GO Enrichment Analysis of Co-expressed Genes with
AT1G65980
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001881: receptor recycling | 0.00E+00 |
| 2 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 3 | GO:0006511: ubiquitin-dependent protein catabolic process | 5.63E-14 |
| 4 | GO:0080120: CAAX-box protein maturation | 5.48E-05 |
| 5 | GO:0071586: CAAX-box protein processing | 5.48E-05 |
| 6 | GO:0097502: mannosylation | 5.48E-05 |
| 7 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.19E-04 |
| 8 | GO:0000162: tryptophan biosynthetic process | 1.25E-04 |
| 9 | GO:0051252: regulation of RNA metabolic process | 1.34E-04 |
| 10 | GO:0006695: cholesterol biosynthetic process | 1.34E-04 |
| 11 | GO:0051788: response to misfolded protein | 1.34E-04 |
| 12 | GO:0010359: regulation of anion channel activity | 2.28E-04 |
| 13 | GO:0008333: endosome to lysosome transport | 2.28E-04 |
| 14 | GO:0009647: skotomorphogenesis | 3.33E-04 |
| 15 | GO:0001676: long-chain fatty acid metabolic process | 3.33E-04 |
| 16 | GO:0010483: pollen tube reception | 4.45E-04 |
| 17 | GO:0010363: regulation of plant-type hypersensitive response | 4.45E-04 |
| 18 | GO:0016579: protein deubiquitination | 4.90E-04 |
| 19 | GO:0046686: response to cadmium ion | 5.62E-04 |
| 20 | GO:0018279: protein N-linked glycosylation via asparagine | 5.66E-04 |
| 21 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 6.92E-04 |
| 22 | GO:0043248: proteasome assembly | 6.92E-04 |
| 23 | GO:0010189: vitamin E biosynthetic process | 8.25E-04 |
| 24 | GO:0009648: photoperiodism | 8.25E-04 |
| 25 | GO:0000054: ribosomal subunit export from nucleus | 8.25E-04 |
| 26 | GO:0048528: post-embryonic root development | 9.62E-04 |
| 27 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.11E-03 |
| 28 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.11E-03 |
| 29 | GO:0006526: arginine biosynthetic process | 1.26E-03 |
| 30 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 1.26E-03 |
| 31 | GO:0001510: RNA methylation | 1.26E-03 |
| 32 | GO:0006754: ATP biosynthetic process | 1.41E-03 |
| 33 | GO:0006820: anion transport | 2.11E-03 |
| 34 | GO:0007034: vacuolar transport | 2.49E-03 |
| 35 | GO:0006863: purine nucleobase transport | 2.90E-03 |
| 36 | GO:0034976: response to endoplasmic reticulum stress | 2.90E-03 |
| 37 | GO:0006487: protein N-linked glycosylation | 3.11E-03 |
| 38 | GO:0015992: proton transport | 3.54E-03 |
| 39 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.77E-03 |
| 40 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.83E-03 |
| 41 | GO:0009411: response to UV | 4.00E-03 |
| 42 | GO:0040007: growth | 4.00E-03 |
| 43 | GO:0042147: retrograde transport, endosome to Golgi | 4.47E-03 |
| 44 | GO:0006606: protein import into nucleus | 4.71E-03 |
| 45 | GO:0008360: regulation of cell shape | 4.96E-03 |
| 46 | GO:0048868: pollen tube development | 4.96E-03 |
| 47 | GO:0015986: ATP synthesis coupled proton transport | 5.22E-03 |
| 48 | GO:0048825: cotyledon development | 5.48E-03 |
| 49 | GO:0006623: protein targeting to vacuole | 5.48E-03 |
| 50 | GO:0000302: response to reactive oxygen species | 5.74E-03 |
| 51 | GO:0016132: brassinosteroid biosynthetic process | 5.74E-03 |
| 52 | GO:0010193: response to ozone | 5.74E-03 |
| 53 | GO:0048366: leaf development | 6.21E-03 |
| 54 | GO:0030163: protein catabolic process | 6.27E-03 |
| 55 | GO:0009567: double fertilization forming a zygote and endosperm | 6.55E-03 |
| 56 | GO:0016126: sterol biosynthetic process | 7.40E-03 |
| 57 | GO:0045454: cell redox homeostasis | 7.82E-03 |
| 58 | GO:0006950: response to stress | 8.29E-03 |
| 59 | GO:0006499: N-terminal protein myristoylation | 9.54E-03 |
| 60 | GO:0006811: ion transport | 9.54E-03 |
| 61 | GO:0010119: regulation of stomatal movement | 9.86E-03 |
| 62 | GO:0010043: response to zinc ion | 9.86E-03 |
| 63 | GO:0006099: tricarboxylic acid cycle | 1.09E-02 |
| 64 | GO:0006631: fatty acid metabolic process | 1.19E-02 |
| 65 | GO:0000209: protein polyubiquitination | 1.29E-02 |
| 66 | GO:0009736: cytokinin-activated signaling pathway | 1.55E-02 |
| 67 | GO:0006486: protein glycosylation | 1.55E-02 |
| 68 | GO:0009735: response to cytokinin | 1.57E-02 |
| 69 | GO:0035556: intracellular signal transduction | 1.81E-02 |
| 70 | GO:0009553: embryo sac development | 1.95E-02 |
| 71 | GO:0018105: peptidyl-serine phosphorylation | 2.04E-02 |
| 72 | GO:0006396: RNA processing | 2.04E-02 |
| 73 | GO:0006413: translational initiation | 2.80E-02 |
| 74 | GO:0040008: regulation of growth | 2.85E-02 |
| 75 | GO:0007166: cell surface receptor signaling pathway | 3.24E-02 |
| 76 | GO:0009617: response to bacterium | 3.34E-02 |
| 77 | GO:0009826: unidimensional cell growth | 3.91E-02 |
| 78 | GO:0009723: response to ethylene | 4.45E-02 |
| 79 | GO:0016192: vesicle-mediated transport | 4.85E-02 |
| 80 | GO:0046777: protein autophosphorylation | 4.90E-02 |
| 81 | GO:0044550: secondary metabolite biosynthetic process | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0047598: 7-dehydrocholesterol reductase activity | 0.00E+00 |
| 3 | GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 4 | GO:0000033: alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 5 | GO:0008418: protein-N-terminal asparagine amidohydrolase activity | 0.00E+00 |
| 6 | GO:0009918: sterol delta7 reductase activity | 0.00E+00 |
| 7 | GO:0004298: threonine-type endopeptidase activity | 1.18E-12 |
| 8 | GO:0008233: peptidase activity | 2.26E-07 |
| 9 | GO:0015157: oligosaccharide transmembrane transporter activity | 5.48E-05 |
| 10 | GO:0004048: anthranilate phosphoribosyltransferase activity | 5.48E-05 |
| 11 | GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity | 5.48E-05 |
| 12 | GO:0004175: endopeptidase activity | 9.76E-05 |
| 13 | GO:0008428: ribonuclease inhibitor activity | 1.34E-04 |
| 14 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 1.34E-04 |
| 15 | GO:0004640: phosphoribosylanthranilate isomerase activity | 1.34E-04 |
| 16 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.34E-04 |
| 17 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.34E-04 |
| 18 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 1.74E-04 |
| 19 | GO:0004848: ureidoglycolate hydrolase activity | 2.28E-04 |
| 20 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 3.33E-04 |
| 21 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 4.45E-04 |
| 22 | GO:0008948: oxaloacetate decarboxylase activity | 5.66E-04 |
| 23 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 5.66E-04 |
| 24 | GO:0036402: proteasome-activating ATPase activity | 6.92E-04 |
| 25 | GO:0004656: procollagen-proline 4-dioxygenase activity | 8.25E-04 |
| 26 | GO:0102391: decanoate--CoA ligase activity | 8.25E-04 |
| 27 | GO:0004467: long-chain fatty acid-CoA ligase activity | 9.62E-04 |
| 28 | GO:0015288: porin activity | 1.11E-03 |
| 29 | GO:0008173: RNA methyltransferase activity | 1.26E-03 |
| 30 | GO:0003843: 1,3-beta-D-glucan synthase activity | 1.26E-03 |
| 31 | GO:0008308: voltage-gated anion channel activity | 1.26E-03 |
| 32 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 1.75E-03 |
| 33 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.93E-03 |
| 34 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.30E-03 |
| 35 | GO:0017025: TBP-class protein binding | 2.70E-03 |
| 36 | GO:0031418: L-ascorbic acid binding | 3.11E-03 |
| 37 | GO:0005345: purine nucleobase transmembrane transporter activity | 3.32E-03 |
| 38 | GO:0003756: protein disulfide isomerase activity | 4.23E-03 |
| 39 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 4.96E-03 |
| 40 | GO:0003713: transcription coactivator activity | 4.96E-03 |
| 41 | GO:0016853: isomerase activity | 5.22E-03 |
| 42 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 5.74E-03 |
| 43 | GO:0004197: cysteine-type endopeptidase activity | 6.00E-03 |
| 44 | GO:0008237: metallopeptidase activity | 6.83E-03 |
| 45 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 7.99E-03 |
| 46 | GO:0004683: calmodulin-dependent protein kinase activity | 8.29E-03 |
| 47 | GO:0004222: metalloendopeptidase activity | 9.54E-03 |
| 48 | GO:0003924: GTPase activity | 9.65E-03 |
| 49 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.05E-02 |
| 50 | GO:0031625: ubiquitin protein ligase binding | 1.67E-02 |
| 51 | GO:0016787: hydrolase activity | 1.87E-02 |
| 52 | GO:0015035: protein disulfide oxidoreductase activity | 2.04E-02 |
| 53 | GO:0008026: ATP-dependent helicase activity | 2.08E-02 |
| 54 | GO:0005524: ATP binding | 2.37E-02 |
| 55 | GO:0005516: calmodulin binding | 2.59E-02 |
| 56 | GO:0008565: protein transporter activity | 2.66E-02 |
| 57 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.80E-02 |
| 58 | GO:0005525: GTP binding | 2.83E-02 |
| 59 | GO:0005509: calcium ion binding | 3.21E-02 |
| 60 | GO:0003743: translation initiation factor activity | 3.29E-02 |
| 61 | GO:0005506: iron ion binding | 3.43E-02 |
| 62 | GO:0000287: magnesium ion binding | 3.96E-02 |
| 63 | GO:0061630: ubiquitin protein ligase activity | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 2.95E-15 |
| 2 | GO:0005839: proteasome core complex | 1.18E-12 |
| 3 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.83E-07 |
| 4 | GO:0005773: vacuole | 6.29E-05 |
| 5 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.11E-04 |
| 6 | GO:0005838: proteasome regulatory particle | 2.28E-04 |
| 7 | GO:0046861: glyoxysomal membrane | 2.28E-04 |
| 8 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 4.45E-04 |
| 9 | GO:0030117: membrane coat | 4.45E-04 |
| 10 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 4.45E-04 |
| 11 | GO:0005774: vacuolar membrane | 5.47E-04 |
| 12 | GO:0008250: oligosaccharyltransferase complex | 5.66E-04 |
| 13 | GO:0005771: multivesicular body | 6.92E-04 |
| 14 | GO:0030904: retromer complex | 6.92E-04 |
| 15 | GO:0031597: cytosolic proteasome complex | 8.25E-04 |
| 16 | GO:0031595: nuclear proteasome complex | 9.62E-04 |
| 17 | GO:0046930: pore complex | 1.26E-03 |
| 18 | GO:0009514: glyoxysome | 1.26E-03 |
| 19 | GO:0000148: 1,3-beta-D-glucan synthase complex | 1.26E-03 |
| 20 | GO:0030665: clathrin-coated vesicle membrane | 1.58E-03 |
| 21 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.58E-03 |
| 22 | GO:0030125: clathrin vesicle coat | 1.75E-03 |
| 23 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.93E-03 |
| 24 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 2.70E-03 |
| 25 | GO:0005741: mitochondrial outer membrane | 3.54E-03 |
| 26 | GO:0009941: chloroplast envelope | 3.87E-03 |
| 27 | GO:0009504: cell plate | 5.48E-03 |
| 28 | GO:0005622: intracellular | 6.03E-03 |
| 29 | GO:0031969: chloroplast membrane | 6.54E-03 |
| 30 | GO:0005783: endoplasmic reticulum | 7.71E-03 |
| 31 | GO:0009536: plastid | 9.23E-03 |
| 32 | GO:0005829: cytosol | 1.01E-02 |
| 33 | GO:0031902: late endosome membrane | 1.19E-02 |
| 34 | GO:0005789: endoplasmic reticulum membrane | 1.22E-02 |
| 35 | GO:0005794: Golgi apparatus | 1.38E-02 |
| 36 | GO:0009507: chloroplast | 1.54E-02 |
| 37 | GO:0005635: nuclear envelope | 1.63E-02 |
| 38 | GO:0009706: chloroplast inner membrane | 1.99E-02 |
| 39 | GO:0005623: cell | 2.38E-02 |
| 40 | GO:0005737: cytoplasm | 3.60E-02 |
| 41 | GO:0016020: membrane | 4.54E-02 |