GO Enrichment Analysis of Co-expressed Genes with
AT1G68560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 2 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 3 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 4 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 5 | GO:0019685: photosynthesis, dark reaction | 0.00E+00 |
| 6 | GO:0043457: regulation of cellular respiration | 0.00E+00 |
| 7 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 8 | GO:2000023: regulation of lateral root development | 0.00E+00 |
| 9 | GO:0006002: fructose 6-phosphate metabolic process | 7.69E-05 |
| 10 | GO:0010266: response to vitamin B1 | 1.04E-04 |
| 11 | GO:0043609: regulation of carbon utilization | 1.04E-04 |
| 12 | GO:0051171: regulation of nitrogen compound metabolic process | 1.04E-04 |
| 13 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 1.04E-04 |
| 14 | GO:0043971: histone H3-K18 acetylation | 1.04E-04 |
| 15 | GO:0009451: RNA modification | 1.44E-04 |
| 16 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 2.44E-04 |
| 17 | GO:0006435: threonyl-tRNA aminoacylation | 2.44E-04 |
| 18 | GO:0016045: detection of bacterium | 4.05E-04 |
| 19 | GO:0042780: tRNA 3'-end processing | 4.05E-04 |
| 20 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 4.05E-04 |
| 21 | GO:0006000: fructose metabolic process | 4.05E-04 |
| 22 | GO:0006013: mannose metabolic process | 4.05E-04 |
| 23 | GO:0009800: cinnamic acid biosynthetic process | 5.82E-04 |
| 24 | GO:0010255: glucose mediated signaling pathway | 5.82E-04 |
| 25 | GO:2001141: regulation of RNA biosynthetic process | 5.82E-04 |
| 26 | GO:0006021: inositol biosynthetic process | 7.73E-04 |
| 27 | GO:0009229: thiamine diphosphate biosynthetic process | 9.77E-04 |
| 28 | GO:0006465: signal peptide processing | 9.77E-04 |
| 29 | GO:0009228: thiamine biosynthetic process | 1.19E-03 |
| 30 | GO:0042793: transcription from plastid promoter | 1.19E-03 |
| 31 | GO:0006559: L-phenylalanine catabolic process | 1.19E-03 |
| 32 | GO:0009793: embryo development ending in seed dormancy | 1.38E-03 |
| 33 | GO:0034389: lipid particle organization | 1.43E-03 |
| 34 | GO:0009610: response to symbiotic fungus | 1.67E-03 |
| 35 | GO:0032508: DNA duplex unwinding | 1.93E-03 |
| 36 | GO:0000105: histidine biosynthetic process | 1.93E-03 |
| 37 | GO:0006353: DNA-templated transcription, termination | 1.93E-03 |
| 38 | GO:0032544: plastid translation | 2.21E-03 |
| 39 | GO:0044030: regulation of DNA methylation | 2.21E-03 |
| 40 | GO:0071482: cellular response to light stimulus | 2.21E-03 |
| 41 | GO:0009827: plant-type cell wall modification | 2.21E-03 |
| 42 | GO:0000373: Group II intron splicing | 2.49E-03 |
| 43 | GO:0019432: triglyceride biosynthetic process | 2.49E-03 |
| 44 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.79E-03 |
| 45 | GO:0006415: translational termination | 3.42E-03 |
| 46 | GO:0006352: DNA-templated transcription, initiation | 3.42E-03 |
| 47 | GO:0006790: sulfur compound metabolic process | 3.75E-03 |
| 48 | GO:0046854: phosphatidylinositol phosphorylation | 4.80E-03 |
| 49 | GO:0080188: RNA-directed DNA methylation | 4.80E-03 |
| 50 | GO:0006071: glycerol metabolic process | 5.18E-03 |
| 51 | GO:0010187: negative regulation of seed germination | 5.56E-03 |
| 52 | GO:0006289: nucleotide-excision repair | 5.56E-03 |
| 53 | GO:0006338: chromatin remodeling | 5.56E-03 |
| 54 | GO:0010073: meristem maintenance | 5.95E-03 |
| 55 | GO:0009269: response to desiccation | 6.35E-03 |
| 56 | GO:0016226: iron-sulfur cluster assembly | 6.76E-03 |
| 57 | GO:0019748: secondary metabolic process | 6.76E-03 |
| 58 | GO:0006633: fatty acid biosynthetic process | 7.28E-03 |
| 59 | GO:0048443: stamen development | 7.61E-03 |
| 60 | GO:0006508: proteolysis | 8.37E-03 |
| 61 | GO:0009416: response to light stimulus | 8.64E-03 |
| 62 | GO:0048868: pollen tube development | 8.95E-03 |
| 63 | GO:0045489: pectin biosynthetic process | 8.95E-03 |
| 64 | GO:0016126: sterol biosynthetic process | 1.35E-02 |
| 65 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.40E-02 |
| 66 | GO:0030244: cellulose biosynthetic process | 1.62E-02 |
| 67 | GO:0010311: lateral root formation | 1.68E-02 |
| 68 | GO:0006499: N-terminal protein myristoylation | 1.74E-02 |
| 69 | GO:0009834: plant-type secondary cell wall biogenesis | 1.74E-02 |
| 70 | GO:0048527: lateral root development | 1.80E-02 |
| 71 | GO:0009910: negative regulation of flower development | 1.80E-02 |
| 72 | GO:0009631: cold acclimation | 1.80E-02 |
| 73 | GO:0008283: cell proliferation | 2.30E-02 |
| 74 | GO:0009736: cytokinin-activated signaling pathway | 2.84E-02 |
| 75 | GO:0006364: rRNA processing | 2.84E-02 |
| 76 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.91E-02 |
| 77 | GO:0009409: response to cold | 3.09E-02 |
| 78 | GO:0006096: glycolytic process | 3.20E-02 |
| 79 | GO:0048316: seed development | 3.28E-02 |
| 80 | GO:0009740: gibberellic acid mediated signaling pathway | 3.50E-02 |
| 81 | GO:0016569: covalent chromatin modification | 3.50E-02 |
| 82 | GO:0009553: embryo sac development | 3.58E-02 |
| 83 | GO:0042744: hydrogen peroxide catabolic process | 4.70E-02 |
| 84 | GO:0009790: embryo development | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 2 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 3 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
| 4 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
| 5 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 6 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.04E-04 |
| 7 | GO:0004829: threonine-tRNA ligase activity | 2.44E-04 |
| 8 | GO:0080041: ADP-ribose pyrophosphohydrolase activity | 2.44E-04 |
| 9 | GO:0004047: aminomethyltransferase activity | 2.44E-04 |
| 10 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.44E-04 |
| 11 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.44E-04 |
| 12 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.44E-04 |
| 13 | GO:0032549: ribonucleoside binding | 4.05E-04 |
| 14 | GO:0016805: dipeptidase activity | 4.05E-04 |
| 15 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 4.05E-04 |
| 16 | GO:0045548: phenylalanine ammonia-lyase activity | 4.05E-04 |
| 17 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 4.05E-04 |
| 18 | GO:0000254: C-4 methylsterol oxidase activity | 5.82E-04 |
| 19 | GO:0070628: proteasome binding | 7.73E-04 |
| 20 | GO:0001053: plastid sigma factor activity | 7.73E-04 |
| 21 | GO:0016987: sigma factor activity | 7.73E-04 |
| 22 | GO:0010385: double-stranded methylated DNA binding | 7.73E-04 |
| 23 | GO:0004519: endonuclease activity | 8.39E-04 |
| 24 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 9.77E-04 |
| 25 | GO:0008237: metallopeptidase activity | 1.04E-03 |
| 26 | GO:0031593: polyubiquitin binding | 1.19E-03 |
| 27 | GO:2001070: starch binding | 1.19E-03 |
| 28 | GO:0004144: diacylglycerol O-acyltransferase activity | 1.43E-03 |
| 29 | GO:0004559: alpha-mannosidase activity | 1.43E-03 |
| 30 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.43E-03 |
| 31 | GO:0004222: metalloendopeptidase activity | 1.66E-03 |
| 32 | GO:0003872: 6-phosphofructokinase activity | 1.67E-03 |
| 33 | GO:0004185: serine-type carboxypeptidase activity | 2.44E-03 |
| 34 | GO:0003747: translation release factor activity | 2.49E-03 |
| 35 | GO:0003678: DNA helicase activity | 2.49E-03 |
| 36 | GO:0015020: glucuronosyltransferase activity | 3.10E-03 |
| 37 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.27E-03 |
| 38 | GO:0001054: RNA polymerase I activity | 3.42E-03 |
| 39 | GO:0003676: nucleic acid binding | 4.31E-03 |
| 40 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.18E-03 |
| 41 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.18E-03 |
| 42 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.18E-03 |
| 43 | GO:0003723: RNA binding | 5.19E-03 |
| 44 | GO:0051536: iron-sulfur cluster binding | 5.56E-03 |
| 45 | GO:0043130: ubiquitin binding | 5.56E-03 |
| 46 | GO:0019843: rRNA binding | 5.80E-03 |
| 47 | GO:0004176: ATP-dependent peptidase activity | 6.35E-03 |
| 48 | GO:0004402: histone acetyltransferase activity | 8.49E-03 |
| 49 | GO:0008536: Ran GTPase binding | 8.95E-03 |
| 50 | GO:0001085: RNA polymerase II transcription factor binding | 8.95E-03 |
| 51 | GO:0003684: damaged DNA binding | 1.19E-02 |
| 52 | GO:0016413: O-acetyltransferase activity | 1.29E-02 |
| 53 | GO:0003682: chromatin binding | 1.31E-02 |
| 54 | GO:0004721: phosphoprotein phosphatase activity | 1.51E-02 |
| 55 | GO:0004806: triglyceride lipase activity | 1.51E-02 |
| 56 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.80E-02 |
| 57 | GO:0003697: single-stranded DNA binding | 1.92E-02 |
| 58 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.11E-02 |
| 59 | GO:0042393: histone binding | 2.11E-02 |
| 60 | GO:0003824: catalytic activity | 2.38E-02 |
| 61 | GO:0046872: metal ion binding | 2.76E-02 |
| 62 | GO:0003690: double-stranded DNA binding | 2.91E-02 |
| 63 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.28E-02 |
| 64 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.43E-02 |
| 65 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.43E-02 |
| 66 | GO:0016887: ATPase activity | 3.53E-02 |
| 67 | GO:0004386: helicase activity | 3.89E-02 |
| 68 | GO:0016758: transferase activity, transferring hexosyl groups | 4.21E-02 |
| 69 | GO:0016829: lyase activity | 4.54E-02 |
| 70 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.80E-05 |
| 2 | GO:0005945: 6-phosphofructokinase complex | 9.77E-04 |
| 3 | GO:0005811: lipid particle | 2.21E-03 |
| 4 | GO:0005736: DNA-directed RNA polymerase I complex | 2.49E-03 |
| 5 | GO:0016602: CCAAT-binding factor complex | 4.09E-03 |
| 6 | GO:0009508: plastid chromosome | 4.09E-03 |
| 7 | GO:0043231: intracellular membrane-bounded organelle | 4.72E-03 |
| 8 | GO:0009532: plastid stroma | 6.35E-03 |
| 9 | GO:0009505: plant-type cell wall | 7.18E-03 |
| 10 | GO:0009295: nucleoid | 1.24E-02 |
| 11 | GO:0030529: intracellular ribonucleoprotein complex | 1.35E-02 |
| 12 | GO:0005667: transcription factor complex | 1.45E-02 |
| 13 | GO:0005802: trans-Golgi network | 1.57E-02 |
| 14 | GO:0005768: endosome | 1.85E-02 |
| 15 | GO:0005856: cytoskeleton | 2.50E-02 |
| 16 | GO:0009570: chloroplast stroma | 3.05E-02 |
| 17 | GO:0005789: endoplasmic reticulum membrane | 3.58E-02 |