GO Enrichment Analysis of Co-expressed Genes with
AT1G66330
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016118: carotenoid catabolic process | 0.00E+00 |
| 2 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 3 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 4 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 5 | GO:0010028: xanthophyll cycle | 0.00E+00 |
| 6 | GO:0015843: methylammonium transport | 0.00E+00 |
| 7 | GO:0019252: starch biosynthetic process | 1.06E-04 |
| 8 | GO:0009657: plastid organization | 1.50E-04 |
| 9 | GO:0080112: seed growth | 1.62E-04 |
| 10 | GO:0043953: protein transport by the Tat complex | 1.62E-04 |
| 11 | GO:0000476: maturation of 4.5S rRNA | 1.62E-04 |
| 12 | GO:0000967: rRNA 5'-end processing | 1.62E-04 |
| 13 | GO:1905039: carboxylic acid transmembrane transport | 1.62E-04 |
| 14 | GO:1905200: gibberellic acid transmembrane transport | 1.62E-04 |
| 15 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 1.62E-04 |
| 16 | GO:0065002: intracellular protein transmembrane transport | 1.62E-04 |
| 17 | GO:0043686: co-translational protein modification | 1.62E-04 |
| 18 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.69E-04 |
| 19 | GO:0006898: receptor-mediated endocytosis | 3.69E-04 |
| 20 | GO:0016124: xanthophyll catabolic process | 3.69E-04 |
| 21 | GO:0000256: allantoin catabolic process | 3.69E-04 |
| 22 | GO:0042325: regulation of phosphorylation | 3.69E-04 |
| 23 | GO:1904143: positive regulation of carotenoid biosynthetic process | 3.69E-04 |
| 24 | GO:0016122: xanthophyll metabolic process | 3.69E-04 |
| 25 | GO:0016121: carotene catabolic process | 3.69E-04 |
| 26 | GO:0034470: ncRNA processing | 3.69E-04 |
| 27 | GO:0010136: ureide catabolic process | 6.04E-04 |
| 28 | GO:0034051: negative regulation of plant-type hypersensitive response | 6.04E-04 |
| 29 | GO:0006696: ergosterol biosynthetic process | 6.04E-04 |
| 30 | GO:0005977: glycogen metabolic process | 6.04E-04 |
| 31 | GO:0006145: purine nucleobase catabolic process | 8.63E-04 |
| 32 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 8.63E-04 |
| 33 | GO:0015696: ammonium transport | 8.63E-04 |
| 34 | GO:0071786: endoplasmic reticulum tubular network organization | 8.63E-04 |
| 35 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.63E-04 |
| 36 | GO:0045338: farnesyl diphosphate metabolic process | 8.63E-04 |
| 37 | GO:0006020: inositol metabolic process | 8.63E-04 |
| 38 | GO:0009152: purine ribonucleotide biosynthetic process | 8.63E-04 |
| 39 | GO:0010601: positive regulation of auxin biosynthetic process | 8.63E-04 |
| 40 | GO:0046653: tetrahydrofolate metabolic process | 8.63E-04 |
| 41 | GO:0015994: chlorophyll metabolic process | 1.14E-03 |
| 42 | GO:0072488: ammonium transmembrane transport | 1.14E-03 |
| 43 | GO:2000122: negative regulation of stomatal complex development | 1.14E-03 |
| 44 | GO:0006021: inositol biosynthetic process | 1.14E-03 |
| 45 | GO:0071483: cellular response to blue light | 1.14E-03 |
| 46 | GO:0010021: amylopectin biosynthetic process | 1.14E-03 |
| 47 | GO:0010037: response to carbon dioxide | 1.14E-03 |
| 48 | GO:0015976: carbon utilization | 1.14E-03 |
| 49 | GO:0009765: photosynthesis, light harvesting | 1.14E-03 |
| 50 | GO:0006564: L-serine biosynthetic process | 1.45E-03 |
| 51 | GO:0009904: chloroplast accumulation movement | 1.45E-03 |
| 52 | GO:0031365: N-terminal protein amino acid modification | 1.45E-03 |
| 53 | GO:0032502: developmental process | 1.56E-03 |
| 54 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.78E-03 |
| 55 | GO:0046855: inositol phosphate dephosphorylation | 1.78E-03 |
| 56 | GO:1902456: regulation of stomatal opening | 1.78E-03 |
| 57 | GO:0009643: photosynthetic acclimation | 1.78E-03 |
| 58 | GO:0006810: transport | 1.92E-03 |
| 59 | GO:0010027: thylakoid membrane organization | 2.10E-03 |
| 60 | GO:1901259: chloroplast rRNA processing | 2.14E-03 |
| 61 | GO:0048280: vesicle fusion with Golgi apparatus | 2.14E-03 |
| 62 | GO:0009903: chloroplast avoidance movement | 2.14E-03 |
| 63 | GO:0071333: cellular response to glucose stimulus | 2.14E-03 |
| 64 | GO:0009955: adaxial/abaxial pattern specification | 2.14E-03 |
| 65 | GO:0048437: floral organ development | 2.52E-03 |
| 66 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.52E-03 |
| 67 | GO:0009645: response to low light intensity stimulus | 2.52E-03 |
| 68 | GO:1900056: negative regulation of leaf senescence | 2.52E-03 |
| 69 | GO:0010078: maintenance of root meristem identity | 2.91E-03 |
| 70 | GO:0052543: callose deposition in cell wall | 2.91E-03 |
| 71 | GO:0043562: cellular response to nitrogen levels | 3.33E-03 |
| 72 | GO:0006098: pentose-phosphate shunt | 3.77E-03 |
| 73 | GO:0009821: alkaloid biosynthetic process | 3.77E-03 |
| 74 | GO:0098656: anion transmembrane transport | 3.77E-03 |
| 75 | GO:0009658: chloroplast organization | 4.21E-03 |
| 76 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.22E-03 |
| 77 | GO:0005982: starch metabolic process | 4.22E-03 |
| 78 | GO:0010114: response to red light | 4.45E-03 |
| 79 | GO:0006896: Golgi to vacuole transport | 4.69E-03 |
| 80 | GO:0009773: photosynthetic electron transport in photosystem I | 5.19E-03 |
| 81 | GO:0015770: sucrose transport | 5.19E-03 |
| 82 | GO:0009684: indoleacetic acid biosynthetic process | 5.19E-03 |
| 83 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.69E-03 |
| 84 | GO:0006790: sulfur compound metabolic process | 5.69E-03 |
| 85 | GO:0010588: cotyledon vascular tissue pattern formation | 6.22E-03 |
| 86 | GO:0006094: gluconeogenesis | 6.22E-03 |
| 87 | GO:0009767: photosynthetic electron transport chain | 6.22E-03 |
| 88 | GO:0010020: chloroplast fission | 6.76E-03 |
| 89 | GO:0007015: actin filament organization | 6.76E-03 |
| 90 | GO:0048467: gynoecium development | 6.76E-03 |
| 91 | GO:0005975: carbohydrate metabolic process | 7.19E-03 |
| 92 | GO:0048367: shoot system development | 7.31E-03 |
| 93 | GO:0009901: anther dehiscence | 7.32E-03 |
| 94 | GO:0019853: L-ascorbic acid biosynthetic process | 7.32E-03 |
| 95 | GO:0046854: phosphatidylinositol phosphorylation | 7.32E-03 |
| 96 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.90E-03 |
| 97 | GO:0009624: response to nematode | 8.52E-03 |
| 98 | GO:0009742: brassinosteroid mediated signaling pathway | 9.04E-03 |
| 99 | GO:0009768: photosynthesis, light harvesting in photosystem I | 9.09E-03 |
| 100 | GO:0061077: chaperone-mediated protein folding | 9.72E-03 |
| 101 | GO:0009269: response to desiccation | 9.72E-03 |
| 102 | GO:0003333: amino acid transmembrane transport | 9.72E-03 |
| 103 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.04E-02 |
| 104 | GO:0019748: secondary metabolic process | 1.04E-02 |
| 105 | GO:0071215: cellular response to abscisic acid stimulus | 1.10E-02 |
| 106 | GO:0006012: galactose metabolic process | 1.10E-02 |
| 107 | GO:0009058: biosynthetic process | 1.13E-02 |
| 108 | GO:0009306: protein secretion | 1.17E-02 |
| 109 | GO:0042147: retrograde transport, endosome to Golgi | 1.24E-02 |
| 110 | GO:0016117: carotenoid biosynthetic process | 1.24E-02 |
| 111 | GO:0080022: primary root development | 1.31E-02 |
| 112 | GO:0010087: phloem or xylem histogenesis | 1.31E-02 |
| 113 | GO:0009958: positive gravitropism | 1.38E-02 |
| 114 | GO:0006520: cellular amino acid metabolic process | 1.38E-02 |
| 115 | GO:0009741: response to brassinosteroid | 1.38E-02 |
| 116 | GO:0009646: response to absence of light | 1.45E-02 |
| 117 | GO:0006623: protein targeting to vacuole | 1.52E-02 |
| 118 | GO:0048825: cotyledon development | 1.52E-02 |
| 119 | GO:0009556: microsporogenesis | 1.52E-02 |
| 120 | GO:0009851: auxin biosynthetic process | 1.52E-02 |
| 121 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.60E-02 |
| 122 | GO:0009630: gravitropism | 1.67E-02 |
| 123 | GO:1901657: glycosyl compound metabolic process | 1.75E-02 |
| 124 | GO:0009567: double fertilization forming a zygote and endosperm | 1.83E-02 |
| 125 | GO:0009416: response to light stimulus | 1.88E-02 |
| 126 | GO:0055114: oxidation-reduction process | 1.92E-02 |
| 127 | GO:0016126: sterol biosynthetic process | 2.07E-02 |
| 128 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.33E-02 |
| 129 | GO:0016311: dephosphorylation | 2.42E-02 |
| 130 | GO:0018298: protein-chromophore linkage | 2.51E-02 |
| 131 | GO:0006811: ion transport | 2.69E-02 |
| 132 | GO:0010218: response to far red light | 2.69E-02 |
| 133 | GO:0048527: lateral root development | 2.78E-02 |
| 134 | GO:0010119: regulation of stomatal movement | 2.78E-02 |
| 135 | GO:0009910: negative regulation of flower development | 2.78E-02 |
| 136 | GO:0006865: amino acid transport | 2.87E-02 |
| 137 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.94E-02 |
| 138 | GO:0009637: response to blue light | 2.97E-02 |
| 139 | GO:0009853: photorespiration | 2.97E-02 |
| 140 | GO:0006631: fatty acid metabolic process | 3.35E-02 |
| 141 | GO:0008283: cell proliferation | 3.55E-02 |
| 142 | GO:0000209: protein polyubiquitination | 3.66E-02 |
| 143 | GO:0009644: response to high light intensity | 3.76E-02 |
| 144 | GO:0016042: lipid catabolic process | 4.07E-02 |
| 145 | GO:0009408: response to heat | 4.18E-02 |
| 146 | GO:0006364: rRNA processing | 4.39E-02 |
| 147 | GO:0006813: potassium ion transport | 4.39E-02 |
| 148 | GO:0008152: metabolic process | 4.60E-02 |
| 149 | GO:0006857: oligopeptide transport | 4.61E-02 |
| 150 | GO:0006096: glycolytic process | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 3 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 4 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 5 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 6 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 7 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 8 | GO:0009011: starch synthase activity | 2.06E-05 |
| 9 | GO:0042586: peptide deformylase activity | 1.62E-04 |
| 10 | GO:0004856: xylulokinase activity | 1.62E-04 |
| 11 | GO:1905201: gibberellin transmembrane transporter activity | 1.62E-04 |
| 12 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 3.69E-04 |
| 13 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.69E-04 |
| 14 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.69E-04 |
| 15 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 3.69E-04 |
| 16 | GO:0019156: isoamylase activity | 3.69E-04 |
| 17 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 3.69E-04 |
| 18 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 3.69E-04 |
| 19 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.69E-04 |
| 20 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.69E-04 |
| 21 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.69E-04 |
| 22 | GO:0033201: alpha-1,4-glucan synthase activity | 3.69E-04 |
| 23 | GO:0004373: glycogen (starch) synthase activity | 6.04E-04 |
| 24 | GO:0004848: ureidoglycolate hydrolase activity | 6.04E-04 |
| 25 | GO:0004751: ribose-5-phosphate isomerase activity | 6.04E-04 |
| 26 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 6.04E-04 |
| 27 | GO:0008864: formyltetrahydrofolate deformylase activity | 6.04E-04 |
| 28 | GO:0022890: inorganic cation transmembrane transporter activity | 8.63E-04 |
| 29 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.14E-03 |
| 30 | GO:0016846: carbon-sulfur lyase activity | 1.45E-03 |
| 31 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.45E-03 |
| 32 | GO:0005275: amine transmembrane transporter activity | 1.45E-03 |
| 33 | GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity | 1.45E-03 |
| 34 | GO:0004629: phospholipase C activity | 1.78E-03 |
| 35 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.78E-03 |
| 36 | GO:0042578: phosphoric ester hydrolase activity | 1.78E-03 |
| 37 | GO:0004556: alpha-amylase activity | 1.78E-03 |
| 38 | GO:0008519: ammonium transmembrane transporter activity | 1.78E-03 |
| 39 | GO:0004332: fructose-bisphosphate aldolase activity | 1.78E-03 |
| 40 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.14E-03 |
| 41 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.14E-03 |
| 42 | GO:0004435: phosphatidylinositol phospholipase C activity | 2.14E-03 |
| 43 | GO:0008195: phosphatidate phosphatase activity | 2.14E-03 |
| 44 | GO:0004033: aldo-keto reductase (NADP) activity | 2.91E-03 |
| 45 | GO:0003993: acid phosphatase activity | 3.61E-03 |
| 46 | GO:0015174: basic amino acid transmembrane transporter activity | 4.22E-03 |
| 47 | GO:0016844: strictosidine synthase activity | 4.22E-03 |
| 48 | GO:0015020: glucuronosyltransferase activity | 4.69E-03 |
| 49 | GO:0015386: potassium:proton antiporter activity | 5.19E-03 |
| 50 | GO:0008515: sucrose transmembrane transporter activity | 5.19E-03 |
| 51 | GO:0008559: xenobiotic-transporting ATPase activity | 5.19E-03 |
| 52 | GO:0003725: double-stranded RNA binding | 6.22E-03 |
| 53 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.22E-03 |
| 54 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.22E-03 |
| 55 | GO:0004089: carbonate dehydratase activity | 6.22E-03 |
| 56 | GO:0031072: heat shock protein binding | 6.22E-03 |
| 57 | GO:0019888: protein phosphatase regulator activity | 6.22E-03 |
| 58 | GO:0015171: amino acid transmembrane transporter activity | 6.63E-03 |
| 59 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.76E-03 |
| 60 | GO:0051119: sugar transmembrane transporter activity | 7.32E-03 |
| 61 | GO:0004871: signal transducer activity | 7.38E-03 |
| 62 | GO:0031409: pigment binding | 7.90E-03 |
| 63 | GO:0005528: FK506 binding | 8.48E-03 |
| 64 | GO:0005216: ion channel activity | 9.09E-03 |
| 65 | GO:0015079: potassium ion transmembrane transporter activity | 9.09E-03 |
| 66 | GO:0008514: organic anion transmembrane transporter activity | 1.17E-02 |
| 67 | GO:0008565: protein transporter activity | 1.28E-02 |
| 68 | GO:0003713: transcription coactivator activity | 1.38E-02 |
| 69 | GO:0015299: solute:proton antiporter activity | 1.45E-02 |
| 70 | GO:0048038: quinone binding | 1.60E-02 |
| 71 | GO:0008237: metallopeptidase activity | 1.91E-02 |
| 72 | GO:0016597: amino acid binding | 1.99E-02 |
| 73 | GO:0016168: chlorophyll binding | 2.16E-02 |
| 74 | GO:0102483: scopolin beta-glucosidase activity | 2.33E-02 |
| 75 | GO:0016788: hydrolase activity, acting on ester bonds | 2.34E-02 |
| 76 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.78E-02 |
| 77 | GO:0019825: oxygen binding | 2.93E-02 |
| 78 | GO:0008422: beta-glucosidase activity | 3.16E-02 |
| 79 | GO:0000149: SNARE binding | 3.16E-02 |
| 80 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.16E-02 |
| 81 | GO:0005484: SNAP receptor activity | 3.55E-02 |
| 82 | GO:0004185: serine-type carboxypeptidase activity | 3.55E-02 |
| 83 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.97E-02 |
| 84 | GO:0051287: NAD binding | 4.07E-02 |
| 85 | GO:0031625: ubiquitin protein ligase binding | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.39E-14 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.54E-08 |
| 4 | GO:0031969: chloroplast membrane | 1.42E-06 |
| 5 | GO:0033281: TAT protein transport complex | 4.78E-06 |
| 6 | GO:0009570: chloroplast stroma | 5.52E-05 |
| 7 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.62E-04 |
| 8 | GO:0031361: integral component of thylakoid membrane | 1.62E-04 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 2.27E-04 |
| 10 | GO:0009534: chloroplast thylakoid | 3.15E-04 |
| 11 | GO:0030095: chloroplast photosystem II | 4.47E-04 |
| 12 | GO:0009941: chloroplast envelope | 7.74E-04 |
| 13 | GO:0030658: transport vesicle membrane | 8.63E-04 |
| 14 | GO:0071782: endoplasmic reticulum tubular network | 8.63E-04 |
| 15 | GO:0009517: PSII associated light-harvesting complex II | 1.14E-03 |
| 16 | GO:0009526: plastid envelope | 1.14E-03 |
| 17 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.91E-03 |
| 18 | GO:0031982: vesicle | 2.91E-03 |
| 19 | GO:0012507: ER to Golgi transport vesicle membrane | 2.91E-03 |
| 20 | GO:0009501: amyloplast | 2.91E-03 |
| 21 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.77E-03 |
| 22 | GO:0031977: thylakoid lumen | 4.10E-03 |
| 23 | GO:0000159: protein phosphatase type 2A complex | 5.19E-03 |
| 24 | GO:0009579: thylakoid | 5.83E-03 |
| 25 | GO:0005789: endoplasmic reticulum membrane | 7.27E-03 |
| 26 | GO:0030076: light-harvesting complex | 7.32E-03 |
| 27 | GO:0009706: chloroplast inner membrane | 8.52E-03 |
| 28 | GO:0005773: vacuole | 8.63E-03 |
| 29 | GO:0009654: photosystem II oxygen evolving complex | 9.09E-03 |
| 30 | GO:0042651: thylakoid membrane | 9.09E-03 |
| 31 | GO:0015935: small ribosomal subunit | 9.72E-03 |
| 32 | GO:0010287: plastoglobule | 1.01E-02 |
| 33 | GO:0005887: integral component of plasma membrane | 1.34E-02 |
| 34 | GO:0009522: photosystem I | 1.45E-02 |
| 35 | GO:0009523: photosystem II | 1.52E-02 |
| 36 | GO:0019898: extrinsic component of membrane | 1.52E-02 |
| 37 | GO:0009536: plastid | 1.76E-02 |
| 38 | GO:0009707: chloroplast outer membrane | 2.51E-02 |
| 39 | GO:0000325: plant-type vacuole | 2.78E-02 |
| 40 | GO:0031902: late endosome membrane | 3.35E-02 |
| 41 | GO:0031201: SNARE complex | 3.35E-02 |