co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G68870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043392: negative regulation of DNA binding	0.00E+00
2	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
3	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
4	GO:0080127: fruit septum development	0.00E+00
5	GO:0031222: arabinan catabolic process	0.00E+00
6	GO:0006285: base-excision repair, AP site formation	2.77E-04
7	GO:0015904: tetracycline transport	2.77E-04
8	GO:0000373: Group II intron splicing	3.99E-04
9	GO:2000123: positive regulation of stomatal complex development	6.09E-04
10	GO:1900033: negative regulation of trichome patterning	6.09E-04
11	GO:0009786: regulation of asymmetric cell division	6.09E-04
12	GO:0031648: protein destabilization	6.09E-04
13	GO:0045910: negative regulation of DNA recombination	9.88E-04
14	GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion	9.88E-04
15	GO:0071398: cellular response to fatty acid	9.88E-04
16	GO:1990019: protein storage vacuole organization	1.41E-03
17	GO:0010371: regulation of gibberellin biosynthetic process	1.41E-03
18	GO:2000038: regulation of stomatal complex development	1.89E-03
19	GO:0009755: hormone-mediated signaling pathway	1.89E-03
20	GO:0048629: trichome patterning	1.89E-03
21	GO:0010438: cellular response to sulfur starvation	2.41E-03
22	GO:0010375: stomatal complex patterning	2.41E-03
23	GO:0009696: salicylic acid metabolic process	2.41E-03
24	GO:0045487: gibberellin catabolic process	2.41E-03
25	GO:0080110: sporopollenin biosynthetic process	2.41E-03
26	GO:0048497: maintenance of floral organ identity	2.41E-03
27	GO:0009741: response to brassinosteroid	2.51E-03
28	GO:0010358: leaf shaping	2.98E-03
29	GO:0016554: cytidine to uridine editing	2.98E-03
30	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.98E-03
31	GO:0009913: epidermal cell differentiation	2.98E-03
32	GO:1902456: regulation of stomatal opening	2.98E-03
33	GO:0003006: developmental process involved in reproduction	2.98E-03
34	GO:0010405: arabinogalactan protein metabolic process	2.98E-03
35	GO:0031930: mitochondria-nucleus signaling pathway	3.58E-03
36	GO:0009082: branched-chain amino acid biosynthetic process	3.58E-03
37	GO:0048509: regulation of meristem development	3.58E-03
38	GO:0009099: valine biosynthetic process	3.58E-03
39	GO:0030488: tRNA methylation	3.58E-03
40	GO:0006955: immune response	4.23E-03
41	GO:0045892: negative regulation of transcription, DNA-templated	4.44E-03
42	GO:0009819: drought recovery	4.90E-03
43	GO:0006402: mRNA catabolic process	4.90E-03
44	GO:0010439: regulation of glucosinolate biosynthetic process	4.90E-03
45	GO:0009704: de-etiolation	4.90E-03
46	GO:2000070: regulation of response to water deprivation	4.90E-03
47	GO:0000105: histidine biosynthetic process	4.90E-03
48	GO:0010497: plasmodesmata-mediated intercellular transport	5.62E-03
49	GO:0009097: isoleucine biosynthetic process	5.62E-03
50	GO:0040008: regulation of growth	6.02E-03
51	GO:0048507: meristem development	6.37E-03
52	GO:0051865: protein autoubiquitination	6.37E-03
53	GO:0009056: catabolic process	6.37E-03
54	GO:0009098: leucine biosynthetic process	7.15E-03
55	GO:1900865: chloroplast RNA modification	7.15E-03
56	GO:0031425: chloroplast RNA processing	7.15E-03
57	GO:0009867: jasmonic acid mediated signaling pathway	7.40E-03
58	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.97E-03
59	GO:0048829: root cap development	7.97E-03
60	GO:0009641: shade avoidance	7.97E-03
61	GO:0006298: mismatch repair	7.97E-03
62	GO:0016441: posttranscriptional gene silencing	7.97E-03
63	GO:0006631: fatty acid metabolic process	8.79E-03
64	GO:0009682: induced systemic resistance	8.82E-03
65	GO:0010582: floral meristem determinacy	9.70E-03
66	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.70E-03
67	GO:0010588: cotyledon vascular tissue pattern formation	1.06E-02
68	GO:0010102: lateral root morphogenesis	1.06E-02
69	GO:0030048: actin filament-based movement	1.06E-02
70	GO:2000028: regulation of photoperiodism, flowering	1.06E-02
71	GO:0009767: photosynthetic electron transport chain	1.06E-02
72	GO:0048467: gynoecium development	1.16E-02
73	GO:0010207: photosystem II assembly	1.16E-02
74	GO:0000162: tryptophan biosynthetic process	1.35E-02
75	GO:0016567: protein ubiquitination	1.37E-02
76	GO:0080147: root hair cell development	1.46E-02
77	GO:0005992: trehalose biosynthetic process	1.46E-02
78	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.53E-02
79	GO:0048278: vesicle docking	1.67E-02
80	GO:0016114: terpenoid biosynthetic process	1.67E-02
81	GO:0016998: cell wall macromolecule catabolic process	1.67E-02
82	GO:0010431: seed maturation	1.67E-02
83	GO:0006351: transcription, DNA-templated	1.68E-02
84	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.78E-02
85	GO:0009693: ethylene biosynthetic process	1.89E-02
86	GO:0071215: cellular response to abscisic acid stimulus	1.89E-02
87	GO:0009686: gibberellin biosynthetic process	1.89E-02
88	GO:0010082: regulation of root meristem growth	1.89E-02
89	GO:0009625: response to insect	1.89E-02
90	GO:0006468: protein phosphorylation	1.95E-02
91	GO:0010584: pollen exine formation	2.01E-02
92	GO:0006284: base-excision repair	2.01E-02
93	GO:0080022: primary root development	2.25E-02
94	GO:0010501: RNA secondary structure unwinding	2.25E-02
95	GO:0010087: phloem or xylem histogenesis	2.25E-02
96	GO:0010118: stomatal movement	2.25E-02
97	GO:0010268: brassinosteroid homeostasis	2.37E-02
98	GO:0010305: leaf vascular tissue pattern formation	2.37E-02
99	GO:0010182: sugar mediated signaling pathway	2.37E-02
100	GO:0048544: recognition of pollen	2.50E-02
101	GO:0007018: microtubule-based movement	2.50E-02
102	GO:0061025: membrane fusion	2.50E-02
103	GO:0048825: cotyledon development	2.63E-02
104	GO:0071554: cell wall organization or biogenesis	2.76E-02
105	GO:0016132: brassinosteroid biosynthetic process	2.76E-02
106	GO:0010583: response to cyclopentenone	2.89E-02
107	GO:0031047: gene silencing by RNA	2.89E-02
108	GO:0019761: glucosinolate biosynthetic process	2.89E-02
109	GO:0032502: developmental process	2.89E-02
110	GO:0016125: sterol metabolic process	3.16E-02
111	GO:0009451: RNA modification	3.26E-02
112	GO:0007267: cell-cell signaling	3.30E-02
113	GO:0051607: defense response to virus	3.44E-02
114	GO:0009739: response to gibberellin	3.56E-02
115	GO:0007166: cell surface receptor signaling pathway	3.64E-02
116	GO:0009734: auxin-activated signaling pathway	3.67E-02
117	GO:0006906: vesicle fusion	3.87E-02
118	GO:0009627: systemic acquired resistance	3.87E-02
119	GO:0048573: photoperiodism, flowering	4.02E-02
120	GO:0016311: dephosphorylation	4.17E-02
121	GO:0009817: defense response to fungus, incompatible interaction	4.33E-02
122	GO:0000160: phosphorelay signal transduction system	4.48E-02
123	GO:0010311: lateral root formation	4.48E-02
124	GO:0007165: signal transduction	4.53E-02
125	GO:0009733: response to auxin	4.75E-02
126	GO:0048527: lateral root development	4.79E-02
127	GO:0007568: aging	4.79E-02
128	GO:0009416: response to light stimulus	4.87E-02
129	GO:0006865: amino acid transport	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0071633: dihydroceramidase activity	0.00E+00
2	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
3	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
4	GO:0080030: methyl indole-3-acetate esterase activity	1.18E-04
5	GO:0050139: nicotinate-N-glucosyltransferase activity	2.77E-04
6	GO:0042834: peptidoglycan binding	2.77E-04
7	GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity	2.77E-04
8	GO:0010012: steroid 22-alpha hydroxylase activity	2.77E-04
9	GO:0008493: tetracycline transporter activity	6.09E-04
10	GO:0045543: gibberellin 2-beta-dioxygenase activity	6.09E-04
11	GO:0010296: prenylcysteine methylesterase activity	6.09E-04
12	GO:0003906: DNA-(apurinic or apyrimidinic site) lyase activity	9.88E-04
13	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.41E-03
14	GO:0052656: L-isoleucine transaminase activity	1.41E-03
15	GO:0052654: L-leucine transaminase activity	1.41E-03
16	GO:0080031: methyl salicylate esterase activity	1.41E-03
17	GO:0052655: L-valine transaminase activity	1.41E-03
18	GO:0019104: DNA N-glycosylase activity	1.89E-03
19	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	1.89E-03
20	GO:0004084: branched-chain-amino-acid transaminase activity	1.89E-03
21	GO:0019199: transmembrane receptor protein kinase activity	1.89E-03
22	GO:0046556: alpha-L-arabinofuranosidase activity	1.89E-03
23	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.41E-03
24	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.98E-03
25	GO:0004709: MAP kinase kinase kinase activity	2.98E-03
26	GO:0030983: mismatched DNA binding	2.98E-03
27	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.58E-03
28	GO:0016832: aldehyde-lyase activity	3.58E-03
29	GO:0004871: signal transducer activity	4.65E-03
30	GO:0042803: protein homodimerization activity	4.65E-03
31	GO:0003724: RNA helicase activity	5.62E-03
32	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	6.37E-03
33	GO:0004519: endonuclease activity	6.77E-03
34	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.40E-03
35	GO:0016301: kinase activity	7.52E-03
36	GO:0004805: trehalose-phosphatase activity	7.97E-03
37	GO:0043621: protein self-association	1.03E-02
38	GO:0016788: hydrolase activity, acting on ester bonds	1.14E-02
39	GO:0003774: motor activity	1.16E-02
40	GO:0003712: transcription cofactor activity	1.25E-02
41	GO:0003777: microtubule motor activity	1.43E-02
42	GO:0051536: iron-sulfur cluster binding	1.46E-02
43	GO:0031418: L-ascorbic acid binding	1.46E-02
44	GO:0004674: protein serine/threonine kinase activity	1.57E-02
45	GO:0010333: terpene synthase activity	1.67E-02
46	GO:0003964: RNA-directed DNA polymerase activity	1.67E-02
47	GO:0016874: ligase activity	1.73E-02
48	GO:0003779: actin binding	1.79E-02
49	GO:0030246: carbohydrate binding	2.21E-02
50	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.37E-02
51	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.37E-02
52	GO:0050662: coenzyme binding	2.50E-02
53	GO:0009055: electron carrier activity	2.62E-02
54	GO:0019901: protein kinase binding	2.63E-02
55	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.63E-02
56	GO:0004518: nuclease activity	2.89E-02
57	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.97E-02
58	GO:0000156: phosphorelay response regulator activity	3.02E-02
59	GO:0003684: damaged DNA binding	3.16E-02
60	GO:0005200: structural constituent of cytoskeleton	3.30E-02
61	GO:0008017: microtubule binding	3.33E-02
62	GO:0016413: O-acetyltransferase activity	3.44E-02
63	GO:0051213: dioxygenase activity	3.58E-02
64	GO:0004004: ATP-dependent RNA helicase activity	4.02E-02
65	GO:0008236: serine-type peptidase activity	4.17E-02
66	GO:0003723: RNA binding	4.33E-02
67	GO:0003677: DNA binding	4.54E-02
68	GO:0004222: metalloendopeptidase activity	4.64E-02
69	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.67E-02
70	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0030139: endocytic vesicle	9.88E-04
3	GO:0009654: photosystem II oxygen evolving complex	1.40E-03
4	GO:0032585: multivesicular body membrane	1.41E-03
5	GO:0009544: chloroplast ATP synthase complex	1.89E-03
6	GO:0019898: extrinsic component of membrane	2.89E-03
7	GO:0009986: cell surface	4.23E-03
8	GO:0042644: chloroplast nucleoid	6.37E-03
9	GO:0010494: cytoplasmic stress granule	6.37E-03
10	GO:0016459: myosin complex	7.97E-03
11	GO:0005578: proteinaceous extracellular matrix	1.06E-02
12	GO:0030095: chloroplast photosystem II	1.16E-02
13	GO:0012505: endomembrane system	1.79E-02
14	GO:0015629: actin cytoskeleton	1.89E-02
15	GO:0005871: kinesin complex	2.13E-02
16	GO:0009504: cell plate	2.63E-02
17	GO:0030529: intracellular ribonucleoprotein complex	3.58E-02
18	GO:0046658: anchored component of plasma membrane	4.20E-02