co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G70690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0052386: cell wall thickening	0.00E+00
2	GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress	0.00E+00
3	GO:0080149: sucrose induced translational repression	0.00E+00
4	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
5	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
6	GO:2000068: regulation of defense response to insect	0.00E+00
7	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
8	GO:0005993: trehalose catabolic process	0.00E+00
9	GO:0007275: multicellular organism development	2.08E-04
10	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.13E-04
11	GO:1990022: RNA polymerase III complex localization to nucleus	2.13E-04
12	GO:0044376: RNA polymerase II complex import to nucleus	2.13E-04
13	GO:0046246: terpene biosynthetic process	2.13E-04
14	GO:0051090: regulation of sequence-specific DNA binding transcription factor activity	2.13E-04
15	GO:0019478: D-amino acid catabolic process	2.13E-04
16	GO:0006680: glucosylceramide catabolic process	2.13E-04
17	GO:1903648: positive regulation of chlorophyll catabolic process	2.13E-04
18	GO:0035266: meristem growth	2.13E-04
19	GO:0000077: DNA damage checkpoint	2.13E-04
20	GO:0007292: female gamete generation	2.13E-04
21	GO:0042350: GDP-L-fucose biosynthetic process	2.13E-04
22	GO:1990641: response to iron ion starvation	2.13E-04
23	GO:0008202: steroid metabolic process	3.26E-04
24	GO:0016192: vesicle-mediated transport	3.97E-04
25	GO:0040020: regulation of meiotic nuclear division	4.76E-04
26	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	4.76E-04
27	GO:0006101: citrate metabolic process	4.76E-04
28	GO:0051788: response to misfolded protein	4.76E-04
29	GO:0009156: ribonucleoside monophosphate biosynthetic process	4.76E-04
30	GO:0006597: spermine biosynthetic process	4.76E-04
31	GO:0006568: tryptophan metabolic process	4.76E-04
32	GO:0009805: coumarin biosynthetic process	4.76E-04
33	GO:0042853: L-alanine catabolic process	4.76E-04
34	GO:0045037: protein import into chloroplast stroma	5.07E-04
35	GO:0090351: seedling development	7.24E-04
36	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	7.74E-04
37	GO:0010253: UDP-rhamnose biosynthetic process	7.74E-04
38	GO:0032504: multicellular organism reproduction	7.74E-04
39	GO:0010476: gibberellin mediated signaling pathway	7.74E-04
40	GO:0010325: raffinose family oligosaccharide biosynthetic process	7.74E-04
41	GO:0009410: response to xenobiotic stimulus	7.74E-04
42	GO:0060968: regulation of gene silencing	7.74E-04
43	GO:0009226: nucleotide-sugar biosynthetic process	1.10E-03
44	GO:0009963: positive regulation of flavonoid biosynthetic process	1.10E-03
45	GO:0071323: cellular response to chitin	1.10E-03
46	GO:0071786: endoplasmic reticulum tubular network organization	1.10E-03
47	GO:0080024: indolebutyric acid metabolic process	1.10E-03
48	GO:0055070: copper ion homeostasis	1.10E-03
49	GO:0051639: actin filament network formation	1.10E-03
50	GO:0030433: ubiquitin-dependent ERAD pathway	1.17E-03
51	GO:0006621: protein retention in ER lumen	1.47E-03
52	GO:0015867: ATP transport	1.47E-03
53	GO:0009165: nucleotide biosynthetic process	1.47E-03
54	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.47E-03
55	GO:0051764: actin crosslink formation	1.47E-03
56	GO:1902584: positive regulation of response to water deprivation	1.47E-03
57	GO:0045927: positive regulation of growth	1.87E-03
58	GO:0009738: abscisic acid-activated signaling pathway	1.87E-03
59	GO:0006097: glyoxylate cycle	1.87E-03
60	GO:0010315: auxin efflux	2.31E-03
61	GO:0006596: polyamine biosynthetic process	2.31E-03
62	GO:0006014: D-ribose metabolic process	2.31E-03
63	GO:0009759: indole glucosinolate biosynthetic process	2.31E-03
64	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.31E-03
65	GO:0015866: ADP transport	2.31E-03
66	GO:0048827: phyllome development	2.31E-03
67	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.31E-03
68	GO:0048232: male gamete generation	2.31E-03
69	GO:0006555: methionine metabolic process	2.31E-03
70	GO:0043248: proteasome assembly	2.31E-03
71	GO:0006886: intracellular protein transport	2.55E-03
72	GO:0034389: lipid particle organization	2.77E-03
73	GO:0017148: negative regulation of translation	2.77E-03
74	GO:0080113: regulation of seed growth	2.77E-03
75	GO:0048444: floral organ morphogenesis	2.77E-03
76	GO:0019509: L-methionine salvage from methylthioadenosine	2.77E-03
77	GO:0030643: cellular phosphate ion homeostasis	2.77E-03
78	GO:0015031: protein transport	3.11E-03
79	GO:0006457: protein folding	3.13E-03
80	GO:0009816: defense response to bacterium, incompatible interaction	3.25E-03
81	GO:1900057: positive regulation of leaf senescence	3.26E-03
82	GO:0010044: response to aluminum ion	3.26E-03
83	GO:0006744: ubiquinone biosynthetic process	3.26E-03
84	GO:0080186: developmental vegetative growth	3.26E-03
85	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.78E-03
86	GO:0006605: protein targeting	3.78E-03
87	GO:0010078: maintenance of root meristem identity	3.78E-03
88	GO:0006102: isocitrate metabolic process	3.78E-03
89	GO:0007155: cell adhesion	3.78E-03
90	GO:0016311: dephosphorylation	3.81E-03
91	GO:0010417: glucuronoxylan biosynthetic process	4.33E-03
92	GO:0030968: endoplasmic reticulum unfolded protein response	4.33E-03
93	GO:0009699: phenylpropanoid biosynthetic process	4.33E-03
94	GO:0006002: fructose 6-phosphate metabolic process	4.33E-03
95	GO:0015996: chlorophyll catabolic process	4.33E-03
96	GO:0006499: N-terminal protein myristoylation	4.41E-03
97	GO:0010332: response to gamma radiation	4.90E-03
98	GO:0009056: catabolic process	4.90E-03
99	GO:0015780: nucleotide-sugar transport	4.90E-03
100	GO:0007338: single fertilization	4.90E-03
101	GO:0045087: innate immune response	5.07E-03
102	GO:0000103: sulfate assimilation	6.12E-03
103	GO:0009688: abscisic acid biosynthetic process	6.12E-03
104	GO:0048829: root cap development	6.12E-03
105	GO:0016441: posttranscriptional gene silencing	6.12E-03
106	GO:0051555: flavonol biosynthetic process	6.12E-03
107	GO:0010015: root morphogenesis	6.77E-03
108	GO:0000266: mitochondrial fission	7.44E-03
109	GO:0030036: actin cytoskeleton organization	8.13E-03
110	GO:0055046: microgametogenesis	8.13E-03
111	GO:0009933: meristem structural organization	8.84E-03
112	GO:0034605: cellular response to heat	8.84E-03
113	GO:0010053: root epidermal cell differentiation	9.58E-03
114	GO:0009225: nucleotide-sugar metabolic process	9.58E-03
115	GO:0034976: response to endoplasmic reticulum stress	1.03E-02
116	GO:0000162: tryptophan biosynthetic process	1.03E-02
117	GO:0006096: glycolytic process	1.04E-02
118	GO:0009863: salicylic acid mediated signaling pathway	1.11E-02
119	GO:0030150: protein import into mitochondrial matrix	1.11E-02
120	GO:0051017: actin filament bundle assembly	1.11E-02
121	GO:0009116: nucleoside metabolic process	1.11E-02
122	GO:0008299: isoprenoid biosynthetic process	1.19E-02
123	GO:0006366: transcription from RNA polymerase II promoter	1.27E-02
124	GO:0016114: terpenoid biosynthetic process	1.27E-02
125	GO:0006511: ubiquitin-dependent protein catabolic process	1.27E-02
126	GO:0019915: lipid storage	1.27E-02
127	GO:0009269: response to desiccation	1.27E-02
128	GO:0009814: defense response, incompatible interaction	1.36E-02
129	GO:0019748: secondary metabolic process	1.36E-02
130	GO:0030245: cellulose catabolic process	1.36E-02
131	GO:0055114: oxidation-reduction process	1.44E-02
132	GO:0009411: response to UV	1.45E-02
133	GO:0046686: response to cadmium ion	1.47E-02
134	GO:0009408: response to heat	1.48E-02
135	GO:0042127: regulation of cell proliferation	1.53E-02
136	GO:0009058: biosynthetic process	1.66E-02
137	GO:0010051: xylem and phloem pattern formation	1.72E-02
138	GO:0010118: stomatal movement	1.72E-02
139	GO:0045489: pectin biosynthetic process	1.81E-02
140	GO:0006662: glycerol ether metabolic process	1.81E-02
141	GO:0010182: sugar mediated signaling pathway	1.81E-02
142	GO:0009790: embryo development	1.84E-02
143	GO:0006623: protein targeting to vacuole	2.00E-02
144	GO:0019252: starch biosynthetic process	2.00E-02
145	GO:0006891: intra-Golgi vesicle-mediated transport	2.10E-02
146	GO:0006635: fatty acid beta-oxidation	2.10E-02
147	GO:0019760: glucosinolate metabolic process	2.41E-02
148	GO:0009567: double fertilization forming a zygote and endosperm	2.41E-02
149	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.44E-02
150	GO:0001666: response to hypoxia	2.73E-02
151	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.84E-02
152	GO:0009555: pollen development	3.05E-02
153	GO:0048573: photoperiodism, flowering	3.07E-02
154	GO:0010311: lateral root formation	3.42E-02
155	GO:0048767: root hair elongation	3.42E-02
156	GO:0045893: positive regulation of transcription, DNA-templated	3.62E-02
157	GO:0009860: pollen tube growth	3.63E-02
158	GO:0010043: response to zinc ion	3.66E-02
159	GO:0009867: jasmonic acid mediated signaling pathway	3.91E-02
160	GO:0016051: carbohydrate biosynthetic process	3.91E-02
161	GO:0034599: cellular response to oxidative stress	4.03E-02
162	GO:0006099: tricarboxylic acid cycle	4.03E-02
163	GO:0006839: mitochondrial transport	4.29E-02
164	GO:0006631: fatty acid metabolic process	4.41E-02
165	GO:0044550: secondary metabolite biosynthetic process	4.53E-02
166	GO:0042542: response to hydrogen peroxide	4.55E-02
167	GO:0010114: response to red light	4.68E-02
168	GO:0009744: response to sucrose	4.68E-02
169	GO:0000209: protein polyubiquitination	4.81E-02
170	GO:0045454: cell redox homeostasis	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
2	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
3	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
4	GO:0005046: KDEL sequence binding	0.00E+00
5	GO:0061133: endopeptidase activator activity	0.00E+00
6	GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity	0.00E+00
7	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
8	GO:0016504: peptidase activator activity	0.00E+00
9	GO:0034338: short-chain carboxylesterase activity	0.00E+00
10	GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity	0.00E+00
11	GO:0070577: lysine-acetylated histone binding	0.00E+00
12	GO:0070628: proteasome binding	3.29E-05
13	GO:0008320: protein transmembrane transporter activity	1.42E-04
14	GO:0004348: glucosylceramidase activity	2.13E-04
15	GO:0016768: spermine synthase activity	2.13E-04
16	GO:0102293: pheophytinase b activity	2.13E-04
17	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	2.13E-04
18	GO:0009000: selenocysteine lyase activity	2.13E-04
19	GO:0050577: GDP-L-fucose synthase activity	2.13E-04
20	GO:0015927: trehalase activity	2.13E-04
21	GO:0008142: oxysterol binding	2.25E-04
22	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	4.76E-04
23	GO:0000774: adenyl-nucleotide exchange factor activity	4.76E-04
24	GO:0032934: sterol binding	4.76E-04
25	GO:0050377: UDP-glucose 4,6-dehydratase activity	4.76E-04
26	GO:0047746: chlorophyllase activity	4.76E-04
27	GO:0010331: gibberellin binding	4.76E-04
28	GO:0010297: heteropolysaccharide binding	4.76E-04
29	GO:0008460: dTDP-glucose 4,6-dehydratase activity	4.76E-04
30	GO:0003994: aconitate hydratase activity	4.76E-04
31	GO:0004766: spermidine synthase activity	4.76E-04
32	GO:0010280: UDP-L-rhamnose synthase activity	4.76E-04
33	GO:0050347: trans-octaprenyltranstransferase activity	4.76E-04
34	GO:0000975: regulatory region DNA binding	7.74E-04
35	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	7.74E-04
36	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	7.74E-04
37	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.10E-03
38	GO:0005460: UDP-glucose transmembrane transporter activity	1.10E-03
39	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.10E-03
40	GO:0004749: ribose phosphate diphosphokinase activity	1.10E-03
41	GO:0005524: ATP binding	1.38E-03
42	GO:0004659: prenyltransferase activity	1.47E-03
43	GO:0004834: tryptophan synthase activity	1.47E-03
44	GO:0046923: ER retention sequence binding	1.47E-03
45	GO:0016887: ATPase activity	1.56E-03
46	GO:0016853: isomerase activity	1.86E-03
47	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.87E-03
48	GO:0004623: phospholipase A2 activity	1.87E-03
49	GO:0030151: molybdenum ion binding	1.87E-03
50	GO:0005459: UDP-galactose transmembrane transporter activity	1.87E-03
51	GO:0036402: proteasome-activating ATPase activity	2.31E-03
52	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.77E-03
53	GO:0004747: ribokinase activity	2.77E-03
54	GO:0005347: ATP transmembrane transporter activity	2.77E-03
55	GO:0004656: procollagen-proline 4-dioxygenase activity	2.77E-03
56	GO:0015217: ADP transmembrane transporter activity	2.77E-03
57	GO:0030170: pyridoxal phosphate binding	2.99E-03
58	GO:0003872: 6-phosphofructokinase activity	3.26E-03
59	GO:0004806: triglyceride lipase activity	3.61E-03
60	GO:0052747: sinapyl alcohol dehydrogenase activity	3.78E-03
61	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.78E-03
62	GO:0008865: fructokinase activity	3.78E-03
63	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.33E-03
64	GO:0004630: phospholipase D activity	4.33E-03
65	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.07E-03
66	GO:0003993: acid phosphatase activity	5.30E-03
67	GO:0045309: protein phosphorylated amino acid binding	5.50E-03
68	GO:0030955: potassium ion binding	5.50E-03
69	GO:0004743: pyruvate kinase activity	5.50E-03
70	GO:0030234: enzyme regulator activity	6.12E-03
71	GO:0019904: protein domain specific binding	6.77E-03
72	GO:0004161: dimethylallyltranstransferase activity	6.77E-03
73	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.44E-03
74	GO:0005388: calcium-transporting ATPase activity	8.13E-03
75	GO:0017025: TBP-class protein binding	9.58E-03
76	GO:0008061: chitin binding	9.58E-03
77	GO:0003712: transcription cofactor activity	9.58E-03
78	GO:0004867: serine-type endopeptidase inhibitor activity	9.58E-03
79	GO:0031625: ubiquitin protein ligase binding	9.75E-03
80	GO:0001046: core promoter sequence-specific DNA binding	1.11E-02
81	GO:0031418: L-ascorbic acid binding	1.11E-02
82	GO:0043130: ubiquitin binding	1.11E-02
83	GO:0051087: chaperone binding	1.19E-02
84	GO:0042803: protein homodimerization activity	1.21E-02
85	GO:0051082: unfolded protein binding	1.26E-02
86	GO:0004722: protein serine/threonine phosphatase activity	1.28E-02
87	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.36E-02
88	GO:0008810: cellulase activity	1.45E-02
89	GO:0003756: protein disulfide isomerase activity	1.53E-02
90	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.62E-02
91	GO:0047134: protein-disulfide reductase activity	1.62E-02
92	GO:0005102: receptor binding	1.62E-02
93	GO:0050662: coenzyme binding	1.91E-02
94	GO:0004791: thioredoxin-disulfide reductase activity	1.91E-02
95	GO:0004872: receptor activity	2.00E-02
96	GO:0005506: iron ion binding	2.25E-02
97	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.31E-02
98	GO:0051015: actin filament binding	2.31E-02
99	GO:0016791: phosphatase activity	2.41E-02
100	GO:0051213: dioxygenase activity	2.73E-02
101	GO:0030247: polysaccharide binding	3.07E-02
102	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.30E-02
103	GO:0000287: magnesium ion binding	3.31E-02
104	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.66E-02
105	GO:0050660: flavin adenine dinucleotide binding	3.89E-02
106	GO:0003746: translation elongation factor activity	3.91E-02
107	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.16E-02
108	GO:0051539: 4 iron, 4 sulfur cluster binding	4.29E-02
109	GO:0061630: ubiquitin protein ligase activity	4.38E-02
110	GO:0030246: carbohydrate binding	4.40E-02
111	GO:0043565: sequence-specific DNA binding	4.45E-02
112	GO:0005507: copper ion binding	4.71E-02
113	GO:0019825: oxygen binding	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0005789: endoplasmic reticulum membrane	3.95E-09
2	GO:0005783: endoplasmic reticulum	1.97E-07
3	GO:0005801: cis-Golgi network	1.08E-04
4	GO:0001405: presequence translocase-associated import motor	2.13E-04
5	GO:0008540: proteasome regulatory particle, base subcomplex	3.26E-04
6	GO:0030134: ER to Golgi transport vesicle	4.76E-04
7	GO:0016021: integral component of membrane	6.87E-04
8	GO:0005774: vacuolar membrane	9.71E-04
9	GO:0032432: actin filament bundle	1.10E-03
10	GO:0030658: transport vesicle membrane	1.10E-03
11	GO:0071782: endoplasmic reticulum tubular network	1.10E-03
12	GO:0005945: 6-phosphofructokinase complex	1.87E-03
13	GO:0005829: cytosol	2.30E-03
14	GO:0005794: Golgi apparatus	2.67E-03
15	GO:0031597: cytosolic proteasome complex	2.77E-03
16	GO:0005788: endoplasmic reticulum lumen	3.25E-03
17	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.26E-03
18	GO:0009986: cell surface	3.26E-03
19	GO:0031595: nuclear proteasome complex	3.26E-03
20	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.78E-03
21	GO:0005779: integral component of peroxisomal membrane	4.33E-03
22	GO:0005811: lipid particle	4.33E-03
23	GO:0005886: plasma membrane	4.89E-03
24	GO:0030665: clathrin-coated vesicle membrane	5.50E-03
25	GO:0031902: late endosome membrane	6.02E-03
26	GO:0017119: Golgi transport complex	6.12E-03
27	GO:0008541: proteasome regulatory particle, lid subcomplex	6.77E-03
28	GO:0005884: actin filament	6.77E-03
29	GO:0000502: proteasome complex	8.80E-03
30	GO:0030176: integral component of endoplasmic reticulum membrane	9.58E-03
31	GO:0005795: Golgi stack	9.58E-03
32	GO:0009506: plasmodesma	1.27E-02
33	GO:0005839: proteasome core complex	1.27E-02
34	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.53E-02
35	GO:0005623: cell	1.62E-02
36	GO:0005737: cytoplasm	1.85E-02
37	GO:0005773: vacuole	1.97E-02
38	GO:0016592: mediator complex	2.20E-02
39	GO:0032580: Golgi cisterna membrane	2.41E-02
40	GO:0005615: extracellular space	2.44E-02
41	GO:0000325: plant-type vacuole	3.66E-02
42	GO:0005874: microtubule	4.03E-02