co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G70200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070125: mitochondrial translational elongation	0.00E+00
2	GO:0045176: apical protein localization	0.00E+00
3	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
4	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
5	GO:0000372: Group I intron splicing	0.00E+00
6	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
7	GO:0080127: fruit septum development	0.00E+00
8	GO:1900037: regulation of cellular response to hypoxia	0.00E+00
9	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
10	GO:0046486: glycerolipid metabolic process	0.00E+00
11	GO:0006907: pinocytosis	0.00E+00
12	GO:0000373: Group II intron splicing	4.10E-06
13	GO:0005992: trehalose biosynthetic process	6.33E-04
14	GO:0043609: regulation of carbon utilization	7.13E-04
15	GO:0006436: tryptophanyl-tRNA aminoacylation	7.13E-04
16	GO:0090548: response to nitrate starvation	7.13E-04
17	GO:0000066: mitochondrial ornithine transport	7.13E-04
18	GO:0034757: negative regulation of iron ion transport	7.13E-04
19	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	7.13E-04
20	GO:1902025: nitrate import	7.13E-04
21	GO:0043087: regulation of GTPase activity	7.13E-04
22	GO:0009451: RNA modification	7.33E-04
23	GO:0046620: regulation of organ growth	1.08E-03
24	GO:0007186: G-protein coupled receptor signaling pathway	1.31E-03
25	GO:0009958: positive gravitropism	1.53E-03
26	GO:0006420: arginyl-tRNA aminoacylation	1.54E-03
27	GO:0010271: regulation of chlorophyll catabolic process	1.54E-03
28	GO:0006432: phenylalanyl-tRNA aminoacylation	1.54E-03
29	GO:0006650: glycerophospholipid metabolic process	1.54E-03
30	GO:0001736: establishment of planar polarity	1.54E-03
31	GO:0080009: mRNA methylation	1.54E-03
32	GO:0009786: regulation of asymmetric cell division	1.54E-03
33	GO:0009926: auxin polar transport	1.70E-03
34	GO:0048829: root cap development	2.18E-03
35	GO:0030029: actin filament-based process	2.54E-03
36	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	2.54E-03
37	GO:0045910: negative regulation of DNA recombination	2.54E-03
38	GO:0031022: nuclear migration along microfilament	2.54E-03
39	GO:0006000: fructose metabolic process	2.54E-03
40	GO:0046168: glycerol-3-phosphate catabolic process	2.54E-03
41	GO:0080117: secondary growth	2.54E-03
42	GO:0042780: tRNA 3'-end processing	2.54E-03
43	GO:0045493: xylan catabolic process	2.54E-03
44	GO:0010582: floral meristem determinacy	2.89E-03
45	GO:0009793: embryo development ending in seed dormancy	3.19E-03
46	GO:0045017: glycerolipid biosynthetic process	3.69E-03
47	GO:0051513: regulation of monopolar cell growth	3.69E-03
48	GO:0009102: biotin biosynthetic process	3.69E-03
49	GO:0051639: actin filament network formation	3.69E-03
50	GO:0034059: response to anoxia	3.69E-03
51	GO:0010239: chloroplast mRNA processing	3.69E-03
52	GO:0044211: CTP salvage	3.69E-03
53	GO:0007276: gamete generation	3.69E-03
54	GO:0006072: glycerol-3-phosphate metabolic process	3.69E-03
55	GO:0009800: cinnamic acid biosynthetic process	3.69E-03
56	GO:2000904: regulation of starch metabolic process	3.69E-03
57	GO:0010540: basipetal auxin transport	3.72E-03
58	GO:0009755: hormone-mediated signaling pathway	4.99E-03
59	GO:0051764: actin crosslink formation	4.99E-03
60	GO:0006021: inositol biosynthetic process	4.99E-03
61	GO:0008295: spermidine biosynthetic process	4.99E-03
62	GO:0044206: UMP salvage	4.99E-03
63	GO:0009956: radial pattern formation	4.99E-03
64	GO:0051017: actin filament bundle assembly	5.18E-03
65	GO:0016123: xanthophyll biosynthetic process	6.42E-03
66	GO:0010438: cellular response to sulfur starvation	6.42E-03
67	GO:0010158: abaxial cell fate specification	6.42E-03
68	GO:0080110: sporopollenin biosynthetic process	6.42E-03
69	GO:0009696: salicylic acid metabolic process	6.42E-03
70	GO:0009904: chloroplast accumulation movement	6.42E-03
71	GO:0071215: cellular response to abscisic acid stimulus	7.55E-03
72	GO:0048827: phyllome development	7.97E-03
73	GO:0016554: cytidine to uridine editing	7.97E-03
74	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	7.97E-03
75	GO:0042793: transcription from plastid promoter	7.97E-03
76	GO:0048831: regulation of shoot system development	7.97E-03
77	GO:0006559: L-phenylalanine catabolic process	7.97E-03
78	GO:0006206: pyrimidine nucleobase metabolic process	7.97E-03
79	GO:0003006: developmental process involved in reproduction	7.97E-03
80	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	9.65E-03
81	GO:0048509: regulation of meristem development	9.65E-03
82	GO:0031930: mitochondria-nucleus signaling pathway	9.65E-03
83	GO:0009903: chloroplast avoidance movement	9.65E-03
84	GO:0040008: regulation of growth	9.98E-03
85	GO:0045489: pectin biosynthetic process	1.04E-02
86	GO:0009734: auxin-activated signaling pathway	1.09E-02
87	GO:0007018: microtubule-based movement	1.12E-02
88	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.14E-02
89	GO:0009610: response to symbiotic fungus	1.14E-02
90	GO:0010050: vegetative phase change	1.14E-02
91	GO:0010098: suspensor development	1.14E-02
92	GO:0015693: magnesium ion transport	1.14E-02
93	GO:0045892: negative regulation of transcription, DNA-templated	1.23E-02
94	GO:0000105: histidine biosynthetic process	1.33E-02
95	GO:0009231: riboflavin biosynthetic process	1.33E-02
96	GO:0010439: regulation of glucosinolate biosynthetic process	1.33E-02
97	GO:0009819: drought recovery	1.33E-02
98	GO:0009850: auxin metabolic process	1.33E-02
99	GO:0070413: trehalose metabolism in response to stress	1.33E-02
100	GO:2000070: regulation of response to water deprivation	1.33E-02
101	GO:0010492: maintenance of shoot apical meristem identity	1.33E-02
102	GO:0010583: response to cyclopentenone	1.38E-02
103	GO:0006002: fructose 6-phosphate metabolic process	1.54E-02
104	GO:0071482: cellular response to light stimulus	1.54E-02
105	GO:0009827: plant-type cell wall modification	1.54E-02
106	GO:0009657: plastid organization	1.54E-02
107	GO:0009639: response to red or far red light	1.57E-02
108	GO:0009416: response to light stimulus	1.70E-02
109	GO:0009056: catabolic process	1.75E-02
110	GO:0048507: meristem development	1.75E-02
111	GO:0046916: cellular transition metal ion homeostasis	1.75E-02
112	GO:0010018: far-red light signaling pathway	1.97E-02
113	GO:1900865: chloroplast RNA modification	1.97E-02
114	GO:0016571: histone methylation	1.97E-02
115	GO:0016573: histone acetylation	1.97E-02
116	GO:0009658: chloroplast organization	2.07E-02
117	GO:0009627: systemic acquired resistance	2.10E-02
118	GO:0009641: shade avoidance	2.20E-02
119	GO:0006298: mismatch repair	2.20E-02
120	GO:0010192: mucilage biosynthetic process	2.20E-02
121	GO:0031627: telomeric loop formation	2.20E-02
122	GO:0010629: negative regulation of gene expression	2.20E-02
123	GO:0009299: mRNA transcription	2.20E-02
124	GO:0006535: cysteine biosynthetic process from serine	2.20E-02
125	GO:0010411: xyloglucan metabolic process	2.21E-02
126	GO:0048765: root hair cell differentiation	2.44E-02
127	GO:0009682: induced systemic resistance	2.44E-02
128	GO:0016485: protein processing	2.44E-02
129	GO:0030244: cellulose biosynthetic process	2.46E-02
130	GO:0000160: phosphorelay signal transduction system	2.58E-02
131	GO:0010311: lateral root formation	2.58E-02
132	GO:0006790: sulfur compound metabolic process	2.68E-02
133	GO:0045037: protein import into chloroplast stroma	2.68E-02
134	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.68E-02
135	GO:0071555: cell wall organization	2.69E-02
136	GO:0006499: N-terminal protein myristoylation	2.71E-02
137	GO:0010229: inflorescence development	2.94E-02
138	GO:0009725: response to hormone	2.94E-02
139	GO:0010102: lateral root morphogenesis	2.94E-02
140	GO:0009691: cytokinin biosynthetic process	2.94E-02
141	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.00E-02
142	GO:0009867: jasmonic acid mediated signaling pathway	3.11E-02
143	GO:0009887: animal organ morphogenesis	3.20E-02
144	GO:0009266: response to temperature stimulus	3.20E-02
145	GO:0006302: double-strand break repair	3.20E-02
146	GO:0048467: gynoecium development	3.20E-02
147	GO:0010207: photosystem II assembly	3.20E-02
148	GO:0010020: chloroplast fission	3.20E-02
149	GO:0009933: meristem structural organization	3.20E-02
150	GO:0009733: response to auxin	3.40E-02
151	GO:0046854: phosphatidylinositol phosphorylation	3.48E-02
152	GO:0009825: multidimensional cell growth	3.48E-02
153	GO:0080188: RNA-directed DNA methylation	3.48E-02
154	GO:0006839: mitochondrial transport	3.55E-02
155	GO:0006863: purine nucleobase transport	3.76E-02
156	GO:0009833: plant-type primary cell wall biogenesis	3.76E-02
157	GO:0042753: positive regulation of circadian rhythm	3.76E-02
158	GO:0019344: cysteine biosynthetic process	4.04E-02
159	GO:0030150: protein import into mitochondrial matrix	4.04E-02
160	GO:0006338: chromatin remodeling	4.04E-02
161	GO:0007010: cytoskeleton organization	4.04E-02
162	GO:0006289: nucleotide-excision repair	4.04E-02
163	GO:0042546: cell wall biogenesis	4.17E-02
164	GO:0006418: tRNA aminoacylation for protein translation	4.34E-02
165	GO:0006874: cellular calcium ion homeostasis	4.34E-02
166	GO:0009636: response to toxic substance	4.50E-02
167	GO:0009965: leaf morphogenesis	4.50E-02
168	GO:0006306: DNA methylation	4.64E-02
169	GO:0051321: meiotic cell cycle	4.64E-02
170	GO:0003333: amino acid transmembrane transport	4.64E-02
171	GO:0016226: iron-sulfur cluster assembly	4.94E-02
172	GO:0035428: hexose transmembrane transport	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
2	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
3	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
4	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
5	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
6	GO:0008710: 8-amino-7-oxononanoate synthase activity	0.00E+00
7	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
8	GO:0004401: histidinol-phosphatase activity	0.00E+00
9	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
10	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
11	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
12	GO:0008805: carbon-monoxide oxygenase activity	2.16E-05
13	GO:0001872: (1->3)-beta-D-glucan binding	1.46E-04
14	GO:0004519: endonuclease activity	1.77E-04
15	GO:0004805: trehalose-phosphatase activity	1.96E-04
16	GO:0003723: RNA binding	2.82E-04
17	GO:0010347: L-galactose-1-phosphate phosphatase activity	7.13E-04
18	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	7.13E-04
19	GO:0005227: calcium activated cation channel activity	7.13E-04
20	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	7.13E-04
21	GO:0005290: L-histidine transmembrane transporter activity	7.13E-04
22	GO:0052381: tRNA dimethylallyltransferase activity	7.13E-04
23	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	7.13E-04
24	GO:0004830: tryptophan-tRNA ligase activity	7.13E-04
25	GO:0043425: bHLH transcription factor binding	1.54E-03
26	GO:0004814: arginine-tRNA ligase activity	1.54E-03
27	GO:0010296: prenylcysteine methylesterase activity	1.54E-03
28	GO:0004047: aminomethyltransferase activity	1.54E-03
29	GO:0004766: spermidine synthase activity	1.54E-03
30	GO:0052832: inositol monophosphate 3-phosphatase activity	1.54E-03
31	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.54E-03
32	GO:0008934: inositol monophosphate 1-phosphatase activity	1.54E-03
33	GO:0052833: inositol monophosphate 4-phosphatase activity	1.54E-03
34	GO:0000064: L-ornithine transmembrane transporter activity	1.54E-03
35	GO:0004826: phenylalanine-tRNA ligase activity	1.54E-03
36	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.54E-03
37	GO:0050736: O-malonyltransferase activity	1.54E-03
38	GO:0009884: cytokinin receptor activity	1.54E-03
39	GO:0050017: L-3-cyanoalanine synthase activity	1.54E-03
40	GO:0005034: osmosensor activity	2.54E-03
41	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	2.54E-03
42	GO:0016707: gibberellin 3-beta-dioxygenase activity	2.54E-03
43	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	2.54E-03
44	GO:0045548: phenylalanine ammonia-lyase activity	2.54E-03
45	GO:0003913: DNA photolyase activity	2.54E-03
46	GO:0042781: 3'-tRNA processing endoribonuclease activity	2.54E-03
47	GO:0004148: dihydrolipoyl dehydrogenase activity	2.54E-03
48	GO:0080031: methyl salicylate esterase activity	3.69E-03
49	GO:0015189: L-lysine transmembrane transporter activity	3.69E-03
50	GO:0015181: arginine transmembrane transporter activity	3.69E-03
51	GO:0005096: GTPase activator activity	4.83E-03
52	GO:0004845: uracil phosphoribosyltransferase activity	4.99E-03
53	GO:0010011: auxin binding	4.99E-03
54	GO:0010328: auxin influx transmembrane transporter activity	4.99E-03
55	GO:0070628: proteasome binding	4.99E-03
56	GO:0019199: transmembrane receptor protein kinase activity	4.99E-03
57	GO:0009044: xylan 1,4-beta-xylosidase activity	4.99E-03
58	GO:0004930: G-protein coupled receptor activity	4.99E-03
59	GO:0042277: peptide binding	4.99E-03
60	GO:0046556: alpha-L-arabinofuranosidase activity	4.99E-03
61	GO:0031418: L-ascorbic acid binding	5.18E-03
62	GO:0005471: ATP:ADP antiporter activity	6.42E-03
63	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	6.42E-03
64	GO:0008725: DNA-3-methyladenine glycosylase activity	6.42E-03
65	GO:0004523: RNA-DNA hybrid ribonuclease activity	6.42E-03
66	GO:0005525: GTP binding	6.80E-03
67	GO:0030570: pectate lyase activity	7.55E-03
68	GO:2001070: starch binding	7.97E-03
69	GO:0030983: mismatched DNA binding	7.97E-03
70	GO:0080030: methyl indole-3-acetate esterase activity	7.97E-03
71	GO:0004709: MAP kinase kinase kinase activity	7.97E-03
72	GO:0031593: polyubiquitin binding	7.97E-03
73	GO:0019900: kinase binding	9.65E-03
74	GO:0004124: cysteine synthase activity	9.65E-03
75	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	9.65E-03
76	GO:0016832: aldehyde-lyase activity	9.65E-03
77	GO:0051753: mannan synthase activity	9.65E-03
78	GO:0004849: uridine kinase activity	9.65E-03
79	GO:0004656: procollagen-proline 4-dioxygenase activity	9.65E-03
80	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.10E-02
81	GO:0009881: photoreceptor activity	1.14E-02
82	GO:0004871: signal transducer activity	1.30E-02
83	GO:0004518: nuclease activity	1.38E-02
84	GO:0051015: actin filament binding	1.47E-02
85	GO:0046914: transition metal ion binding	1.54E-02
86	GO:0016759: cellulose synthase activity	1.57E-02
87	GO:0003684: damaged DNA binding	1.57E-02
88	GO:0016413: O-acetyltransferase activity	1.77E-02
89	GO:0003779: actin binding	1.89E-02
90	GO:0004673: protein histidine kinase activity	2.20E-02
91	GO:0030247: polysaccharide binding	2.21E-02
92	GO:0003691: double-stranded telomeric DNA binding	2.44E-02
93	GO:0016301: kinase activity	2.54E-02
94	GO:0000049: tRNA binding	2.68E-02
95	GO:0004222: metalloendopeptidase activity	2.71E-02
96	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.84E-02
97	GO:0015095: magnesium ion transmembrane transporter activity	2.94E-02
98	GO:0000155: phosphorelay sensor kinase activity	2.94E-02
99	GO:0009982: pseudouridine synthase activity	2.94E-02
100	GO:0015266: protein channel activity	2.94E-02
101	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.20E-02
102	GO:0008061: chitin binding	3.48E-02
103	GO:0003712: transcription cofactor activity	3.48E-02
104	GO:0004970: ionotropic glutamate receptor activity	3.48E-02
105	GO:0005217: intracellular ligand-gated ion channel activity	3.48E-02
106	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.76E-02
107	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.76E-02
108	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.76E-02
109	GO:0042803: protein homodimerization activity	3.97E-02
110	GO:0043130: ubiquitin binding	4.04E-02
111	GO:0005528: FK506 binding	4.04E-02
112	GO:0008134: transcription factor binding	4.04E-02
113	GO:0043621: protein self-association	4.33E-02
114	GO:0043424: protein histidine kinase binding	4.34E-02
115	GO:0005345: purine nucleobase transmembrane transporter activity	4.34E-02
116	GO:0008408: 3'-5' exonuclease activity	4.64E-02
117	GO:0003964: RNA-directed DNA polymerase activity	4.64E-02
118	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0035452: extrinsic component of plastid membrane	0.00E+00
2	GO:0000408: EKC/KEOPS complex	0.00E+00
3	GO:0009537: proplastid	0.00E+00
4	GO:0009349: riboflavin synthase complex	0.00E+00
5	GO:0009507: chloroplast	4.83E-05
6	GO:0000791: euchromatin	7.13E-04
7	GO:0009707: chloroplast outer membrane	8.04E-04
8	GO:0009986: cell surface	8.67E-04
9	GO:0009513: etioplast	1.54E-03
10	GO:0030870: Mre11 complex	1.54E-03
11	GO:0009509: chromoplast	2.54E-03
12	GO:0030139: endocytic vesicle	2.54E-03
13	GO:0032585: multivesicular body membrane	3.69E-03
14	GO:0032432: actin filament bundle	3.69E-03
15	GO:0009331: glycerol-3-phosphate dehydrogenase complex	3.69E-03
16	GO:0000795: synaptonemal complex	6.42E-03
17	GO:0005886: plasma membrane	8.33E-03
18	GO:0005871: kinesin complex	8.92E-03
19	GO:0005759: mitochondrial matrix	9.28E-03
20	GO:0009501: amyloplast	1.33E-02
21	GO:0031305: integral component of mitochondrial inner membrane	1.33E-02
22	GO:0000783: nuclear telomere cap complex	1.54E-02
23	GO:0046658: anchored component of plasma membrane	1.64E-02
24	GO:0030529: intracellular ribonucleoprotein complex	1.88E-02
25	GO:0005884: actin filament	2.44E-02
26	GO:0009508: plastid chromosome	2.94E-02
27	GO:0009574: preprophase band	2.94E-02
28	GO:0016602: CCAAT-binding factor complex	2.94E-02
29	GO:0030095: chloroplast photosystem II	3.20E-02
30	GO:0009570: chloroplast stroma	3.53E-02
31	GO:0000419: DNA-directed RNA polymerase V complex	3.76E-02
32	GO:0005875: microtubule associated complex	3.76E-02
33	GO:0009654: photosystem II oxygen evolving complex	4.34E-02
34	GO:0005856: cytoskeleton	4.50E-02
35	GO:0009532: plastid stroma	4.64E-02