co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G68300

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0036258: multivesicular body assembly	0.00E+00
2	GO:0006511: ubiquitin-dependent protein catabolic process	3.38E-10
3	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	5.63E-06
4	GO:0006144: purine nucleobase metabolic process	4.31E-05
5	GO:0019628: urate catabolic process	4.31E-05
6	GO:1901430: positive regulation of syringal lignin biosynthetic process	4.31E-05
7	GO:0051603: proteolysis involved in cellular protein catabolic process	7.53E-05
8	GO:0007031: peroxisome organization	7.88E-05
9	GO:0010372: positive regulation of gibberellin biosynthetic process	1.07E-04
10	GO:0030433: ubiquitin-dependent ERAD pathway	1.37E-04
11	GO:0010359: regulation of anion channel activity	1.84E-04
12	GO:0070676: intralumenal vesicle formation	2.70E-04
13	GO:0010363: regulation of plant-type hypersensitive response	3.64E-04
14	GO:0006564: L-serine biosynthetic process	4.63E-04
15	GO:0006461: protein complex assembly	4.63E-04
16	GO:0048280: vesicle fusion with Golgi apparatus	6.76E-04
17	GO:0000338: protein deneddylation	7.90E-04
18	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	9.08E-04
19	GO:0006402: mRNA catabolic process	9.08E-04
20	GO:0006972: hyperosmotic response	1.03E-03
21	GO:0046685: response to arsenic-containing substance	1.16E-03
22	GO:0009651: response to salt stress	1.23E-03
23	GO:0006096: glycolytic process	1.24E-03
24	GO:0090332: stomatal closure	1.29E-03
25	GO:0006896: Golgi to vacuole transport	1.43E-03
26	GO:0046686: response to cadmium ion	1.67E-03
27	GO:0006790: sulfur compound metabolic process	1.72E-03
28	GO:0006820: anion transport	1.72E-03
29	GO:0006829: zinc II ion transport	1.87E-03
30	GO:0034605: cellular response to heat	2.03E-03
31	GO:0046854: phosphatidylinositol phosphorylation	2.19E-03
32	GO:0009306: protein secretion	3.43E-03
33	GO:0010089: xylem development	3.43E-03
34	GO:0009561: megagametogenesis	3.43E-03
35	GO:0042147: retrograde transport, endosome to Golgi	3.63E-03
36	GO:0009646: response to absence of light	4.23E-03
37	GO:0055072: iron ion homeostasis	4.43E-03
38	GO:0006623: protein targeting to vacuole	4.43E-03
39	GO:0006891: intra-Golgi vesicle-mediated transport	4.64E-03
40	GO:0009630: gravitropism	4.86E-03
41	GO:0031047: gene silencing by RNA	4.86E-03
42	GO:0030163: protein catabolic process	5.07E-03
43	GO:0006914: autophagy	5.30E-03
44	GO:0016579: protein deubiquitination	5.75E-03
45	GO:0015031: protein transport	6.50E-03
46	GO:0006888: ER to Golgi vesicle-mediated transport	6.69E-03
47	GO:0010311: lateral root formation	7.43E-03
48	GO:0006811: ion transport	7.69E-03
49	GO:0006499: N-terminal protein myristoylation	7.69E-03
50	GO:0010043: response to zinc ion	7.95E-03
51	GO:0010119: regulation of stomatal movement	7.95E-03
52	GO:0030001: metal ion transport	9.28E-03
53	GO:0009640: photomorphogenesis	1.01E-02
54	GO:0009809: lignin biosynthetic process	1.25E-02
55	GO:0009585: red, far-red light phototransduction	1.25E-02
56	GO:0035556: intracellular signal transduction	1.33E-02
57	GO:0055085: transmembrane transport	1.60E-02
58	GO:0018105: peptidyl-serine phosphorylation	1.64E-02
59	GO:0042744: hydrogen peroxide catabolic process	2.06E-02
60	GO:0055114: oxidation-reduction process	2.08E-02
61	GO:0040008: regulation of growth	2.29E-02
62	GO:0006979: response to oxidative stress	2.58E-02
63	GO:0009617: response to bacterium	2.68E-02
64	GO:0046777: protein autophosphorylation	3.94E-02
65	GO:0045454: cell redox homeostasis	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0008418: protein-N-terminal asparagine amidohydrolase activity	0.00E+00
2	GO:0004846: urate oxidase activity	0.00E+00
3	GO:0004298: threonine-type endopeptidase activity	9.30E-11
4	GO:0008233: peptidase activity	2.57E-06
5	GO:0036402: proteasome-activating ATPase activity	5.63E-06
6	GO:0030955: potassium ion binding	3.03E-05
7	GO:0004743: pyruvate kinase activity	3.03E-05
8	GO:0019786: Atg8-specific protease activity	4.31E-05
9	GO:0017025: TBP-class protein binding	7.88E-05
10	GO:0004617: phosphoglycerate dehydrogenase activity	1.07E-04
11	GO:0019779: Atg8 activating enzyme activity	1.07E-04
12	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.84E-04
13	GO:0004518: nuclease activity	2.83E-04
14	GO:0019776: Atg8 ligase activity	3.64E-04
15	GO:0004656: procollagen-proline 4-dioxygenase activity	6.76E-04
16	GO:0051920: peroxiredoxin activity	6.76E-04
17	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	6.76E-04
18	GO:0004602: glutathione peroxidase activity	6.76E-04
19	GO:0015288: porin activity	9.08E-04
20	GO:0016209: antioxidant activity	9.08E-04
21	GO:0008308: voltage-gated anion channel activity	1.03E-03
22	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.43E-03
23	GO:0031418: L-ascorbic acid binding	2.52E-03
24	GO:0043130: ubiquitin binding	2.52E-03
25	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.88E-03
26	GO:0000287: magnesium ion binding	3.81E-03
27	GO:0004601: peroxidase activity	3.88E-03
28	GO:0046873: metal ion transmembrane transporter activity	4.02E-03
29	GO:0004872: receptor activity	4.43E-03
30	GO:0004843: thiol-dependent ubiquitin-specific protease activity	4.64E-03
31	GO:0016597: amino acid binding	5.75E-03
32	GO:0009931: calcium-dependent protein serine/threonine kinase activity	6.45E-03
33	GO:0004683: calmodulin-dependent protein kinase activity	6.69E-03
34	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	8.47E-03
35	GO:0000149: SNARE binding	9.01E-03
36	GO:0005484: SNAP receptor activity	1.01E-02
37	GO:0035091: phosphatidylinositol binding	1.07E-02
38	GO:0016887: ATPase activity	1.10E-02
39	GO:0051287: NAD binding	1.16E-02
40	GO:0000166: nucleotide binding	1.26E-02
41	GO:0008026: ATP-dependent helicase activity	1.67E-02
42	GO:0005516: calmodulin binding	1.90E-02
43	GO:0005515: protein binding	2.17E-02
44	GO:0005509: calcium ion binding	2.36E-02
45	GO:0042802: identical protein binding	2.80E-02
46	GO:0003729: mRNA binding	3.80E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	7.42E-14
2	GO:0005839: proteasome core complex	9.30E-11
3	GO:0005829: cytosol	3.87E-08
4	GO:0031597: cytosolic proteasome complex	8.18E-06
5	GO:0031595: nuclear proteasome complex	1.13E-05
6	GO:0019773: proteasome core complex, alpha-subunit complex	1.95E-05
7	GO:0008540: proteasome regulatory particle, base subcomplex	3.03E-05
8	GO:0016442: RISC complex	4.31E-05
9	GO:0005838: proteasome regulatory particle	1.84E-04
10	GO:0005775: vacuolar lumen	2.70E-04
11	GO:0005776: autophagosome	3.64E-04
12	GO:0000813: ESCRT I complex	4.63E-04
13	GO:0030140: trans-Golgi network transport vesicle	5.67E-04
14	GO:0031902: late endosome membrane	7.37E-04
15	GO:0012507: ER to Golgi transport vesicle membrane	9.08E-04
16	GO:0000421: autophagosome membrane	9.08E-04
17	GO:0046930: pore complex	1.03E-03
18	GO:0010494: cytoplasmic stress granule	1.16E-03
19	GO:0008180: COP9 signalosome	1.16E-03
20	GO:0048471: perinuclear region of cytoplasm	1.57E-03
21	GO:0005886: plasma membrane	2.30E-03
22	GO:0005741: mitochondrial outer membrane	2.88E-03
23	GO:0031410: cytoplasmic vesicle	3.06E-03
24	GO:0005770: late endosome	4.02E-03
25	GO:0005778: peroxisomal membrane	5.52E-03
26	GO:0005774: vacuolar membrane	5.62E-03
27	GO:0000932: P-body	5.98E-03
28	GO:0005618: cell wall	6.90E-03
29	GO:0000325: plant-type vacuole	7.95E-03
30	GO:0031201: SNARE complex	9.56E-03
31	GO:0005773: vacuole	1.07E-02
32	GO:0022626: cytosolic ribosome	1.20E-02
33	GO:0005635: nuclear envelope	1.31E-02
34	GO:0005777: peroxisome	1.45E-02
35	GO:0016020: membrane	2.38E-02
36	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.44E-02
37	GO:0005874: microtubule	3.67E-02
38	GO:0005789: endoplasmic reticulum membrane	3.90E-02
39	GO:0005737: cytoplasm	4.92E-02