Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G66150

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006399: tRNA metabolic process0.00E+00
2GO:2000505: regulation of energy homeostasis0.00E+00
3GO:0010081: regulation of inflorescence meristem growth0.00E+00
4GO:0051503: adenine nucleotide transport0.00E+00
5GO:0045176: apical protein localization0.00E+00
6GO:0071000: response to magnetism0.00E+00
7GO:0009583: detection of light stimulus0.00E+00
8GO:0010203: response to very low fluence red light stimulus0.00E+00
9GO:0000372: Group I intron splicing0.00E+00
10GO:1905177: tracheary element differentiation0.00E+00
11GO:0006114: glycerol biosynthetic process0.00E+00
12GO:0000373: Group II intron splicing1.63E-05
13GO:0045038: protein import into chloroplast thylakoid membrane9.49E-05
14GO:0015798: myo-inositol transport3.04E-04
15GO:0072387: flavin adenine dinucleotide metabolic process3.04E-04
16GO:0010201: response to continuous far red light stimulus by the high-irradiance response system3.04E-04
17GO:0043087: regulation of GTPase activity3.04E-04
18GO:2000021: regulation of ion homeostasis3.04E-04
19GO:0006436: tryptophanyl-tRNA aminoacylation3.04E-04
20GO:0051247: positive regulation of protein metabolic process3.04E-04
21GO:0090548: response to nitrate starvation3.04E-04
22GO:0000066: mitochondrial ornithine transport3.04E-04
23GO:2000905: negative regulation of starch metabolic process3.04E-04
24GO:0034757: negative regulation of iron ion transport3.04E-04
25GO:0006419: alanyl-tRNA aminoacylation3.04E-04
26GO:0015969: guanosine tetraphosphate metabolic process3.04E-04
27GO:0000012: single strand break repair3.04E-04
28GO:0043266: regulation of potassium ion transport3.04E-04
29GO:1902025: nitrate import3.04E-04
30GO:0010080: regulation of floral meristem growth3.04E-04
31GO:0048564: photosystem I assembly3.09E-04
32GO:0048316: seed development5.20E-04
33GO:0009638: phototropism5.40E-04
34GO:0009658: chloroplast organization6.24E-04
35GO:0010289: homogalacturonan biosynthetic process6.66E-04
36GO:0010343: singlet oxygen-mediated programmed cell death6.66E-04
37GO:1901529: positive regulation of anion channel activity6.66E-04
38GO:0060359: response to ammonium ion6.66E-04
39GO:0048255: mRNA stabilization6.66E-04
40GO:1900871: chloroplast mRNA modification6.66E-04
41GO:0010617: circadian regulation of calcium ion oscillation6.66E-04
42GO:0010271: regulation of chlorophyll catabolic process6.66E-04
43GO:1901959: positive regulation of cutin biosynthetic process6.66E-04
44GO:0006435: threonyl-tRNA aminoacylation6.66E-04
45GO:0099402: plant organ development6.66E-04
46GO:0010029: regulation of seed germination6.89E-04
47GO:0018298: protein-chromophore linkage8.97E-04
48GO:0006094: gluconeogenesis9.40E-04
49GO:0010207: photosystem II assembly1.06E-03
50GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.08E-03
51GO:0006696: ergosterol biosynthetic process1.08E-03
52GO:0043157: response to cation stress1.08E-03
53GO:1902448: positive regulation of shade avoidance1.08E-03
54GO:0080117: secondary growth1.08E-03
55GO:0048586: regulation of long-day photoperiodism, flowering1.08E-03
56GO:0010022: meristem determinacy1.08E-03
57GO:0017006: protein-tetrapyrrole linkage1.08E-03
58GO:0010623: programmed cell death involved in cell development1.08E-03
59GO:1901672: positive regulation of systemic acquired resistance1.08E-03
60GO:1904278: positive regulation of wax biosynthetic process1.08E-03
61GO:2001141: regulation of RNA biosynthetic process1.55E-03
62GO:0090308: regulation of methylation-dependent chromatin silencing1.55E-03
63GO:0046836: glycolipid transport1.55E-03
64GO:0051513: regulation of monopolar cell growth1.55E-03
65GO:0051639: actin filament network formation1.55E-03
66GO:0034059: response to anoxia1.55E-03
67GO:0009584: detection of visible light1.55E-03
68GO:0046902: regulation of mitochondrial membrane permeability1.55E-03
69GO:0009226: nucleotide-sugar biosynthetic process1.55E-03
70GO:1901332: negative regulation of lateral root development1.55E-03
71GO:1990019: protein storage vacuole organization1.55E-03
72GO:0006730: one-carbon metabolic process1.92E-03
73GO:0051781: positive regulation of cell division2.07E-03
74GO:0051764: actin crosslink formation2.07E-03
75GO:0051322: anaphase2.07E-03
76GO:0006661: phosphatidylinositol biosynthetic process2.07E-03
77GO:2000306: positive regulation of photomorphogenesis2.07E-03
78GO:0006183: GTP biosynthetic process2.07E-03
79GO:0045723: positive regulation of fatty acid biosynthetic process2.07E-03
80GO:0010508: positive regulation of autophagy2.07E-03
81GO:0008295: spermidine biosynthetic process2.07E-03
82GO:1902347: response to strigolactone2.07E-03
83GO:1902183: regulation of shoot apical meristem development2.65E-03
84GO:0016123: xanthophyll biosynthetic process2.65E-03
85GO:0010158: abaxial cell fate specification2.65E-03
86GO:0080110: sporopollenin biosynthetic process2.65E-03
87GO:0010117: photoprotection2.65E-03
88GO:0046283: anthocyanin-containing compound metabolic process2.65E-03
89GO:0046323: glucose import2.88E-03
90GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione3.27E-03
91GO:0048827: phyllome development3.27E-03
92GO:0009959: negative gravitropism3.27E-03
93GO:0006555: methionine metabolic process3.27E-03
94GO:0060918: auxin transport3.27E-03
95GO:0048831: regulation of shoot system development3.27E-03
96GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.27E-03
97GO:1901371: regulation of leaf morphogenesis3.27E-03
98GO:0009793: embryo development ending in seed dormancy3.76E-03
99GO:0032502: developmental process3.79E-03
100GO:0009630: gravitropism3.79E-03
101GO:0010310: regulation of hydrogen peroxide metabolic process3.93E-03
102GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.93E-03
103GO:0017148: negative regulation of translation3.93E-03
104GO:0048509: regulation of meristem development3.93E-03
105GO:0005975: carbohydrate metabolic process4.17E-03
106GO:0010161: red light signaling pathway4.64E-03
107GO:0006955: immune response4.64E-03
108GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.64E-03
109GO:0006400: tRNA modification4.64E-03
110GO:0051510: regulation of unidimensional cell growth4.64E-03
111GO:0009416: response to light stimulus4.94E-03
112GO:0009911: positive regulation of flower development5.13E-03
113GO:0000105: histidine biosynthetic process5.39E-03
114GO:0009690: cytokinin metabolic process5.39E-03
115GO:0042255: ribosome assembly5.39E-03
116GO:0006353: DNA-templated transcription, termination5.39E-03
117GO:0071555: cell wall organization5.40E-03
118GO:0071482: cellular response to light stimulus6.18E-03
119GO:0009657: plastid organization6.18E-03
120GO:0046685: response to arsenic-containing substance7.01E-03
121GO:0090305: nucleic acid phosphodiester bond hydrolysis7.01E-03
122GO:0006098: pentose-phosphate shunt7.01E-03
123GO:0010206: photosystem II repair7.01E-03
124GO:2000024: regulation of leaf development7.01E-03
125GO:0010218: response to far red light7.38E-03
126GO:1900426: positive regulation of defense response to bacterium7.87E-03
127GO:0035999: tetrahydrofolate interconversion7.87E-03
128GO:0010018: far-red light signaling pathway7.87E-03
129GO:0009086: methionine biosynthetic process7.87E-03
130GO:0009637: response to blue light8.49E-03
131GO:0006949: syncytium formation8.77E-03
132GO:0031627: telomeric loop formation8.77E-03
133GO:0009299: mRNA transcription8.77E-03
134GO:0006535: cysteine biosynthetic process from serine8.77E-03
135GO:0006839: mitochondrial transport9.68E-03
136GO:0010216: maintenance of DNA methylation9.71E-03
137GO:0006352: DNA-templated transcription, initiation9.71E-03
138GO:0006415: translational termination9.71E-03
139GO:0045037: protein import into chloroplast stroma1.07E-02
140GO:0010582: floral meristem determinacy1.07E-02
141GO:0009640: photomorphogenesis1.10E-02
142GO:0010114: response to red light1.10E-02
143GO:0042546: cell wall biogenesis1.14E-02
144GO:0010229: inflorescence development1.17E-02
145GO:0010075: regulation of meristem growth1.17E-02
146GO:0009725: response to hormone1.17E-02
147GO:0009767: photosynthetic electron transport chain1.17E-02
148GO:0009785: blue light signaling pathway1.17E-02
149GO:0009644: response to high light intensity1.19E-02
150GO:0009636: response to toxic substance1.23E-02
151GO:0009887: animal organ morphogenesis1.27E-02
152GO:0010540: basipetal auxin transport1.27E-02
153GO:0006302: double-strand break repair1.27E-02
154GO:0090351: seedling development1.38E-02
155GO:0009585: red, far-red light phototransduction1.48E-02
156GO:0042753: positive regulation of circadian rhythm1.49E-02
157GO:0006289: nucleotide-excision repair1.60E-02
158GO:2000377: regulation of reactive oxygen species metabolic process1.60E-02
159GO:0005992: trehalose biosynthetic process1.60E-02
160GO:0019344: cysteine biosynthetic process1.60E-02
161GO:0009944: polarity specification of adaxial/abaxial axis1.60E-02
162GO:0051017: actin filament bundle assembly1.60E-02
163GO:0006825: copper ion transport1.72E-02
164GO:0006418: tRNA aminoacylation for protein translation1.72E-02
165GO:0006096: glycolytic process1.75E-02
166GO:0016998: cell wall macromolecule catabolic process1.84E-02
167GO:0010431: seed maturation1.84E-02
168GO:0030245: cellulose catabolic process1.96E-02
169GO:0035428: hexose transmembrane transport1.96E-02
170GO:0009740: gibberellic acid mediated signaling pathway1.99E-02
171GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.09E-02
172GO:0071215: cellular response to abscisic acid stimulus2.09E-02
173GO:0010089: xylem development2.22E-02
174GO:0010584: pollen exine formation2.22E-02
175GO:0019722: calcium-mediated signaling2.22E-02
176GO:0016117: carotenoid biosynthetic process2.35E-02
177GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.35E-02
178GO:0070417: cellular response to cold2.35E-02
179GO:0008033: tRNA processing2.48E-02
180GO:0010087: phloem or xylem histogenesis2.48E-02
181GO:0010118: stomatal movement2.48E-02
182GO:0010268: brassinosteroid homeostasis2.62E-02
183GO:0045489: pectin biosynthetic process2.62E-02
184GO:0010154: fruit development2.62E-02
185GO:0042752: regulation of circadian rhythm2.76E-02
186GO:0009646: response to absence of light2.76E-02
187GO:0048544: recognition of pollen2.76E-02
188GO:0008654: phospholipid biosynthetic process2.90E-02
189GO:0048825: cotyledon development2.90E-02
190GO:0016132: brassinosteroid biosynthetic process3.04E-02
191GO:0007264: small GTPase mediated signal transduction3.19E-02
192GO:0010583: response to cyclopentenone3.19E-02
193GO:0009828: plant-type cell wall loosening3.49E-02
194GO:0016125: sterol metabolic process3.49E-02
195GO:0019760: glucosinolate metabolic process3.49E-02
196GO:0009639: response to red or far red light3.49E-02
197GO:0007267: cell-cell signaling3.64E-02
198GO:0000910: cytokinesis3.79E-02
199GO:0016126: sterol biosynthetic process3.95E-02
200GO:0001666: response to hypoxia3.95E-02
201GO:0010027: thylakoid membrane organization3.95E-02
202GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.11E-02
203GO:0010411: xyloglucan metabolic process4.44E-02
204GO:0016311: dephosphorylation4.60E-02
205GO:0048481: plant ovule development4.77E-02
206GO:0009817: defense response to fungus, incompatible interaction4.77E-02
207GO:0000160: phosphorelay signal transduction system4.94E-02
RankGO TermAdjusted P value
1GO:0046905: phytoene synthase activity0.00E+00
2GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
3GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
4GO:0005048: signal sequence binding0.00E+00
5GO:0043136: glycerol-3-phosphatase activity0.00E+00
6GO:0000121: glycerol-1-phosphatase activity0.00E+00
7GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity0.00E+00
8GO:0050613: delta14-sterol reductase activity0.00E+00
9GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
10GO:0005471: ATP:ADP antiporter activity9.49E-05
11GO:0004462: lactoylglutathione lyase activity1.37E-04
12GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.04E-04
13GO:0004830: tryptophan-tRNA ligase activity3.04E-04
14GO:0031516: far-red light photoreceptor activity3.04E-04
15GO:0003879: ATP phosphoribosyltransferase activity3.04E-04
16GO:0042834: peptidoglycan binding3.04E-04
17GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity3.04E-04
18GO:0004813: alanine-tRNA ligase activity3.04E-04
19GO:0005290: L-histidine transmembrane transporter activity3.04E-04
20GO:0004008: copper-exporting ATPase activity3.04E-04
21GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity3.04E-04
22GO:0051996: squalene synthase activity3.04E-04
23GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity3.04E-04
24GO:0004673: protein histidine kinase activity6.31E-04
25GO:0050017: L-3-cyanoalanine synthase activity6.66E-04
26GO:0009883: red or far-red light photoreceptor activity6.66E-04
27GO:0004326: tetrahydrofolylpolyglutamate synthase activity6.66E-04
28GO:0043425: bHLH transcription factor binding6.66E-04
29GO:0003938: IMP dehydrogenase activity6.66E-04
30GO:0004766: spermidine synthase activity6.66E-04
31GO:0004829: threonine-tRNA ligase activity6.66E-04
32GO:0000064: L-ornithine transmembrane transporter activity6.66E-04
33GO:0008728: GTP diphosphokinase activity6.66E-04
34GO:0004310: farnesyl-diphosphate farnesyltransferase activity6.66E-04
35GO:0009884: cytokinin receptor activity6.66E-04
36GO:0005366: myo-inositol:proton symporter activity6.66E-04
37GO:0048531: beta-1,3-galactosyltransferase activity6.66E-04
38GO:0000155: phosphorelay sensor kinase activity9.40E-04
39GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.06E-03
40GO:0005034: osmosensor activity1.08E-03
41GO:0052692: raffinose alpha-galactosidase activity1.08E-03
42GO:0003913: DNA photolyase activity1.08E-03
43GO:0004557: alpha-galactosidase activity1.08E-03
44GO:0008020: G-protein coupled photoreceptor activity1.08E-03
45GO:0009882: blue light photoreceptor activity1.55E-03
46GO:0015189: L-lysine transmembrane transporter activity1.55E-03
47GO:0017089: glycolipid transporter activity1.55E-03
48GO:0005354: galactose transmembrane transporter activity1.55E-03
49GO:0016149: translation release factor activity, codon specific1.55E-03
50GO:0015181: arginine transmembrane transporter activity1.55E-03
51GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.55E-03
52GO:0001053: plastid sigma factor activity2.07E-03
53GO:0051861: glycolipid binding2.07E-03
54GO:0016987: sigma factor activity2.07E-03
55GO:0070628: proteasome binding2.07E-03
56GO:0052793: pectin acetylesterase activity2.07E-03
57GO:0042277: peptide binding2.07E-03
58GO:0042802: identical protein binding2.17E-03
59GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.32E-03
60GO:0003690: double-stranded DNA binding2.53E-03
61GO:0005355: glucose transmembrane transporter activity3.09E-03
62GO:0004332: fructose-bisphosphate aldolase activity3.27E-03
63GO:0031593: polyubiquitin binding3.27E-03
64GO:0004518: nuclease activity3.79E-03
65GO:0019900: kinase binding3.93E-03
66GO:0004124: cysteine synthase activity3.93E-03
67GO:0004017: adenylate kinase activity3.93E-03
68GO:0009881: photoreceptor activity4.64E-03
69GO:0008312: 7S RNA binding5.39E-03
70GO:0043022: ribosome binding5.39E-03
71GO:0004871: signal transducer activity5.73E-03
72GO:0005375: copper ion transmembrane transporter activity6.18E-03
73GO:0015144: carbohydrate transmembrane transporter activity6.34E-03
74GO:0003747: translation release factor activity7.01E-03
75GO:0071949: FAD binding7.01E-03
76GO:0005096: GTPase activator activity7.03E-03
77GO:0005351: sugar:proton symporter activity7.39E-03
78GO:0030955: potassium ion binding7.87E-03
79GO:0004743: pyruvate kinase activity7.87E-03
80GO:0004805: trehalose-phosphatase activity8.77E-03
81GO:0003691: double-stranded telomeric DNA binding9.71E-03
82GO:0000976: transcription regulatory region sequence-specific DNA binding1.07E-02
83GO:0000049: tRNA binding1.07E-02
84GO:0008081: phosphoric diester hydrolase activity1.17E-02
85GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.17E-02
86GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.49E-02
87GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.49E-02
88GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.49E-02
89GO:0043130: ubiquitin binding1.60E-02
90GO:0005528: FK506 binding1.60E-02
91GO:0043424: protein histidine kinase binding1.72E-02
92GO:0005345: purine nucleobase transmembrane transporter activity1.72E-02
93GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.96E-02
94GO:0030570: pectate lyase activity2.09E-02
95GO:0008810: cellulase activity2.09E-02
96GO:0003727: single-stranded RNA binding2.22E-02
97GO:0004812: aminoacyl-tRNA ligase activity2.35E-02
98GO:0004527: exonuclease activity2.62E-02
99GO:0008536: Ran GTPase binding2.62E-02
100GO:0050662: coenzyme binding2.76E-02
101GO:0010181: FMN binding2.76E-02
102GO:0003924: GTPase activity2.85E-02
103GO:0016829: lyase activity2.86E-02
104GO:0019901: protein kinase binding2.90E-02
105GO:0016762: xyloglucan:xyloglucosyl transferase activity3.04E-02
106GO:0004672: protein kinase activity3.21E-02
107GO:0051015: actin filament binding3.33E-02
108GO:0003684: damaged DNA binding3.49E-02
109GO:0005525: GTP binding3.64E-02
110GO:0016597: amino acid binding3.79E-02
111GO:0016798: hydrolase activity, acting on glycosyl bonds4.44E-02
112GO:0008236: serine-type peptidase activity4.60E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.80E-12
2GO:0080085: signal recognition particle, chloroplast targeting4.22E-06
3GO:0009570: chloroplast stroma6.72E-05
4GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.80E-04
5GO:0009535: chloroplast thylakoid membrane4.14E-04
6GO:0016604: nuclear body5.40E-04
7GO:0009574: preprophase band9.40E-04
8GO:0016605: PML body1.08E-03
9GO:0032432: actin filament bundle1.55E-03
10GO:0046658: anchored component of plasma membrane2.30E-03
11GO:0009505: plant-type cell wall2.74E-03
12GO:0031225: anchored component of membrane3.23E-03
13GO:0030529: intracellular ribonucleoprotein complex5.13E-03
14GO:0000783: nuclear telomere cap complex6.18E-03
15GO:0005720: nuclear heterochromatin7.01E-03
16GO:0005884: actin filament9.71E-03
17GO:0031977: thylakoid lumen1.01E-02
18GO:0000311: plastid large ribosomal subunit1.07E-02
19GO:0005578: proteinaceous extracellular matrix1.17E-02
20GO:0030176: integral component of endoplasmic reticulum membrane1.38E-02
21GO:0042651: thylakoid membrane1.72E-02
22GO:0031969: chloroplast membrane1.75E-02
23GO:0009532: plastid stroma1.84E-02
24GO:0010287: plastoglobule2.51E-02
25GO:0005743: mitochondrial inner membrane2.60E-02
26GO:0005770: late endosome2.62E-02
27GO:0009543: chloroplast thylakoid lumen2.65E-02
28GO:0005623: cell2.72E-02
29GO:0009705: plant-type vacuole membrane3.65E-02
30GO:0000151: ubiquitin ligase complex4.77E-02
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Gene type



Gene DE type