co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G68620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
2	GO:0048034: heme O biosynthetic process	0.00E+00
3	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
4	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
5	GO:0030149: sphingolipid catabolic process	0.00E+00
6	GO:0010398: xylogalacturonan metabolic process	0.00E+00
7	GO:0016102: diterpenoid biosynthetic process	0.00E+00
8	GO:0016139: glycoside catabolic process	0.00E+00
9	GO:0042744: hydrogen peroxide catabolic process	1.37E-06
10	GO:0055114: oxidation-reduction process	9.64E-06
11	GO:0010120: camalexin biosynthetic process	3.92E-05
12	GO:0042742: defense response to bacterium	6.33E-05
13	GO:0006979: response to oxidative stress	6.45E-05
14	GO:0033306: phytol metabolic process	6.74E-05
15	GO:1901430: positive regulation of syringal lignin biosynthetic process	6.74E-05
16	GO:0060862: negative regulation of floral organ abscission	6.74E-05
17	GO:0006807: nitrogen compound metabolic process	1.15E-04
18	GO:0046939: nucleotide phosphorylation	1.62E-04
19	GO:0031349: positive regulation of defense response	1.62E-04
20	GO:0015865: purine nucleotide transport	1.62E-04
21	GO:0019752: carboxylic acid metabolic process	1.62E-04
22	GO:1902000: homogentisate catabolic process	1.62E-04
23	GO:0043132: NAD transport	1.62E-04
24	GO:0031204: posttranslational protein targeting to membrane, translocation	1.62E-04
25	GO:0045454: cell redox homeostasis	2.12E-04
26	GO:0009072: aromatic amino acid family metabolic process	2.75E-04
27	GO:0055074: calcium ion homeostasis	2.75E-04
28	GO:0044375: regulation of peroxisome size	2.75E-04
29	GO:0006662: glycerol ether metabolic process	3.82E-04
30	GO:0009058: biosynthetic process	3.89E-04
31	GO:0046902: regulation of mitochondrial membrane permeability	3.98E-04
32	GO:0015858: nucleoside transport	3.98E-04
33	GO:0080028: nitrile biosynthetic process	3.98E-04
34	GO:0010188: response to microbial phytotoxin	5.32E-04
35	GO:0006878: cellular copper ion homeostasis	5.32E-04
36	GO:0010150: leaf senescence	5.47E-04
37	GO:0000304: response to singlet oxygen	6.73E-04
38	GO:0046283: anthocyanin-containing compound metabolic process	6.73E-04
39	GO:0006564: L-serine biosynthetic process	6.73E-04
40	GO:0050832: defense response to fungus	7.02E-04
41	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	8.23E-04
42	GO:0009228: thiamine biosynthetic process	8.23E-04
43	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	8.23E-04
44	GO:0006561: proline biosynthetic process	8.23E-04
45	GO:0010942: positive regulation of cell death	8.23E-04
46	GO:0046686: response to cadmium ion	9.11E-04
47	GO:0009407: toxin catabolic process	9.50E-04
48	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	9.79E-04
49	GO:0045926: negative regulation of growth	9.79E-04
50	GO:0034599: cellular response to oxidative stress	1.13E-03
51	GO:0080027: response to herbivore	1.14E-03
52	GO:1900056: negative regulation of leaf senescence	1.14E-03
53	GO:0006839: mitochondrial transport	1.23E-03
54	GO:0007186: G-protein coupled receptor signaling pathway	1.50E-03
55	GO:0010497: plasmodesmata-mediated intercellular transport	1.50E-03
56	GO:0010204: defense response signaling pathway, resistance gene-independent	1.50E-03
57	GO:0019432: triglyceride biosynthetic process	1.69E-03
58	GO:0009821: alkaloid biosynthetic process	1.69E-03
59	GO:0006783: heme biosynthetic process	1.69E-03
60	GO:2000280: regulation of root development	1.89E-03
61	GO:0043069: negative regulation of programmed cell death	2.10E-03
62	GO:0009682: induced systemic resistance	2.31E-03
63	GO:0052544: defense response by callose deposition in cell wall	2.31E-03
64	GO:0072593: reactive oxygen species metabolic process	2.31E-03
65	GO:0002213: defense response to insect	2.53E-03
66	GO:0009718: anthocyanin-containing compound biosynthetic process	2.76E-03
67	GO:0019762: glucosinolate catabolic process	3.48E-03
68	GO:0000162: tryptophan biosynthetic process	3.48E-03
69	GO:0009735: response to cytokinin	3.67E-03
70	GO:0045333: cellular respiration	3.73E-03
71	GO:0005992: trehalose biosynthetic process	3.73E-03
72	GO:0006874: cellular calcium ion homeostasis	3.99E-03
73	GO:0009611: response to wounding	4.23E-03
74	GO:0048511: rhythmic process	4.26E-03
75	GO:0010089: xylem development	5.09E-03
76	GO:0009617: response to bacterium	5.34E-03
77	GO:0010118: stomatal movement	5.68E-03
78	GO:0045489: pectin biosynthetic process	5.98E-03
79	GO:0006520: cellular amino acid metabolic process	5.98E-03
80	GO:0010183: pollen tube guidance	6.60E-03
81	GO:0009851: auxin biosynthetic process	6.60E-03
82	GO:0071554: cell wall organization or biogenesis	6.91E-03
83	GO:0009630: gravitropism	7.24E-03
84	GO:1901657: glycosyl compound metabolic process	7.57E-03
85	GO:0006952: defense response	8.36E-03
86	GO:0009615: response to virus	8.93E-03
87	GO:0007568: aging	1.19E-02
88	GO:0010043: response to zinc ion	1.19E-02
89	GO:0006099: tricarboxylic acid cycle	1.31E-02
90	GO:0009753: response to jasmonic acid	1.36E-02
91	GO:0006855: drug transmembrane transport	1.70E-02
92	GO:0031347: regulation of defense response	1.74E-02
93	GO:0042538: hyperosmotic salinity response	1.79E-02
94	GO:0009664: plant-type cell wall organization	1.79E-02
95	GO:0009809: lignin biosynthetic process	1.88E-02
96	GO:0006096: glycolytic process	2.12E-02
97	GO:0009626: plant-type hypersensitive response	2.22E-02
98	GO:0009416: response to light stimulus	2.26E-02
99	GO:0009620: response to fungus	2.26E-02
100	GO:0009624: response to nematode	2.42E-02
101	GO:0007165: signal transduction	2.55E-02
102	GO:0055085: transmembrane transport	2.86E-02
103	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.86E-02
104	GO:0009739: response to gibberellin	3.86E-02
105	GO:0009826: unidimensional cell growth	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
2	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
3	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
4	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
5	GO:0080013: (E,E)-geranyllinalool synthase activity	0.00E+00
6	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
7	GO:0044610: FMN transmembrane transporter activity	0.00E+00
8	GO:0008495: protoheme IX farnesyltransferase activity	0.00E+00
9	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
10	GO:0004601: peroxidase activity	2.56E-10
11	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.18E-05
12	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.18E-05
13	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	6.74E-05
14	GO:2001227: quercitrin binding	6.74E-05
15	GO:0000824: inositol tetrakisphosphate 3-kinase activity	6.74E-05
16	GO:0033984: indole-3-glycerol-phosphate lyase activity	6.74E-05
17	GO:0047326: inositol tetrakisphosphate 5-kinase activity	6.74E-05
18	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	6.74E-05
19	GO:0048037: cofactor binding	6.74E-05
20	GO:0015230: FAD transmembrane transporter activity	6.74E-05
21	GO:2001147: camalexin binding	6.74E-05
22	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	6.74E-05
23	GO:0004364: glutathione transferase activity	1.02E-04
24	GO:0051724: NAD transporter activity	1.62E-04
25	GO:0046593: mandelonitrile lyase activity	1.62E-04
26	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.62E-04
27	GO:0019172: glyoxalase III activity	1.62E-04
28	GO:0008517: folic acid transporter activity	1.62E-04
29	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.62E-04
30	GO:0004566: beta-glucuronidase activity	1.62E-04
31	GO:0015228: coenzyme A transmembrane transporter activity	1.62E-04
32	GO:0020037: heme binding	1.87E-04
33	GO:0015035: protein disulfide oxidoreductase activity	2.81E-04
34	GO:0047134: protein-disulfide reductase activity	3.27E-04
35	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	3.98E-04
36	GO:0019201: nucleotide kinase activity	3.98E-04
37	GO:0004416: hydroxyacylglutathione hydrolase activity	3.98E-04
38	GO:0004791: thioredoxin-disulfide reductase activity	4.10E-04
39	GO:0030170: pyridoxal phosphate binding	4.15E-04
40	GO:0004834: tryptophan synthase activity	5.32E-04
41	GO:0005086: ARF guanyl-nucleotide exchange factor activity	5.32E-04
42	GO:0004930: G-protein coupled receptor activity	5.32E-04
43	GO:0004659: prenyltransferase activity	5.32E-04
44	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	5.33E-04
45	GO:0080122: AMP transmembrane transporter activity	6.73E-04
46	GO:0005471: ATP:ADP antiporter activity	6.73E-04
47	GO:0035252: UDP-xylosyltransferase activity	8.23E-04
48	GO:0015217: ADP transmembrane transporter activity	9.79E-04
49	GO:0051920: peroxiredoxin activity	9.79E-04
50	GO:0004017: adenylate kinase activity	9.79E-04
51	GO:0004144: diacylglycerol O-acyltransferase activity	9.79E-04
52	GO:0005347: ATP transmembrane transporter activity	9.79E-04
53	GO:0016831: carboxy-lyase activity	1.14E-03
54	GO:0043295: glutathione binding	1.14E-03
55	GO:0016209: antioxidant activity	1.32E-03
56	GO:0004311: farnesyltranstransferase activity	1.32E-03
57	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.32E-03
58	GO:0004743: pyruvate kinase activity	1.89E-03
59	GO:0030955: potassium ion binding	1.89E-03
60	GO:0016844: strictosidine synthase activity	1.89E-03
61	GO:0004713: protein tyrosine kinase activity	2.10E-03
62	GO:0008794: arsenate reductase (glutaredoxin) activity	2.31E-03
63	GO:0008559: xenobiotic-transporting ATPase activity	2.31E-03
64	GO:0004022: alcohol dehydrogenase (NAD) activity	2.76E-03
65	GO:0015095: magnesium ion transmembrane transporter activity	2.76E-03
66	GO:0005217: intracellular ligand-gated ion channel activity	3.23E-03
67	GO:0004970: ionotropic glutamate receptor activity	3.23E-03
68	GO:0008565: protein transporter activity	3.89E-03
69	GO:0010333: terpene synthase activity	4.26E-03
70	GO:0001085: RNA polymerase II transcription factor binding	5.98E-03
71	GO:0005199: structural constituent of cell wall	5.98E-03
72	GO:0005507: copper ion binding	6.44E-03
73	GO:0000287: magnesium ion binding	6.78E-03
74	GO:0016788: hydrolase activity, acting on ester bonds	7.04E-03
75	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	8.24E-03
76	GO:0016413: O-acetyltransferase activity	8.59E-03
77	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.08E-02
78	GO:0003824: catalytic activity	1.13E-02
79	GO:0030145: manganese ion binding	1.19E-02
80	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.19E-02
81	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.27E-02
82	GO:0008422: beta-glucosidase activity	1.35E-02
83	GO:0046872: metal ion binding	1.57E-02
84	GO:0005198: structural molecule activity	1.65E-02
85	GO:0045735: nutrient reservoir activity	2.12E-02
86	GO:0051082: unfolded protein binding	2.42E-02
87	GO:0016740: transferase activity	2.75E-02
88	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.11E-02
89	GO:0015297: antiporter activity	3.45E-02
90	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.23E-02
91	GO:0005506: iron ion binding	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
2	GO:0005784: Sec61 translocon complex	0.00E+00
3	GO:0005773: vacuole	2.62E-05
4	GO:0046861: glyoxysomal membrane	2.75E-04
5	GO:0009530: primary cell wall	2.75E-04
6	GO:0005794: Golgi apparatus	1.01E-03
7	GO:0009514: glyoxysome	1.50E-03
8	GO:0005779: integral component of peroxisomal membrane	1.50E-03
9	GO:0005743: mitochondrial inner membrane	1.82E-03
10	GO:0005765: lysosomal membrane	2.31E-03
11	GO:0010287: plastoglobule	3.09E-03
12	GO:0005774: vacuolar membrane	3.68E-03
13	GO:0005783: endoplasmic reticulum	3.78E-03
14	GO:0048046: apoplast	4.00E-03
15	GO:0005618: cell wall	4.65E-03
16	GO:0005778: peroxisomal membrane	8.24E-03
17	GO:0005788: endoplasmic reticulum lumen	9.29E-03
18	GO:0005667: transcription factor complex	9.65E-03
19	GO:0005886: plasma membrane	1.09E-02
20	GO:0000325: plant-type vacuole	1.19E-02
21	GO:0009506: plasmodesma	1.31E-02
22	GO:0031977: thylakoid lumen	1.44E-02
23	GO:0090406: pollen tube	1.52E-02
24	GO:0000502: proteasome complex	1.88E-02
25	GO:0005829: cytosol	2.02E-02
26	GO:0005576: extracellular region	2.31E-02
27	GO:0005777: peroxisome	2.59E-02
28	GO:0016020: membrane	3.63E-02
29	GO:0009507: chloroplast	4.02E-02