co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G72190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009583: detection of light stimulus	0.00E+00
2	GO:0007037: vacuolar phosphate transport	0.00E+00
3	GO:0045176: apical protein localization	0.00E+00
4	GO:0071000: response to magnetism	0.00E+00
5	GO:0006573: valine metabolic process	0.00E+00
6	GO:0000372: Group I intron splicing	0.00E+00
7	GO:0036172: thiamine salvage	0.00E+00
8	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
9	GO:0000373: Group II intron splicing	1.42E-05
10	GO:0051510: regulation of unidimensional cell growth	2.24E-04
11	GO:0090548: response to nitrate starvation	2.87E-04
12	GO:0000066: mitochondrial ornithine transport	2.87E-04
13	GO:0050801: ion homeostasis	2.87E-04
14	GO:0034757: negative regulation of iron ion transport	2.87E-04
15	GO:0006419: alanyl-tRNA aminoacylation	2.87E-04
16	GO:0009090: homoserine biosynthetic process	2.87E-04
17	GO:1902025: nitrate import	2.87E-04
18	GO:0000012: single strand break repair	2.87E-04
19	GO:0043266: regulation of potassium ion transport	2.87E-04
20	GO:0006551: leucine metabolic process	2.87E-04
21	GO:0072387: flavin adenine dinucleotide metabolic process	2.87E-04
22	GO:2000021: regulation of ion homeostasis	2.87E-04
23	GO:0043609: regulation of carbon utilization	2.87E-04
24	GO:0010343: singlet oxygen-mediated programmed cell death	6.30E-04
25	GO:1901529: positive regulation of anion channel activity	6.30E-04
26	GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole	6.30E-04
27	GO:1900871: chloroplast mRNA modification	6.30E-04
28	GO:0010617: circadian regulation of calcium ion oscillation	6.30E-04
29	GO:0006435: threonyl-tRNA aminoacylation	6.30E-04
30	GO:0010271: regulation of chlorophyll catabolic process	6.30E-04
31	GO:0006432: phenylalanyl-tRNA aminoacylation	6.30E-04
32	GO:0099402: plant organ development	6.30E-04
33	GO:0080009: mRNA methylation	6.30E-04
34	GO:0030029: actin filament-based process	1.02E-03
35	GO:0010447: response to acidic pH	1.02E-03
36	GO:1902448: positive regulation of shade avoidance	1.02E-03
37	GO:0006000: fructose metabolic process	1.02E-03
38	GO:0080117: secondary growth	1.02E-03
39	GO:1901672: positive regulation of systemic acquired resistance	1.02E-03
40	GO:0009793: embryo development ending in seed dormancy	1.06E-03
41	GO:0009451: RNA modification	1.36E-03
42	GO:0009067: aspartate family amino acid biosynthetic process	1.46E-03
43	GO:0051513: regulation of monopolar cell growth	1.46E-03
44	GO:0051639: actin filament network formation	1.46E-03
45	GO:0010239: chloroplast mRNA processing	1.46E-03
46	GO:0044211: CTP salvage	1.46E-03
47	GO:0009800: cinnamic acid biosynthetic process	1.46E-03
48	GO:0042989: sequestering of actin monomers	1.46E-03
49	GO:1901332: negative regulation of lateral root development	1.46E-03
50	GO:2000904: regulation of starch metabolic process	1.46E-03
51	GO:0046836: glycolipid transport	1.46E-03
52	GO:0051764: actin crosslink formation	1.96E-03
53	GO:0048442: sepal development	1.96E-03
54	GO:0008295: spermidine biosynthetic process	1.96E-03
55	GO:0044206: UMP salvage	1.96E-03
56	GO:0006021: inositol biosynthetic process	1.96E-03
57	GO:1902347: response to strigolactone	1.96E-03
58	GO:0009229: thiamine diphosphate biosynthetic process	2.50E-03
59	GO:0010158: abaxial cell fate specification	2.50E-03
60	GO:0080110: sporopollenin biosynthetic process	2.50E-03
61	GO:0016131: brassinosteroid metabolic process	2.50E-03
62	GO:0030041: actin filament polymerization	2.50E-03
63	GO:0010117: photoprotection	2.50E-03
64	GO:0046283: anthocyanin-containing compound metabolic process	2.50E-03
65	GO:0048827: phyllome development	3.08E-03
66	GO:0060918: auxin transport	3.08E-03
67	GO:1901371: regulation of leaf morphogenesis	3.08E-03
68	GO:0006559: L-phenylalanine catabolic process	3.08E-03
69	GO:0006206: pyrimidine nucleobase metabolic process	3.08E-03
70	GO:0048831: regulation of shoot system development	3.08E-03
71	GO:0010190: cytochrome b6f complex assembly	3.08E-03
72	GO:0009228: thiamine biosynthetic process	3.08E-03
73	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	3.08E-03
74	GO:0010310: regulation of hydrogen peroxide metabolic process	3.71E-03
75	GO:2000067: regulation of root morphogenesis	3.71E-03
76	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.71E-03
77	GO:0010076: maintenance of floral meristem identity	3.71E-03
78	GO:0009082: branched-chain amino acid biosynthetic process	3.71E-03
79	GO:0048509: regulation of meristem development	3.71E-03
80	GO:0009099: valine biosynthetic process	3.71E-03
81	GO:0009088: threonine biosynthetic process	3.71E-03
82	GO:0009416: response to light stimulus	4.24E-03
83	GO:0010050: vegetative phase change	4.38E-03
84	GO:0010098: suspensor development	4.38E-03
85	GO:0006400: tRNA modification	4.38E-03
86	GO:0000105: histidine biosynthetic process	5.08E-03
87	GO:0030091: protein repair	5.08E-03
88	GO:0009850: auxin metabolic process	5.08E-03
89	GO:0070413: trehalose metabolism in response to stress	5.08E-03
90	GO:0006002: fructose 6-phosphate metabolic process	5.82E-03
91	GO:0071482: cellular response to light stimulus	5.82E-03
92	GO:0009827: plant-type cell wall modification	5.82E-03
93	GO:0009097: isoleucine biosynthetic process	5.82E-03
94	GO:0032544: plastid translation	5.82E-03
95	GO:0000160: phosphorelay signal transduction system	6.45E-03
96	GO:0006098: pentose-phosphate shunt	6.60E-03
97	GO:0090305: nucleic acid phosphodiester bond hydrolysis	6.60E-03
98	GO:1900426: positive regulation of defense response to bacterium	7.41E-03
99	GO:0009638: phototropism	7.41E-03
100	GO:0010018: far-red light signaling pathway	7.41E-03
101	GO:0009086: methionine biosynthetic process	7.41E-03
102	GO:1900865: chloroplast RNA modification	7.41E-03
103	GO:0016571: histone methylation	7.41E-03
104	GO:0016573: histone acetylation	7.41E-03
105	GO:0006259: DNA metabolic process	8.26E-03
106	GO:0048441: petal development	8.26E-03
107	GO:0006535: cysteine biosynthetic process from serine	8.26E-03
108	GO:0006839: mitochondrial transport	8.87E-03
109	GO:0006265: DNA topological change	9.14E-03
110	GO:0009089: lysine biosynthetic process via diaminopimelate	9.14E-03
111	GO:0006415: translational termination	9.14E-03
112	GO:0006790: sulfur compound metabolic process	1.01E-02
113	GO:0010582: floral meristem determinacy	1.01E-02
114	GO:0010075: regulation of meristem growth	1.10E-02
115	GO:0006094: gluconeogenesis	1.10E-02
116	GO:0009785: blue light signaling pathway	1.10E-02
117	GO:0010229: inflorescence development	1.10E-02
118	GO:0009636: response to toxic substance	1.13E-02
119	GO:0009658: chloroplast organization	1.19E-02
120	GO:0010540: basipetal auxin transport	1.20E-02
121	GO:0009266: response to temperature stimulus	1.20E-02
122	GO:0006302: double-strand break repair	1.20E-02
123	GO:0048440: carpel development	1.20E-02
124	GO:0010207: photosystem II assembly	1.20E-02
125	GO:0046854: phosphatidylinositol phosphorylation	1.30E-02
126	GO:0010039: response to iron ion	1.30E-02
127	GO:0090351: seedling development	1.30E-02
128	GO:0006364: rRNA processing	1.36E-02
129	GO:0009736: cytokinin-activated signaling pathway	1.36E-02
130	GO:0042753: positive regulation of circadian rhythm	1.40E-02
131	GO:0006863: purine nucleobase transport	1.40E-02
132	GO:0005992: trehalose biosynthetic process	1.51E-02
133	GO:0019344: cysteine biosynthetic process	1.51E-02
134	GO:0030150: protein import into mitochondrial matrix	1.51E-02
135	GO:0006338: chromatin remodeling	1.51E-02
136	GO:0007010: cytoskeleton organization	1.51E-02
137	GO:0051017: actin filament bundle assembly	1.51E-02
138	GO:0006289: nucleotide-excision repair	1.51E-02
139	GO:2000377: regulation of reactive oxygen species metabolic process	1.51E-02
140	GO:0010073: meristem maintenance	1.62E-02
141	GO:0048316: seed development	1.66E-02
142	GO:0016226: iron-sulfur cluster assembly	1.85E-02
143	GO:0071215: cellular response to abscisic acid stimulus	1.96E-02
144	GO:0010584: pollen exine formation	2.08E-02
145	GO:0048443: stamen development	2.08E-02
146	GO:0016117: carotenoid biosynthetic process	2.21E-02
147	GO:0070417: cellular response to cold	2.21E-02
148	GO:0010118: stomatal movement	2.33E-02
149	GO:0010087: phloem or xylem histogenesis	2.33E-02
150	GO:0046323: glucose import	2.46E-02
151	GO:0009741: response to brassinosteroid	2.46E-02
152	GO:0010268: brassinosteroid homeostasis	2.46E-02
153	GO:0045489: pectin biosynthetic process	2.46E-02
154	GO:0009958: positive gravitropism	2.46E-02
155	GO:0048868: pollen tube development	2.46E-02
156	GO:0042752: regulation of circadian rhythm	2.59E-02
157	GO:0007059: chromosome segregation	2.59E-02
158	GO:0009646: response to absence of light	2.59E-02
159	GO:0048544: recognition of pollen	2.59E-02
160	GO:0009845: seed germination	2.63E-02
161	GO:0055072: iron ion homeostasis	2.72E-02
162	GO:0048825: cotyledon development	2.72E-02
163	GO:0055114: oxidation-reduction process	2.88E-02
164	GO:0007264: small GTPase mediated signal transduction	3.00E-02
165	GO:0040008: regulation of growth	3.20E-02
166	GO:0009639: response to red or far red light	3.28E-02
167	GO:0006464: cellular protein modification process	3.28E-02
168	GO:0009911: positive regulation of flower development	3.72E-02
169	GO:0001666: response to hypoxia	3.72E-02
170	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.86E-02
171	GO:0010029: regulation of seed germination	3.86E-02
172	GO:0030244: cellulose biosynthetic process	4.49E-02
173	GO:0018298: protein-chromophore linkage	4.49E-02
174	GO:0009834: plant-type secondary cell wall biogenesis	4.81E-02
175	GO:0006499: N-terminal protein myristoylation	4.81E-02
176	GO:0006811: ion transport	4.81E-02
177	GO:0010218: response to far red light	4.81E-02
178	GO:0009910: negative regulation of flower development	4.97E-02
179	GO:0048527: lateral root development	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
2	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
3	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
4	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
5	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
6	GO:0004401: histidinol-phosphatase activity	0.00E+00
7	GO:0004417: hydroxyethylthiazole kinase activity	0.00E+00
8	GO:0010347: L-galactose-1-phosphate phosphatase activity	2.87E-04
9	GO:0005227: calcium activated cation channel activity	2.87E-04
10	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.87E-04
11	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	2.87E-04
12	GO:0004813: alanine-tRNA ligase activity	2.87E-04
13	GO:0005290: L-histidine transmembrane transporter activity	2.87E-04
14	GO:0003984: acetolactate synthase activity	2.87E-04
15	GO:0008395: steroid hydroxylase activity	2.87E-04
16	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.87E-04
17	GO:0016597: amino acid binding	5.36E-04
18	GO:0080041: ADP-ribose pyrophosphohydrolase activity	6.30E-04
19	GO:0004047: aminomethyltransferase activity	6.30E-04
20	GO:0004766: spermidine synthase activity	6.30E-04
21	GO:0052832: inositol monophosphate 3-phosphatase activity	6.30E-04
22	GO:0008805: carbon-monoxide oxygenase activity	6.30E-04
23	GO:0008934: inositol monophosphate 1-phosphatase activity	6.30E-04
24	GO:0052833: inositol monophosphate 4-phosphatase activity	6.30E-04
25	GO:0000064: L-ornithine transmembrane transporter activity	6.30E-04
26	GO:0004826: phenylalanine-tRNA ligase activity	6.30E-04
27	GO:0004412: homoserine dehydrogenase activity	6.30E-04
28	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	6.30E-04
29	GO:0004829: threonine-tRNA ligase activity	6.30E-04
30	GO:0050736: O-malonyltransferase activity	6.30E-04
31	GO:0009884: cytokinin receptor activity	6.30E-04
32	GO:0050017: L-3-cyanoalanine synthase activity	6.30E-04
33	GO:0017118: lipoyltransferase activity	6.30E-04
34	GO:0000049: tRNA binding	7.66E-04
35	GO:0045548: phenylalanine ammonia-lyase activity	1.02E-03
36	GO:0004148: dihydrolipoyl dehydrogenase activity	1.02E-03
37	GO:0032549: ribonucleoside binding	1.02E-03
38	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.02E-03
39	GO:0016805: dipeptidase activity	1.02E-03
40	GO:0005034: osmosensor activity	1.02E-03
41	GO:0001872: (1->3)-beta-D-glucan binding	1.46E-03
42	GO:0015189: L-lysine transmembrane transporter activity	1.46E-03
43	GO:0017089: glycolipid transporter activity	1.46E-03
44	GO:0004072: aspartate kinase activity	1.46E-03
45	GO:0005354: galactose transmembrane transporter activity	1.46E-03
46	GO:0015181: arginine transmembrane transporter activity	1.46E-03
47	GO:0017172: cysteine dioxygenase activity	1.46E-03
48	GO:0009882: blue light photoreceptor activity	1.46E-03
49	GO:0004845: uracil phosphoribosyltransferase activity	1.96E-03
50	GO:0051861: glycolipid binding	1.96E-03
51	GO:0070628: proteasome binding	1.96E-03
52	GO:0042277: peptide binding	1.96E-03
53	GO:0003785: actin monomer binding	2.50E-03
54	GO:0005471: ATP:ADP antiporter activity	2.50E-03
55	GO:2001070: starch binding	3.08E-03
56	GO:0004332: fructose-bisphosphate aldolase activity	3.08E-03
57	GO:0031593: polyubiquitin binding	3.08E-03
58	GO:0000293: ferric-chelate reductase activity	3.08E-03
59	GO:0004462: lactoylglutathione lyase activity	3.08E-03
60	GO:0004518: nuclease activity	3.48E-03
61	GO:0004124: cysteine synthase activity	3.71E-03
62	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.71E-03
63	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.71E-03
64	GO:0004849: uridine kinase activity	3.71E-03
65	GO:0004656: procollagen-proline 4-dioxygenase activity	3.71E-03
66	GO:0019900: kinase binding	3.71E-03
67	GO:0019843: rRNA binding	4.52E-03
68	GO:0043022: ribosome binding	5.08E-03
69	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	5.82E-03
70	GO:0003747: translation release factor activity	6.60E-03
71	GO:0071949: FAD binding	6.60E-03
72	GO:0004519: endonuclease activity	7.31E-03
73	GO:0004673: protein histidine kinase activity	8.26E-03
74	GO:0004805: trehalose-phosphatase activity	8.26E-03
75	GO:0005089: Rho guanyl-nucleotide exchange factor activity	9.14E-03
76	GO:0001054: RNA polymerase I activity	9.14E-03
77	GO:0042802: identical protein binding	9.25E-03
78	GO:0003723: RNA binding	1.01E-02
79	GO:0000155: phosphorelay sensor kinase activity	1.10E-02
80	GO:0009982: pseudouridine synthase activity	1.10E-02
81	GO:0015266: protein channel activity	1.10E-02
82	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.40E-02
83	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.40E-02
84	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.40E-02
85	GO:0003690: double-stranded DNA binding	1.41E-02
86	GO:0046872: metal ion binding	1.49E-02
87	GO:0031418: L-ascorbic acid binding	1.51E-02
88	GO:0004857: enzyme inhibitor activity	1.51E-02
89	GO:0043130: ubiquitin binding	1.51E-02
90	GO:0043424: protein histidine kinase binding	1.62E-02
91	GO:0005345: purine nucleobase transmembrane transporter activity	1.62E-02
92	GO:0016740: transferase activity	2.07E-02
93	GO:0008536: Ran GTPase binding	2.46E-02
94	GO:0004527: exonuclease activity	2.46E-02
95	GO:0005355: glucose transmembrane transporter activity	2.59E-02
96	GO:0010181: FMN binding	2.59E-02
97	GO:0050662: coenzyme binding	2.59E-02
98	GO:0019901: protein kinase binding	2.72E-02
99	GO:0048038: quinone binding	2.86E-02
100	GO:0000156: phosphorelay response regulator activity	3.13E-02
101	GO:0051015: actin filament binding	3.13E-02
102	GO:0005525: GTP binding	3.21E-02
103	GO:0003684: damaged DNA binding	3.28E-02
104	GO:0016791: phosphatase activity	3.28E-02
105	GO:0008237: metallopeptidase activity	3.42E-02
106	GO:0005200: structural constituent of cytoskeleton	3.42E-02
107	GO:0016413: O-acetyltransferase activity	3.57E-02
108	GO:0030247: polysaccharide binding	4.17E-02
109	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.49E-02
110	GO:0004222: metalloendopeptidase activity	4.81E-02
111	GO:0050897: cobalt ion binding	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0009537: proplastid	0.00E+00
2	GO:0005948: acetolactate synthase complex	0.00E+00
3	GO:0009507: chloroplast	1.12E-10
4	GO:0009513: etioplast	6.30E-04
5	GO:0016605: PML body	1.02E-03
6	GO:0009509: chromoplast	1.02E-03
7	GO:0032432: actin filament bundle	1.46E-03
8	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.96E-03
9	GO:0048226: Casparian strip	5.08E-03
10	GO:0009501: amyloplast	5.08E-03
11	GO:0031305: integral component of mitochondrial inner membrane	5.08E-03
12	GO:0005736: DNA-directed RNA polymerase I complex	6.60E-03
13	GO:0016604: nuclear body	7.41E-03
14	GO:0005884: actin filament	9.14E-03
15	GO:0005938: cell cortex	1.10E-02
16	GO:0030095: chloroplast photosystem II	1.20E-02
17	GO:0009570: chloroplast stroma	1.48E-02
18	GO:0009654: photosystem II oxygen evolving complex	1.62E-02
19	GO:0042651: thylakoid membrane	1.62E-02
20	GO:0009532: plastid stroma	1.73E-02
21	GO:0015629: actin cytoskeleton	1.96E-02
22	GO:0009536: plastid	2.05E-02
23	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.08E-02
24	GO:0005770: late endosome	2.46E-02
25	GO:0019898: extrinsic component of membrane	2.72E-02
26	GO:0031965: nuclear membrane	2.72E-02
27	GO:0005759: mitochondrial matrix	3.05E-02
28	GO:0009705: plant-type vacuole membrane	3.35E-02
29	GO:0009295: nucleoid	3.42E-02
30	GO:0005768: endosome	3.72E-02
31	GO:0030529: intracellular ribonucleoprotein complex	3.72E-02
32	GO:0009707: chloroplast outer membrane	4.49E-02
33	GO:0000151: ubiquitin ligase complex	4.49E-02