GO Enrichment Analysis of Co-expressed Genes with
AT1G69530
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 2 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 3 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 4 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 5 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 6 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 7 | GO:0015979: photosynthesis | 1.16E-06 |
| 8 | GO:0009773: photosynthetic electron transport in photosystem I | 6.06E-06 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.70E-06 |
| 10 | GO:0071484: cellular response to light intensity | 8.70E-06 |
| 11 | GO:0010207: photosystem II assembly | 1.21E-05 |
| 12 | GO:0032544: plastid translation | 1.22E-04 |
| 13 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.87E-04 |
| 14 | GO:0071457: cellular response to ozone | 3.25E-04 |
| 15 | GO:0009405: pathogenesis | 5.33E-04 |
| 16 | GO:0035436: triose phosphate transmembrane transport | 5.33E-04 |
| 17 | GO:2001295: malonyl-CoA biosynthetic process | 5.33E-04 |
| 18 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 7.63E-04 |
| 19 | GO:0010731: protein glutathionylation | 7.63E-04 |
| 20 | GO:0006020: inositol metabolic process | 7.63E-04 |
| 21 | GO:0015713: phosphoglycerate transport | 1.01E-03 |
| 22 | GO:0006546: glycine catabolic process | 1.01E-03 |
| 23 | GO:0006021: inositol biosynthetic process | 1.01E-03 |
| 24 | GO:0006542: glutamine biosynthetic process | 1.01E-03 |
| 25 | GO:0019676: ammonia assimilation cycle | 1.01E-03 |
| 26 | GO:0071486: cellular response to high light intensity | 1.01E-03 |
| 27 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.01E-03 |
| 28 | GO:0006109: regulation of carbohydrate metabolic process | 1.01E-03 |
| 29 | GO:0022622: root system development | 1.01E-03 |
| 30 | GO:0071493: cellular response to UV-B | 1.28E-03 |
| 31 | GO:0006564: L-serine biosynthetic process | 1.28E-03 |
| 32 | GO:0010236: plastoquinone biosynthetic process | 1.28E-03 |
| 33 | GO:0006810: transport | 1.31E-03 |
| 34 | GO:0009228: thiamine biosynthetic process | 1.57E-03 |
| 35 | GO:0046855: inositol phosphate dephosphorylation | 1.57E-03 |
| 36 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.57E-03 |
| 37 | GO:1902456: regulation of stomatal opening | 1.57E-03 |
| 38 | GO:0010190: cytochrome b6f complex assembly | 1.57E-03 |
| 39 | GO:0009643: photosynthetic acclimation | 1.57E-03 |
| 40 | GO:0006751: glutathione catabolic process | 1.57E-03 |
| 41 | GO:0010027: thylakoid membrane organization | 1.74E-03 |
| 42 | GO:1901259: chloroplast rRNA processing | 1.88E-03 |
| 43 | GO:0010189: vitamin E biosynthetic process | 1.88E-03 |
| 44 | GO:0009955: adaxial/abaxial pattern specification | 1.88E-03 |
| 45 | GO:0015995: chlorophyll biosynthetic process | 2.05E-03 |
| 46 | GO:0055114: oxidation-reduction process | 2.17E-03 |
| 47 | GO:0032880: regulation of protein localization | 2.21E-03 |
| 48 | GO:0009735: response to cytokinin | 2.89E-03 |
| 49 | GO:0009657: plastid organization | 2.93E-03 |
| 50 | GO:0019430: removal of superoxide radicals | 2.93E-03 |
| 51 | GO:0071482: cellular response to light stimulus | 2.93E-03 |
| 52 | GO:0010206: photosystem II repair | 3.31E-03 |
| 53 | GO:0009409: response to cold | 4.20E-03 |
| 54 | GO:0006415: translational termination | 4.55E-03 |
| 55 | GO:0019684: photosynthesis, light reaction | 4.55E-03 |
| 56 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.55E-03 |
| 57 | GO:0043085: positive regulation of catalytic activity | 4.55E-03 |
| 58 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.55E-03 |
| 59 | GO:0006790: sulfur compound metabolic process | 4.99E-03 |
| 60 | GO:2000012: regulation of auxin polar transport | 5.45E-03 |
| 61 | GO:0009767: photosynthetic electron transport chain | 5.45E-03 |
| 62 | GO:0006412: translation | 5.46E-03 |
| 63 | GO:0019253: reductive pentose-phosphate cycle | 5.92E-03 |
| 64 | GO:0010143: cutin biosynthetic process | 5.92E-03 |
| 65 | GO:0048367: shoot system development | 6.04E-03 |
| 66 | GO:0046854: phosphatidylinositol phosphorylation | 6.41E-03 |
| 67 | GO:0032259: methylation | 6.73E-03 |
| 68 | GO:0007017: microtubule-based process | 7.95E-03 |
| 69 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.95E-03 |
| 70 | GO:0006418: tRNA aminoacylation for protein translation | 7.95E-03 |
| 71 | GO:0061077: chaperone-mediated protein folding | 8.49E-03 |
| 72 | GO:0016226: iron-sulfur cluster assembly | 9.05E-03 |
| 73 | GO:0009686: gibberellin biosynthetic process | 9.62E-03 |
| 74 | GO:0008284: positive regulation of cell proliferation | 1.08E-02 |
| 75 | GO:0016117: carotenoid biosynthetic process | 1.08E-02 |
| 76 | GO:0071472: cellular response to salt stress | 1.20E-02 |
| 77 | GO:0009958: positive gravitropism | 1.20E-02 |
| 78 | GO:0006662: glycerol ether metabolic process | 1.20E-02 |
| 79 | GO:0010268: brassinosteroid homeostasis | 1.20E-02 |
| 80 | GO:0016132: brassinosteroid biosynthetic process | 1.39E-02 |
| 81 | GO:0032502: developmental process | 1.46E-02 |
| 82 | GO:0016125: sterol metabolic process | 1.60E-02 |
| 83 | GO:0046686: response to cadmium ion | 1.88E-02 |
| 84 | GO:0042254: ribosome biogenesis | 1.93E-02 |
| 85 | GO:0006974: cellular response to DNA damage stimulus | 1.96E-02 |
| 86 | GO:0009817: defense response to fungus, incompatible interaction | 2.19E-02 |
| 87 | GO:0048481: plant ovule development | 2.19E-02 |
| 88 | GO:0009813: flavonoid biosynthetic process | 2.26E-02 |
| 89 | GO:0080167: response to karrikin | 2.35E-02 |
| 90 | GO:0048527: lateral root development | 2.42E-02 |
| 91 | GO:0007568: aging | 2.42E-02 |
| 92 | GO:0009853: photorespiration | 2.59E-02 |
| 93 | GO:0034599: cellular response to oxidative stress | 2.67E-02 |
| 94 | GO:0010114: response to red light | 3.10E-02 |
| 95 | GO:0042538: hyperosmotic salinity response | 3.65E-02 |
| 96 | GO:0006486: protein glycosylation | 3.83E-02 |
| 97 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.93E-02 |
| 98 | GO:0006417: regulation of translation | 4.12E-02 |
| 99 | GO:0043086: negative regulation of catalytic activity | 4.32E-02 |
| 100 | GO:0006096: glycolytic process | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 3 | GO:0019843: rRNA binding | 1.27E-05 |
| 4 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.63E-05 |
| 5 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 3.99E-05 |
| 6 | GO:0051777: ent-kaurenoate oxidase activity | 1.42E-04 |
| 7 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.42E-04 |
| 8 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.25E-04 |
| 9 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.25E-04 |
| 10 | GO:0016630: protochlorophyllide reductase activity | 3.25E-04 |
| 11 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.25E-04 |
| 12 | GO:0004618: phosphoglycerate kinase activity | 3.25E-04 |
| 13 | GO:0003839: gamma-glutamylcyclotransferase activity | 3.25E-04 |
| 14 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.25E-04 |
| 15 | GO:0004047: aminomethyltransferase activity | 3.25E-04 |
| 16 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.25E-04 |
| 17 | GO:0031072: heat shock protein binding | 3.27E-04 |
| 18 | GO:0002161: aminoacyl-tRNA editing activity | 5.33E-04 |
| 19 | GO:0090729: toxin activity | 5.33E-04 |
| 20 | GO:0004075: biotin carboxylase activity | 5.33E-04 |
| 21 | GO:0004751: ribose-5-phosphate isomerase activity | 5.33E-04 |
| 22 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 5.33E-04 |
| 23 | GO:0071917: triose-phosphate transmembrane transporter activity | 5.33E-04 |
| 24 | GO:0003735: structural constituent of ribosome | 6.70E-04 |
| 25 | GO:0016851: magnesium chelatase activity | 7.63E-04 |
| 26 | GO:0016149: translation release factor activity, codon specific | 7.63E-04 |
| 27 | GO:0003883: CTP synthase activity | 7.63E-04 |
| 28 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 7.63E-04 |
| 29 | GO:0045430: chalcone isomerase activity | 1.01E-03 |
| 30 | GO:0015120: phosphoglycerate transmembrane transporter activity | 1.01E-03 |
| 31 | GO:0048038: quinone binding | 1.22E-03 |
| 32 | GO:0003959: NADPH dehydrogenase activity | 1.28E-03 |
| 33 | GO:0004356: glutamate-ammonia ligase activity | 1.28E-03 |
| 34 | GO:0003989: acetyl-CoA carboxylase activity | 1.28E-03 |
| 35 | GO:0004784: superoxide dismutase activity | 1.57E-03 |
| 36 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.57E-03 |
| 37 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.88E-03 |
| 38 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.88E-03 |
| 39 | GO:0008168: methyltransferase activity | 3.15E-03 |
| 40 | GO:0003747: translation release factor activity | 3.31E-03 |
| 41 | GO:0008047: enzyme activator activity | 4.12E-03 |
| 42 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.29E-03 |
| 43 | GO:0008559: xenobiotic-transporting ATPase activity | 4.55E-03 |
| 44 | GO:0047372: acylglycerol lipase activity | 4.55E-03 |
| 45 | GO:0000049: tRNA binding | 4.99E-03 |
| 46 | GO:0008378: galactosyltransferase activity | 4.99E-03 |
| 47 | GO:0003725: double-stranded RNA binding | 5.45E-03 |
| 48 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.45E-03 |
| 49 | GO:0008266: poly(U) RNA binding | 5.92E-03 |
| 50 | GO:0008083: growth factor activity | 5.92E-03 |
| 51 | GO:0031409: pigment binding | 6.91E-03 |
| 52 | GO:0051082: unfolded protein binding | 7.04E-03 |
| 53 | GO:0051536: iron-sulfur cluster binding | 7.42E-03 |
| 54 | GO:0004857: enzyme inhibitor activity | 7.42E-03 |
| 55 | GO:0005528: FK506 binding | 7.42E-03 |
| 56 | GO:0009055: electron carrier activity | 7.78E-03 |
| 57 | GO:0005509: calcium ion binding | 8.55E-03 |
| 58 | GO:0030570: pectate lyase activity | 9.62E-03 |
| 59 | GO:0003727: single-stranded RNA binding | 1.02E-02 |
| 60 | GO:0047134: protein-disulfide reductase activity | 1.08E-02 |
| 61 | GO:0004812: aminoacyl-tRNA ligase activity | 1.08E-02 |
| 62 | GO:0004791: thioredoxin-disulfide reductase activity | 1.26E-02 |
| 63 | GO:0003743: translation initiation factor activity | 1.43E-02 |
| 64 | GO:0016491: oxidoreductase activity | 1.46E-02 |
| 65 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.53E-02 |
| 66 | GO:0016791: phosphatase activity | 1.60E-02 |
| 67 | GO:0008483: transaminase activity | 1.67E-02 |
| 68 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.67E-02 |
| 69 | GO:0005200: structural constituent of cytoskeleton | 1.67E-02 |
| 70 | GO:0016597: amino acid binding | 1.74E-02 |
| 71 | GO:0016168: chlorophyll binding | 1.88E-02 |
| 72 | GO:0004721: phosphoprotein phosphatase activity | 2.03E-02 |
| 73 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.11E-02 |
| 74 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.42E-02 |
| 75 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.76E-02 |
| 76 | GO:0004364: glutathione transferase activity | 3.01E-02 |
| 77 | GO:0004185: serine-type carboxypeptidase activity | 3.10E-02 |
| 78 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.28E-02 |
| 79 | GO:0043621: protein self-association | 3.28E-02 |
| 80 | GO:0051287: NAD binding | 3.55E-02 |
| 81 | GO:0003690: double-stranded DNA binding | 3.93E-02 |
| 82 | GO:0030599: pectinesterase activity | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.77E-35 |
| 3 | GO:0009570: chloroplast stroma | 5.39E-25 |
| 4 | GO:0009579: thylakoid | 1.18E-20 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.74E-20 |
| 6 | GO:0009941: chloroplast envelope | 6.34E-16 |
| 7 | GO:0009534: chloroplast thylakoid | 7.44E-15 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 4.66E-13 |
| 9 | GO:0009654: photosystem II oxygen evolving complex | 5.76E-09 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.98E-08 |
| 11 | GO:0031977: thylakoid lumen | 1.07E-06 |
| 12 | GO:0019898: extrinsic component of membrane | 2.57E-06 |
| 13 | GO:0030095: chloroplast photosystem II | 1.21E-05 |
| 14 | GO:0048046: apoplast | 5.16E-05 |
| 15 | GO:0010319: stromule | 1.29E-04 |
| 16 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.42E-04 |
| 17 | GO:0009547: plastid ribosome | 1.42E-04 |
| 18 | GO:0010007: magnesium chelatase complex | 5.33E-04 |
| 19 | GO:0005840: ribosome | 6.73E-04 |
| 20 | GO:0005960: glycine cleavage complex | 7.63E-04 |
| 21 | GO:0031969: chloroplast membrane | 7.75E-04 |
| 22 | GO:0009539: photosystem II reaction center | 2.93E-03 |
| 23 | GO:0045298: tubulin complex | 3.31E-03 |
| 24 | GO:0005763: mitochondrial small ribosomal subunit | 3.31E-03 |
| 25 | GO:0000311: plastid large ribosomal subunit | 4.99E-03 |
| 26 | GO:0030076: light-harvesting complex | 6.41E-03 |
| 27 | GO:0009706: chloroplast inner membrane | 7.04E-03 |
| 28 | GO:0042651: thylakoid membrane | 7.95E-03 |
| 29 | GO:0015935: small ribosomal subunit | 8.49E-03 |
| 30 | GO:0016020: membrane | 1.26E-02 |
| 31 | GO:0005615: extracellular space | 1.36E-02 |
| 32 | GO:0022626: cytosolic ribosome | 1.39E-02 |
| 33 | GO:0046658: anchored component of plasma membrane | 1.62E-02 |
| 34 | GO:0000325: plant-type vacuole | 2.42E-02 |
| 35 | GO:0005618: cell wall | 2.67E-02 |
| 36 | GO:0009536: plastid | 4.58E-02 |