GO:0009410: response to xenobiotic stimulus	7.98E-04
33	GO:0060968: regulation of gene silencing	7.98E-04
34	GO:0007275: multicellular organism development	8.20E-04
35	GO:0006457: protein folding	8.78E-04
36	GO:0006511: ubiquitin-dependent protein catabolic process	9.65E-04
37	GO:0071329: cellular response to sucrose stimulus	1.14E-03
38	GO:0009226: nucleotide-sugar biosynthetic process	1.14E-03
39	GO:0043967: histone H4 acetylation	1.14E-03
40	GO:0055070: copper ion homeostasis	1.14E-03
41	GO:0051639: actin filament network formation	1.14E-03
42	GO:0072334: UDP-galactose transmembrane transport	1.14E-03
43	GO:0009165: nucleotide biosynthetic process	1.51E-03
44	GO:0051764: actin crosslink formation	1.51E-03
45	GO:1902584: positive regulation of response to water deprivation	1.51E-03
46	GO:0006621: protein retention in ER lumen	1.51E-03
47	GO:0006097: glyoxylate cycle	1.93E-03
48	GO:0045927: positive regulation of growth	1.93E-03
49	GO:0009738: abscisic acid-activated signaling pathway	2.03E-03
50	GO:0006623: protein targeting to vacuole	2.09E-03
51	GO:0010315: auxin efflux	2.38E-03
52	GO:0006596: polyamine biosynthetic process	2.38E-03
53	GO:0006014: D-ribose metabolic process	2.38E-03
54	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.38E-03
55	GO:0048827: phyllome development	2.38E-03
56	GO:0048232: male gamete generation	2.38E-03
57	GO:0006555: methionine metabolic process	2.38E-03
58	GO:0043248: proteasome assembly	2.38E-03
59	GO:0042176: regulation of protein catabolic process	2.38E-03
60	GO:0030163: protein catabolic process	2.54E-03
61	GO:0006886: intracellular protein transport	2.73E-03
62	GO:0034389: lipid particle organization	2.86E-03
63	GO:0043966: histone H3 acetylation	2.86E-03
64	GO:0017148: negative regulation of translation	2.86E-03
65	GO:0080113: regulation of seed growth	2.86E-03
66	GO:0019509: L-methionine salvage from methylthioadenosine	2.86E-03
67	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.86E-03
68	GO:0030643: cellular phosphate ion homeostasis	2.86E-03
69	GO:1900057: positive regulation of leaf senescence	3.36E-03
70	GO:0010044: response to aluminum ion	3.36E-03
71	GO:0006401: RNA catabolic process	3.36E-03
72	GO:0006368: transcription elongation from RNA polymerase II promoter	3.36E-03
73	GO:0006744: ubiquinone biosynthetic process	3.36E-03
74	GO:0080186: developmental vegetative growth	3.36E-03
75	GO:0009816: defense response to bacterium, incompatible interaction	3.40E-03
76	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.90E-03
77	GO:0010078: maintenance of root meristem identity	3.90E-03
78	GO:0006102: isocitrate metabolic process	3.90E-03
79	GO:0007155: cell adhesion	3.90E-03
80	GO:0010928: regulation of auxin mediated signaling pathway	3.90E-03
81	GO:0035265: organ growth	3.90E-03
82	GO:0010417: glucuronoxylan biosynthetic process	4.47E-03
83	GO:0009699: phenylpropanoid biosynthetic process	4.47E-03
84	GO:0006002: fructose 6-phosphate metabolic process	4.47E-03
85	GO:0015996: chlorophyll catabolic process	4.47E-03
86	GO:0006499: N-terminal protein myristoylation	4.61E-03
87	GO:0090305: nucleic acid phosphodiester bond hydrolysis	5.06E-03
88	GO:0010332: response to gamma radiation	5.06E-03
89	GO:2000024: regulation of leaf development	5.06E-03
90	GO:0046686: response to cadmium ion	5.08E-03
91	GO:0008202: steroid metabolic process	5.68E-03
92	GO:0090332: stomatal closure	5.68E-03
93	GO:0009086: methionine biosynthetic process	5.68E-03
94	GO:0000103: sulfate assimilation	6.32E-03
95	GO:0048829: root cap development	6.32E-03
96	GO:0051555: flavonol biosynthetic process	6.32E-03
97	GO:0072593: reactive oxygen species metabolic process	6.98E-03
98	GO:0010015: root morphogenesis	6.98E-03
99	GO:0000209: protein polyubiquitination	7.11E-03
100	GO:0000266: mitochondrial fission	7.68E-03
101	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	8.28E-03
102	GO:0030036: actin cytoskeleton organization	8.39E-03
103	GO:0055046: microgametogenesis	8.39E-03
104	GO:0009933: meristem structural organization	9.13E-03
105	GO:0034605: cellular response to heat	9.13E-03
106	GO:0090351: seedling development	9.90E-03
107	GO:0007033: vacuole organization	9.90E-03
108	GO:0010053: root epidermal cell differentiation	9.90E-03
109	GO:0009225: nucleotide-sugar metabolic process	9.90E-03
110	GO:0034976: response to endoplasmic reticulum stress	1.07E-02
111	GO:0000162: tryptophan biosynthetic process	1.07E-02
112	GO:0006096: glycolytic process	1.09E-02
113	GO:0015031: protein transport	1.12E-02
114	GO:0009863: salicylic acid mediated signaling pathway	1.15E-02
115	GO:0030150: protein import into mitochondrial matrix	1.15E-02
116	GO:0051017: actin filament bundle assembly	1.15E-02
117	GO:0009116: nucleoside metabolic process	1.15E-02
118	GO:0008299: isoprenoid biosynthetic process	1.23E-02
119	GO:0019915: lipid storage	1.32E-02
120	GO:0009814: defense response, incompatible interaction	1.40E-02
121	GO:0019748: secondary metabolic process	1.40E-02
122	GO:0009411: response to UV	1.49E-02
123	GO:0016042: lipid catabolic process	1.52E-02
124	GO:0042127: regulation of cell proliferation	1.58E-02
125	GO:0010584: pollen exine formation	1.58E-02
126	GO:0008284: positive regulation of cell proliferation	1.68E-02
127	GO:0010051: xylem and phloem pattern formation	1.77E-02
128	GO:0006662: glycerol ether metabolic process	1.87E-02
129	GO:0045489: pectin biosynthetic process	1.87E-02
130	GO:0009790: embryo development	1.93E-02
131	GO:0019252: starch biosynthetic process	2.07E-02
132	GO:0006413: translational initiation	2.12E-02
133	GO:0006891: intra-Golgi vesicle-mediated transport	2.17E-02
134	GO:0016032: viral process	2.28E-02
135	GO:0019760: glucosinolate metabolic process	2.49E-02
136	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.55E-02
137	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.94E-02
138	GO:0006906: vesicle fusion	3.05E-02
139	GO:0016311: dephosphorylation	3.29E-02
140	GO:0010311: lateral root formation	3.53E-02
141	GO:0048767: root hair elongation	3.53E-02
142	GO:0010043: response to zinc ion	3.78E-02
143	GO:0009860: pollen tube growth	3.79E-02
144	GO:0045087: innate immune response	4.03E-02
145	GO:0016051: carbohydrate biosynthetic process	4.03E-02
146	GO:0034599: cellular response to oxidative stress	4.16E-02
147	GO:0006099: tricarboxylic acid cycle	4.16E-02
148	GO:0006887: exocytosis	4.56E-02
149	GO:0006631: fatty acid metabolic process	4.56E-02
150	GO:0042542: response to hydrogen peroxide	4.69E-02
151	GO:0008283: cell proliferation	4.83E-02
152	GO:0010114: response to red light	4.83E-02
153	GO:0009744: response to sucrose	4.83E-02
154	GO:0051707: response to other organism	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
2	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
3	GO:0005046: KDEL sequence binding	0.00E+00
4	GO:0061133: endopeptidase activator activity	0.00E+00
5	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
6	GO:0016504: peptidase activator activity	0.00E+00
7	GO:0034338: short-chain carboxylesterase activity	0.00E+00
8	GO:0070577: lysine-acetylated histone binding	0.00E+00
9	GO:0070628: proteasome binding	3.46E-05
10	GO:0008320: protein transmembrane transporter activity	1.49E-04
11	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.20E-04
12	GO:0102293: pheophytinase b activity	2.20E-04
13	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	2.20E-04
14	GO:0016768: spermine synthase activity	2.20E-04
15	GO:0050577: GDP-L-fucose synthase activity	2.20E-04
16	GO:0015927: trehalase activity	2.20E-04
17	GO:1990381: ubiquitin-specific protease binding	2.20E-04
18	GO:0051082: unfolded protein binding	3.17E-04
19	GO:0030234: enzyme regulator activity	4.00E-04
20	GO:0050377: UDP-glucose 4,6-dehydratase activity	4.90E-04
21	GO:0048531: beta-1,3-galactosyltransferase activity	4.90E-04
22	GO:0047746: chlorophyllase activity	4.90E-04
23	GO:0010297: heteropolysaccharide binding	4.90E-04
24	GO:0008460: dTDP-glucose 4,6-dehydratase activity	4.90E-04
25	GO:0003994: aconitate hydratase activity	4.90E-04
26	GO:0004766: spermidine synthase activity	4.90E-04
27	GO:0010280: UDP-L-rhamnose synthase activity	4.90E-04
28	GO:0050347: trans-octaprenyltranstransferase activity	4.90E-04
29	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	4.90E-04
30	GO:0000774: adenyl-nucleotide exchange factor activity	4.90E-04
31	GO:0000975: regulatory region DNA binding	7.98E-04
32	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	7.98E-04
33	GO:0005460: UDP-glucose transmembrane transporter activity	1.14E-03
34	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.14E-03
35	GO:0004749: ribose phosphate diphosphokinase activity	1.14E-03
36	GO:0000993: RNA polymerase II core binding	1.51E-03
37	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	1.51E-03
38	GO:0004659: prenyltransferase activity	1.51E-03
39	GO:0015368: calcium:cation antiporter activity	1.51E-03
40	GO:0004834: tryptophan synthase activity	1.51E-03
41	GO:0015369: calcium:proton antiporter activity	1.51E-03
42	GO:0046923: ER retention sequence binding	1.51E-03
43	GO:0016887: ATPase activity	1.69E-03
44	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.93E-03
45	GO:0004623: phospholipase A2 activity	1.93E-03
46	GO:0005459: UDP-galactose transmembrane transporter activity	1.93E-03
47	GO:0016853: isomerase activity	1.95E-03
48	GO:0047714: galactolipase activity	2.38E-03
49	GO:0036402: proteasome-activating ATPase activity	2.38E-03
50	GO:0004747: ribokinase activity	2.86E-03
51	GO:0004656: procollagen-proline 4-dioxygenase activity	2.86E-03
52	GO:0003872: 6-phosphofructokinase activity	3.36E-03
53	GO:0052747: sinapyl alcohol dehydrogenase activity	3.90E-03
54	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.90E-03
55	GO:0008865: fructokinase activity	3.90E-03
56	GO:0015491: cation:cation antiporter activity	3.90E-03
57	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.47E-03
58	GO:0008142: oxysterol binding	4.47E-03
59	GO:0004630: phospholipase D activity	4.47E-03
60	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	4.47E-03
61	GO:0003746: translation elongation factor activity	5.30E-03
62	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.30E-03
63	GO:0045309: protein phosphorylated amino acid binding	5.68E-03
64	GO:0030955: potassium ion binding	5.68E-03
65	GO:0004743: pyruvate kinase activity	5.68E-03
66	GO:0019904: protein domain specific binding	6.98E-03
67	GO:0004161: dimethylallyltranstransferase activity	6.98E-03
68	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.68E-03
69	GO:0008378: galactosyltransferase activity	7.68E-03
70	GO:0005388: calcium-transporting ATPase activity	8.39E-03
71	GO:0004175: endopeptidase activity	9.13E-03
72	GO:0017025: TBP-class protein binding	9.90E-03
73	GO:0004867: serine-type endopeptidase inhibitor activity	9.90E-03
74	GO:0031625: ubiquitin protein ligase binding	1.02E-02
75	GO:0031418: L-ascorbic acid binding	1.15E-02
76	GO:0043130: ubiquitin binding	1.15E-02
77	GO:0051087: chaperone binding	1.23E-02
78	GO:0004298: threonine-type endopeptidase activity	1.32E-02
79	GO:0008408: 3'-5' exonuclease activity	1.32E-02
80	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.40E-02
81	GO:0003924: GTPase activity	1.57E-02
82	GO:0003756: protein disulfide isomerase activity	1.58E-02
83	GO:0016758: transferase activity, transferring hexosyl groups	1.61E-02
84	GO:0047134: protein-disulfide reductase activity	1.68E-02
85	GO:0005102: receptor binding	1.68E-02
86	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.69E-02
87	GO:0004402: histone acetyltransferase activity	1.77E-02
88	GO:0004527: exonuclease activity	1.87E-02
89	GO:0050662: coenzyme binding	1.97E-02
90	GO:0004791: thioredoxin-disulfide reductase activity	1.97E-02
91	GO:0005524: ATP binding	2.03E-02
92	GO:0004872: receptor activity	2.07E-02
93	GO:0004518: nuclease activity	2.28E-02
94	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.38E-02
95	GO:0051015: actin filament binding	2.38E-02
96	GO:0016791: phosphatase activity	2.49E-02
97	GO:0003743: translation initiation factor activity	2.66E-02
98	GO:0051213: dioxygenase activity	2.82E-02
99	GO:0004806: triglyceride lipase activity	3.17E-02
100	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.41E-02
101	GO:0000287: magnesium ion binding	3.46E-02
102	GO:0004222: metalloendopeptidase activity	3.66E-02
103	GO:0050897: cobalt ion binding	3.78E-02
104	GO:0050660: flavin adenine dinucleotide binding	4.07E-02
105	GO:0003993: acid phosphatase activity	4.16E-02
106	GO:0000149: SNARE binding	4.30E-02
107	GO:0051539: 4 iron, 4 sulfur cluster binding	4.43E-02
108	GO:0061630: ubiquitin protein ligase activity	4.58E-02
109	GO:0030246: carbohydrate binding	4.65E-02
110	GO:0005484: SNAP receptor activity	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	6.89E-07
2	GO:0008541: proteasome regulatory particle, lid subcomplex	1.72E-05
3	GO:0005789: endoplasmic reticulum membrane	2.17E-05
4	GO:0005783: endoplasmic reticulum	3.25E-05
5	GO:0005801: cis-Golgi network	1.13E-04
6	GO:0044322: endoplasmic reticulum quality control compartment	2.20E-04
7	GO:0008023: transcription elongation factor complex	2.20E-04
8	GO:0001405: presequence translocase-associated import motor	2.20E-04
9	GO:0000836: Hrd1p ubiquitin ligase complex	2.20E-04
10	GO:0008540: proteasome regulatory particle, base subcomplex	3.41E-04
11	GO:0005788: endoplasmic reticulum lumen	3.80E-04
12	GO:0030134: ER to Golgi transport vesicle	4.90E-04
13	GO:0005774: vacuolar membrane	1.09E-03
14	GO:0005839: proteasome core complex	1.12E-03
15	GO:0036513: Derlin-1 retrotranslocation complex	1.14E-03
16	GO:0033588: Elongator holoenzyme complex	1.14E-03
17	GO:0032432: actin filament bundle	1.14E-03
18	GO:0005945: 6-phosphofructokinase complex	1.93E-03
19	GO:0016021: integral component of membrane	2.70E-03
20	GO:0005829: cytosol	2.80E-03
21	GO:0016272: prefoldin complex	2.86E-03
22	GO:0031597: cytosolic proteasome complex	2.86E-03
23	GO:0030173: integral component of Golgi membrane	2.86E-03
24	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.36E-03
25	GO:0009986: cell surface	3.36E-03
26	GO:0031595: nuclear proteasome complex	3.36E-03
27	GO:0000123: histone acetyltransferase complex	3.36E-03
28	GO:0005737: cytoplasm	3.41E-03
29	GO:0005811: lipid particle	4.47E-03
30	GO:0031901: early endosome membrane	5.06E-03
31	GO:0030665: clathrin-coated vesicle membrane	5.68E-03
32	GO:0031902: late endosome membrane	6.30E-03
33	GO:0017119: Golgi transport complex	6.32E-03
34	GO:0005884: actin filament	6.98E-03
35	GO:0030176: integral component of endoplasmic reticulum membrane	9.90E-03
36	GO:0005795: Golgi stack	9.90E-03
37	GO:0009506: plasmodesma	1.44E-02
38	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.58E-02
39	GO:0005886: plasma membrane	1.72E-02
40	GO:0005773: vacuole	2.17E-02
41	GO:0016592: mediator complex	2.28E-02
42	GO:0032580: Golgi cisterna membrane	2.49E-02
43	GO:0005615: extracellular space	2.55E-02
44	GO:0005794: Golgi apparatus	3.11E-02
45	GO:0000325: plant-type vacuole	3.78E-02
46	GO:0005874: microtubule	4.21E-02
47	GO:0031201: SNARE complex	4.56E-02