co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G70280

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:1900037: regulation of cellular response to hypoxia	0.00E+00
3	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
4	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
5	GO:0046620: regulation of organ growth	1.23E-04
6	GO:0034757: negative regulation of iron ion transport	1.64E-04
7	GO:0010582: floral meristem determinacy	3.54E-04
8	GO:0010271: regulation of chlorophyll catabolic process	3.73E-04
9	GO:0080009: mRNA methylation	3.73E-04
10	GO:0080117: secondary growth	6.11E-04
11	GO:0071398: cellular response to fatty acid	6.11E-04
12	GO:0030029: actin filament-based process	6.11E-04
13	GO:0009658: chloroplast organization	7.69E-04
14	GO:0009800: cinnamic acid biosynthetic process	8.73E-04
15	GO:2000904: regulation of starch metabolic process	8.73E-04
16	GO:0010239: chloroplast mRNA processing	8.73E-04
17	GO:0044211: CTP salvage	8.73E-04
18	GO:0006021: inositol biosynthetic process	1.16E-03
19	GO:0009755: hormone-mediated signaling pathway	1.16E-03
20	GO:0044206: UMP salvage	1.16E-03
21	GO:0009733: response to auxin	1.17E-03
22	GO:0016131: brassinosteroid metabolic process	1.47E-03
23	GO:0010438: cellular response to sulfur starvation	1.47E-03
24	GO:0010158: abaxial cell fate specification	1.47E-03
25	GO:0009639: response to red or far red light	1.80E-03
26	GO:0048831: regulation of shoot system development	1.80E-03
27	GO:0003006: developmental process involved in reproduction	1.80E-03
28	GO:0016554: cytidine to uridine editing	1.80E-03
29	GO:0006559: L-phenylalanine catabolic process	1.80E-03
30	GO:0006206: pyrimidine nucleobase metabolic process	1.80E-03
31	GO:0006694: steroid biosynthetic process	2.17E-03
32	GO:0048509: regulation of meristem development	2.17E-03
33	GO:0031930: mitochondria-nucleus signaling pathway	2.17E-03
34	GO:0010098: suspensor development	2.55E-03
35	GO:0010050: vegetative phase change	2.55E-03
36	GO:0000160: phosphorelay signal transduction system	2.93E-03
37	GO:0006402: mRNA catabolic process	2.95E-03
38	GO:0010439: regulation of glucosinolate biosynthetic process	2.95E-03
39	GO:0009850: auxin metabolic process	2.95E-03
40	GO:2000070: regulation of response to water deprivation	2.95E-03
41	GO:0000105: histidine biosynthetic process	2.95E-03
42	GO:0009819: drought recovery	2.95E-03
43	GO:0009734: auxin-activated signaling pathway	3.21E-03
44	GO:0032544: plastid translation	3.37E-03
45	GO:0071482: cellular response to light stimulus	3.37E-03
46	GO:0007186: G-protein coupled receptor signaling pathway	3.37E-03
47	GO:0000373: Group II intron splicing	3.81E-03
48	GO:0048507: meristem development	3.81E-03
49	GO:0016571: histone methylation	4.27E-03
50	GO:0016573: histone acetylation	4.27E-03
51	GO:0010018: far-red light signaling pathway	4.27E-03
52	GO:1900865: chloroplast RNA modification	4.27E-03
53	GO:0009926: auxin polar transport	4.53E-03
54	GO:0010192: mucilage biosynthetic process	4.75E-03
55	GO:0010629: negative regulation of gene expression	4.75E-03
56	GO:0009636: response to toxic substance	5.09E-03
57	GO:0009682: induced systemic resistance	5.25E-03
58	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.77E-03
59	GO:0006790: sulfur compound metabolic process	5.77E-03
60	GO:0005983: starch catabolic process	5.77E-03
61	GO:0045037: protein import into chloroplast stroma	5.77E-03
62	GO:0009736: cytokinin-activated signaling pathway	6.10E-03
63	GO:2000028: regulation of photoperiodism, flowering	6.30E-03
64	GO:0009266: response to temperature stimulus	6.85E-03
65	GO:0048467: gynoecium development	6.85E-03
66	GO:0046854: phosphatidylinositol phosphorylation	7.41E-03
67	GO:0006355: regulation of transcription, DNA-templated	7.98E-03
68	GO:0042753: positive regulation of circadian rhythm	8.00E-03
69	GO:0006863: purine nucleobase transport	8.00E-03
70	GO:0009833: plant-type primary cell wall biogenesis	8.00E-03
71	GO:0005992: trehalose biosynthetic process	8.59E-03
72	GO:0006338: chromatin remodeling	8.59E-03
73	GO:0016226: iron-sulfur cluster assembly	1.05E-02
74	GO:0009625: response to insect	1.11E-02
75	GO:0009693: ethylene biosynthetic process	1.11E-02
76	GO:0071215: cellular response to abscisic acid stimulus	1.11E-02
77	GO:0009686: gibberellin biosynthetic process	1.11E-02
78	GO:0070417: cellular response to cold	1.25E-02
79	GO:0016117: carotenoid biosynthetic process	1.25E-02
80	GO:0010087: phloem or xylem histogenesis	1.32E-02
81	GO:0071555: cell wall organization	1.33E-02
82	GO:0010182: sugar mediated signaling pathway	1.39E-02
83	GO:0009741: response to brassinosteroid	1.39E-02
84	GO:0010268: brassinosteroid homeostasis	1.39E-02
85	GO:0040008: regulation of growth	1.44E-02
86	GO:0009739: response to gibberellin	1.69E-02
87	GO:0010583: response to cyclopentenone	1.70E-02
88	GO:0019761: glucosinolate biosynthetic process	1.70E-02
89	GO:0009416: response to light stimulus	1.92E-02
90	GO:0010029: regulation of seed germination	2.19E-02
91	GO:0010411: xyloglucan metabolic process	2.36E-02
92	GO:0048573: photoperiodism, flowering	2.36E-02
93	GO:0006970: response to osmotic stress	2.51E-02
94	GO:0030244: cellulose biosynthetic process	2.54E-02
95	GO:0009832: plant-type cell wall biogenesis	2.63E-02
96	GO:0006499: N-terminal protein myristoylation	2.72E-02
97	GO:0006811: ion transport	2.72E-02
98	GO:0009910: negative regulation of flower development	2.82E-02
99	GO:0009867: jasmonic acid mediated signaling pathway	3.01E-02
100	GO:0006631: fatty acid metabolic process	3.40E-02
101	GO:0008283: cell proliferation	3.60E-02
102	GO:0010114: response to red light	3.60E-02
103	GO:0007275: multicellular organism development	3.62E-02
104	GO:0042546: cell wall biogenesis	3.70E-02
105	GO:0009644: response to high light intensity	3.81E-02
106	GO:0009965: leaf morphogenesis	3.91E-02
107	GO:0006812: cation transport	4.23E-02
108	GO:0006364: rRNA processing	4.45E-02
109	GO:0009585: red, far-red light phototransduction	4.45E-02
110	GO:0009909: regulation of flower development	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
2	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
3	GO:0004401: histidinol-phosphatase activity	0.00E+00
4	GO:0008395: steroid hydroxylase activity	1.64E-04
5	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	1.64E-04
6	GO:0010347: L-galactose-1-phosphate phosphatase activity	1.64E-04
7	GO:0005227: calcium activated cation channel activity	1.64E-04
8	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	1.64E-04
9	GO:0019156: isoamylase activity	3.73E-04
10	GO:0004047: aminomethyltransferase activity	3.73E-04
11	GO:0052832: inositol monophosphate 3-phosphatase activity	3.73E-04
12	GO:0008934: inositol monophosphate 1-phosphatase activity	3.73E-04
13	GO:0052833: inositol monophosphate 4-phosphatase activity	3.73E-04
14	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	3.73E-04
15	GO:0050736: O-malonyltransferase activity	3.73E-04
16	GO:0009884: cytokinin receptor activity	3.73E-04
17	GO:0005034: osmosensor activity	6.11E-04
18	GO:0016707: gibberellin 3-beta-dioxygenase activity	6.11E-04
19	GO:0045548: phenylalanine ammonia-lyase activity	6.11E-04
20	GO:0004148: dihydrolipoyl dehydrogenase activity	6.11E-04
21	GO:0031418: L-ascorbic acid binding	6.27E-04
22	GO:0004845: uracil phosphoribosyltransferase activity	1.16E-03
23	GO:0004523: RNA-DNA hybrid ribonuclease activity	1.47E-03
24	GO:0004556: alpha-amylase activity	1.80E-03
25	GO:0016759: cellulose synthase activity	1.80E-03
26	GO:0004709: MAP kinase kinase kinase activity	1.80E-03
27	GO:0000293: ferric-chelate reductase activity	1.80E-03
28	GO:0004849: uridine kinase activity	2.17E-03
29	GO:0019900: kinase binding	2.17E-03
30	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.17E-03
31	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.81E-03
32	GO:0004673: protein histidine kinase activity	4.75E-03
33	GO:0004805: trehalose-phosphatase activity	4.75E-03
34	GO:0000155: phosphorelay sensor kinase activity	6.30E-03
35	GO:0009982: pseudouridine synthase activity	6.30E-03
36	GO:0003700: transcription factor activity, sequence-specific DNA binding	6.63E-03
37	GO:0004871: signal transducer activity	7.55E-03
38	GO:0003723: RNA binding	7.93E-03
39	GO:0008134: transcription factor binding	8.59E-03
40	GO:0004857: enzyme inhibitor activity	8.59E-03
41	GO:0043424: protein histidine kinase binding	9.21E-03
42	GO:0005345: purine nucleobase transmembrane transporter activity	9.21E-03
43	GO:0003964: RNA-directed DNA polymerase activity	9.84E-03
44	GO:0016760: cellulose synthase (UDP-forming) activity	1.11E-02
45	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.12E-02
46	GO:0005199: structural constituent of cell wall	1.39E-02
47	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.62E-02
48	GO:0004518: nuclease activity	1.70E-02
49	GO:0000156: phosphorelay response regulator activity	1.77E-02
50	GO:0042802: identical protein binding	1.92E-02
51	GO:0005200: structural constituent of cytoskeleton	1.94E-02
52	GO:0051213: dioxygenase activity	2.10E-02
53	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.36E-02
54	GO:0004222: metalloendopeptidase activity	2.72E-02
55	GO:0050897: cobalt ion binding	2.82E-02
56	GO:0003697: single-stranded DNA binding	3.01E-02
57	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.01E-02
58	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.20E-02
59	GO:0004364: glutathione transferase activity	3.50E-02
60	GO:0043621: protein self-association	3.81E-02
61	GO:0004519: endonuclease activity	4.63E-02
62	GO:0031625: ubiquitin protein ligase binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0009537: proplastid	0.00E+00
2	GO:0000408: EKC/KEOPS complex	0.00E+00
3	GO:0009513: etioplast	3.73E-04
4	GO:0009569: chloroplast starch grain	3.73E-04
5	GO:0009509: chromoplast	6.11E-04
6	GO:0009707: chloroplast outer membrane	2.78E-03
7	GO:0009501: amyloplast	2.95E-03
8	GO:0030095: chloroplast photosystem II	6.85E-03
9	GO:0009654: photosystem II oxygen evolving complex	9.21E-03
10	GO:0019898: extrinsic component of membrane	1.54E-02
11	GO:0030529: intracellular ribonucleoprotein complex	2.10E-02
12	GO:0000151: ubiquitin ligase complex	2.54E-02
13	GO:0031977: thylakoid lumen	3.40E-02
14	GO:0009507: chloroplast	3.87E-02