Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G67400

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045014: negative regulation of transcription by glucose0.00E+00
2GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA0.00E+00
3GO:0080127: fruit septum development0.00E+00
4GO:0034757: negative regulation of iron ion transport2.16E-04
5GO:0010726: positive regulation of hydrogen peroxide metabolic process2.16E-04
6GO:0006438: valyl-tRNA aminoacylation2.16E-04
7GO:0032958: inositol phosphate biosynthetic process2.16E-04
8GO:0051013: microtubule severing2.16E-04
9GO:0010583: response to cyclopentenone2.25E-04
10GO:0009734: auxin-activated signaling pathway3.05E-04
11GO:0061062: regulation of nematode larval development4.81E-04
12GO:0010271: regulation of chlorophyll catabolic process4.81E-04
13GO:0001736: establishment of planar polarity4.81E-04
14GO:0010024: phytochromobilin biosynthetic process4.81E-04
15GO:0045037: protein import into chloroplast stroma5.15E-04
16GO:0009825: multidimensional cell growth7.34E-04
17GO:0090506: axillary shoot meristem initiation7.83E-04
18GO:0080117: secondary growth7.83E-04
19GO:0006065: UDP-glucuronate biosynthetic process7.83E-04
20GO:0009926: auxin polar transport8.91E-04
21GO:0034059: response to anoxia1.12E-03
22GO:0007276: gamete generation1.12E-03
23GO:0010321: regulation of vegetative phase change1.12E-03
24GO:0006020: inositol metabolic process1.12E-03
25GO:0051513: regulation of monopolar cell growth1.12E-03
26GO:0042127: regulation of cell proliferation1.40E-03
27GO:0009956: radial pattern formation1.48E-03
28GO:0009741: response to brassinosteroid1.76E-03
29GO:0048497: maintenance of floral organ identity1.89E-03
30GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.99E-03
31GO:0010358: leaf shaping2.33E-03
32GO:0009913: epidermal cell differentiation2.33E-03
33GO:0048831: regulation of shoot system development2.33E-03
34GO:0006086: acetyl-CoA biosynthetic process from pyruvate2.33E-03
35GO:0003006: developmental process involved in reproduction2.33E-03
36GO:0010942: positive regulation of cell death2.33E-03
37GO:0009733: response to auxin2.51E-03
38GO:0006694: steroid biosynthetic process2.80E-03
39GO:0009942: longitudinal axis specification2.80E-03
40GO:0048509: regulation of meristem development2.80E-03
41GO:0009861: jasmonic acid and ethylene-dependent systemic resistance2.80E-03
42GO:0010019: chloroplast-nucleus signaling pathway2.80E-03
43GO:1900056: negative regulation of leaf senescence3.30E-03
44GO:0000082: G1/S transition of mitotic cell cycle3.30E-03
45GO:0010444: guard mother cell differentiation3.30E-03
46GO:0009610: response to symbiotic fungus3.30E-03
47GO:0010492: maintenance of shoot apical meristem identity3.82E-03
48GO:0000160: phosphorelay signal transduction system4.27E-03
49GO:0007186: G-protein coupled receptor signaling pathway4.38E-03
50GO:0007389: pattern specification process4.38E-03
51GO:0048507: meristem development4.95E-03
52GO:0048589: developmental growth4.95E-03
53GO:0009056: catabolic process4.95E-03
54GO:0005982: starch metabolic process5.56E-03
55GO:0006782: protoporphyrinogen IX biosynthetic process6.18E-03
56GO:0019538: protein metabolic process6.18E-03
57GO:0048829: root cap development6.18E-03
58GO:0009641: shade avoidance6.18E-03
59GO:0006949: syncytium formation6.18E-03
60GO:0009744: response to sucrose6.63E-03
61GO:0008285: negative regulation of cell proliferation6.84E-03
62GO:0009750: response to fructose6.84E-03
63GO:0048765: root hair cell differentiation6.84E-03
64GO:0071555: cell wall organization7.02E-03
65GO:0005983: starch catabolic process7.51E-03
66GO:0010582: floral meristem determinacy7.51E-03
67GO:0010152: pollen maturation7.51E-03
68GO:0010102: lateral root morphogenesis8.22E-03
69GO:0048467: gynoecium development8.94E-03
70GO:0009933: meristem structural organization8.94E-03
71GO:0010207: photosystem II assembly8.94E-03
72GO:0009736: cytokinin-activated signaling pathway8.94E-03
73GO:0010223: secondary shoot formation8.94E-03
74GO:0009887: animal organ morphogenesis8.94E-03
75GO:0010540: basipetal auxin transport8.94E-03
76GO:0080188: RNA-directed DNA methylation9.69E-03
77GO:0045892: negative regulation of transcription, DNA-templated1.18E-02
78GO:0019953: sexual reproduction1.21E-02
79GO:0006418: tRNA aminoacylation for protein translation1.21E-02
80GO:0043622: cortical microtubule organization1.21E-02
81GO:0009624: response to nematode1.28E-02
82GO:0006306: DNA methylation1.29E-02
83GO:0003333: amino acid transmembrane transport1.29E-02
84GO:0071215: cellular response to abscisic acid stimulus1.46E-02
85GO:0016042: lipid catabolic process1.46E-02
86GO:0001944: vasculature development1.46E-02
87GO:0048443: stamen development1.55E-02
88GO:0006284: base-excision repair1.55E-02
89GO:0010091: trichome branching1.55E-02
90GO:0070417: cellular response to cold1.64E-02
91GO:0000226: microtubule cytoskeleton organization1.74E-02
92GO:0000271: polysaccharide biosynthetic process1.74E-02
93GO:0010087: phloem or xylem histogenesis1.74E-02
94GO:0010268: brassinosteroid homeostasis1.83E-02
95GO:0045489: pectin biosynthetic process1.83E-02
96GO:0010305: leaf vascular tissue pattern formation1.83E-02
97GO:0009958: positive gravitropism1.83E-02
98GO:0006468: protein phosphorylation1.89E-02
99GO:0007018: microtubule-based movement1.93E-02
100GO:0048825: cotyledon development2.02E-02
101GO:0009749: response to glucose2.02E-02
102GO:0040008: regulation of growth2.11E-02
103GO:0071554: cell wall organization or biogenesis2.12E-02
104GO:0002229: defense response to oomycetes2.12E-02
105GO:0016132: brassinosteroid biosynthetic process2.12E-02
106GO:0031047: gene silencing by RNA2.23E-02
107GO:0032502: developmental process2.23E-02
108GO:0016125: sterol metabolic process2.44E-02
109GO:0019760: glucosinolate metabolic process2.44E-02
110GO:0010252: auxin homeostasis2.44E-02
111GO:0009828: plant-type cell wall loosening2.44E-02
112GO:0006470: protein dephosphorylation2.53E-02
113GO:0007166: cell surface receptor signaling pathway2.53E-02
114GO:0051607: defense response to virus2.65E-02
115GO:0010029: regulation of seed germination2.87E-02
116GO:0015995: chlorophyll biosynthetic process3.10E-02
117GO:0010411: xyloglucan metabolic process3.10E-02
118GO:0009826: unidimensional cell growth3.29E-02
119GO:0009817: defense response to fungus, incompatible interaction3.34E-02
120GO:0010311: lateral root formation3.46E-02
121GO:0009832: plant-type cell wall biogenesis3.46E-02
122GO:0006865: amino acid transport3.82E-02
123GO:0009867: jasmonic acid mediated signaling pathway3.95E-02
124GO:0016051: carbohydrate biosynthetic process3.95E-02
125GO:0048366: leaf development4.02E-02
126GO:0030001: metal ion transport4.33E-02
127GO:0051707: response to other organism4.73E-02
128GO:0006351: transcription, DNA-templated4.84E-02
129GO:0042546: cell wall biogenesis4.86E-02
RankGO TermAdjusted P value
1GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity0.00E+00
2GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor0.00E+00
3GO:0010011: auxin binding3.35E-05
4GO:0000829: inositol heptakisphosphate kinase activity2.16E-04
5GO:0000828: inositol hexakisphosphate kinase activity2.16E-04
6GO:0008568: microtubule-severing ATPase activity2.16E-04
7GO:0019203: carbohydrate phosphatase activity2.16E-04
8GO:0004832: valine-tRNA ligase activity2.16E-04
9GO:0033857: diphosphoinositol-pentakisphosphate kinase activity2.16E-04
10GO:0010012: steroid 22-alpha hydroxylase activity2.16E-04
11GO:0004109: coproporphyrinogen oxidase activity4.81E-04
12GO:0008805: carbon-monoxide oxygenase activity4.81E-04
13GO:0009884: cytokinin receptor activity4.81E-04
14GO:0017022: myosin binding4.81E-04
15GO:0010296: prenylcysteine methylesterase activity4.81E-04
16GO:0005034: osmosensor activity7.83E-04
17GO:0003979: UDP-glucose 6-dehydrogenase activity7.83E-04
18GO:0043424: protein histidine kinase binding9.92E-04
19GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity1.12E-03
20GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed1.48E-03
21GO:0010328: auxin influx transmembrane transporter activity1.48E-03
22GO:0005471: ATP:ADP antiporter activity1.89E-03
23GO:0008725: DNA-3-methyladenine glycosylase activity1.89E-03
24GO:0019900: kinase binding2.80E-03
25GO:0008138: protein tyrosine/serine/threonine phosphatase activity4.95E-03
26GO:0009672: auxin:proton symporter activity5.56E-03
27GO:0004673: protein histidine kinase activity6.18E-03
28GO:0010329: auxin efflux transmembrane transporter activity8.22E-03
29GO:0003725: double-stranded RNA binding8.22E-03
30GO:0000155: phosphorelay sensor kinase activity8.22E-03
31GO:0003712: transcription cofactor activity9.69E-03
32GO:0052689: carboxylic ester hydrolase activity1.05E-02
33GO:0042803: protein homodimerization activity1.23E-02
34GO:0003779: actin binding1.24E-02
35GO:0033612: receptor serine/threonine kinase binding1.29E-02
36GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.37E-02
37GO:0004672: protein kinase activity1.37E-02
38GO:0030570: pectate lyase activity1.46E-02
39GO:0004812: aminoacyl-tRNA ligase activity1.64E-02
40GO:0005515: protein binding1.73E-02
41GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity1.83E-02
42GO:0008565: protein transporter activity1.92E-02
43GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.06E-02
44GO:0016762: xyloglucan:xyloglucosyl transferase activity2.12E-02
45GO:0004518: nuclease activity2.23E-02
46GO:0008017: microtubule binding2.32E-02
47GO:0000156: phosphorelay response regulator activity2.33E-02
48GO:0016791: phosphatase activity2.44E-02
49GO:0016759: cellulose synthase activity2.44E-02
50GO:0016413: O-acetyltransferase activity2.65E-02
51GO:0042802: identical protein binding2.81E-02
52GO:0030247: polysaccharide binding3.10E-02
53GO:0004721: phosphoprotein phosphatase activity3.10E-02
54GO:0016798: hydrolase activity, acting on glycosyl bonds3.10E-02
55GO:0008236: serine-type peptidase activity3.22E-02
56GO:0005096: GTPase activator activity3.46E-02
57GO:0016788: hydrolase activity, acting on ester bonds3.49E-02
58GO:0050897: cobalt ion binding3.70E-02
59GO:0004712: protein serine/threonine/tyrosine kinase activity4.20E-02
60GO:0043621: protein self-association5.00E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0009986: cell surface3.30E-03
3GO:0000419: DNA-directed RNA polymerase V complex1.05E-02
4GO:0009706: chloroplast inner membrane1.28E-02
5GO:0009532: plastid stroma1.29E-02
6GO:0005871: kinesin complex1.64E-02
7GO:0005623: cell1.64E-02
8GO:0046658: anchored component of plasma membrane2.93E-02
9GO:0016021: integral component of membrane3.53E-02
10GO:0005874: microtubule4.09E-02
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Gene type



Gene DE type