co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G65970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048034: heme O biosynthetic process	0.00E+00
2	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0000162: tryptophan biosynthetic process	6.18E-09
5	GO:0009851: auxin biosynthetic process	4.37E-06
6	GO:0010600: regulation of auxin biosynthetic process	2.20E-05
7	GO:0009407: toxin catabolic process	2.40E-05
8	GO:0046686: response to cadmium ion	3.27E-05
9	GO:0010150: leaf senescence	4.83E-05
10	GO:1900056: negative regulation of leaf senescence	9.92E-05
11	GO:0033306: phytol metabolic process	1.69E-04
12	GO:0042964: thioredoxin reduction	1.69E-04
13	GO:0006979: response to oxidative stress	2.48E-04
14	GO:0042744: hydrogen peroxide catabolic process	3.07E-04
15	GO:0052544: defense response by callose deposition in cell wall	3.19E-04
16	GO:0010311: lateral root formation	3.28E-04
17	GO:0019632: shikimate metabolic process	3.83E-04
18	GO:0015865: purine nucleotide transport	3.83E-04
19	GO:1902000: homogentisate catabolic process	3.83E-04
20	GO:0071497: cellular response to freezing	3.83E-04
21	GO:0055114: oxidation-reduction process	4.22E-04
22	GO:0009617: response to bacterium	5.48E-04
23	GO:0009072: aromatic amino acid family metabolic process	6.25E-04
24	GO:0052546: cell wall pectin metabolic process	6.25E-04
25	GO:0006591: ornithine metabolic process	6.25E-04
26	GO:0006556: S-adenosylmethionine biosynthetic process	6.25E-04
27	GO:0006065: UDP-glucuronate biosynthetic process	6.25E-04
28	GO:0010366: negative regulation of ethylene biosynthetic process	6.25E-04
29	GO:0010272: response to silver ion	6.25E-04
30	GO:0006874: cellular calcium ion homeostasis	7.14E-04
31	GO:0016998: cell wall macromolecule catabolic process	7.83E-04
32	GO:0046902: regulation of mitochondrial membrane permeability	8.93E-04
33	GO:0006012: galactose metabolic process	9.28E-04
34	GO:0009651: response to salt stress	1.17E-03
35	GO:0048830: adventitious root development	1.18E-03
36	GO:0033358: UDP-L-arabinose biosynthetic process	1.18E-03
37	GO:0010188: response to microbial phytotoxin	1.18E-03
38	GO:0006878: cellular copper ion homeostasis	1.18E-03
39	GO:0045227: capsule polysaccharide biosynthetic process	1.18E-03
40	GO:0006662: glycerol ether metabolic process	1.26E-03
41	GO:0045454: cell redox homeostasis	1.47E-03
42	GO:0046283: anthocyanin-containing compound metabolic process	1.50E-03
43	GO:0006564: L-serine biosynthetic process	1.50E-03
44	GO:0009228: thiamine biosynthetic process	1.85E-03
45	GO:0002238: response to molecule of fungal origin	1.85E-03
46	GO:0009759: indole glucosinolate biosynthetic process	1.85E-03
47	GO:0006561: proline biosynthetic process	1.85E-03
48	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.85E-03
49	GO:0009423: chorismate biosynthetic process	2.22E-03
50	GO:0045926: negative regulation of growth	2.22E-03
51	GO:0009082: branched-chain amino acid biosynthetic process	2.22E-03
52	GO:0009099: valine biosynthetic process	2.22E-03
53	GO:0080186: developmental vegetative growth	2.61E-03
54	GO:0071669: plant-type cell wall organization or biogenesis	2.61E-03
55	GO:0050829: defense response to Gram-negative bacterium	2.61E-03
56	GO:0043068: positive regulation of programmed cell death	3.02E-03
57	GO:0015996: chlorophyll catabolic process	3.46E-03
58	GO:0007186: G-protein coupled receptor signaling pathway	3.46E-03
59	GO:0010497: plasmodesmata-mediated intercellular transport	3.46E-03
60	GO:0019430: removal of superoxide radicals	3.46E-03
61	GO:0010120: camalexin biosynthetic process	3.46E-03
62	GO:0009097: isoleucine biosynthetic process	3.46E-03
63	GO:0034599: cellular response to oxidative stress	3.81E-03
64	GO:0046685: response to arsenic-containing substance	3.91E-03
65	GO:0019432: triglyceride biosynthetic process	3.91E-03
66	GO:0051865: protein autoubiquitination	3.91E-03
67	GO:0006783: heme biosynthetic process	3.91E-03
68	GO:0010112: regulation of systemic acquired resistance	3.91E-03
69	GO:0009098: leucine biosynthetic process	4.38E-03
70	GO:2000280: regulation of root development	4.38E-03
71	GO:0006032: chitin catabolic process	4.87E-03
72	GO:0009688: abscisic acid biosynthetic process	4.87E-03
73	GO:0009641: shade avoidance	4.87E-03
74	GO:0009636: response to toxic substance	5.27E-03
75	GO:0009682: induced systemic resistance	5.38E-03
76	GO:0009073: aromatic amino acid family biosynthetic process	5.38E-03
77	GO:0000272: polysaccharide catabolic process	5.38E-03
78	GO:0009684: indoleacetic acid biosynthetic process	5.38E-03
79	GO:0009723: response to ethylene	5.43E-03
80	GO:0012501: programmed cell death	5.91E-03
81	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	5.91E-03
82	GO:0006807: nitrogen compound metabolic process	6.46E-03
83	GO:2000028: regulation of photoperiodism, flowering	6.46E-03
84	GO:0009718: anthocyanin-containing compound biosynthetic process	6.46E-03
85	GO:0006541: glutamine metabolic process	7.02E-03
86	GO:0009225: nucleotide-sugar metabolic process	7.60E-03
87	GO:0006886: intracellular protein transport	7.76E-03
88	GO:0005975: carbohydrate metabolic process	7.91E-03
89	GO:0045333: cellular respiration	8.81E-03
90	GO:0005992: trehalose biosynthetic process	8.81E-03
91	GO:0043622: cortical microtubule organization	9.44E-03
92	GO:0051302: regulation of cell division	9.44E-03
93	GO:0048511: rhythmic process	1.01E-02
94	GO:0009753: response to jasmonic acid	1.06E-02
95	GO:0006730: one-carbon metabolic process	1.08E-02
96	GO:0071456: cellular response to hypoxia	1.08E-02
97	GO:0008152: metabolic process	1.10E-02
98	GO:0009693: ethylene biosynthetic process	1.14E-02
99	GO:0042147: retrograde transport, endosome to Golgi	1.28E-02
100	GO:0048544: recognition of pollen	1.51E-02
101	GO:0006814: sodium ion transport	1.51E-02
102	GO:0006623: protein targeting to vacuole	1.58E-02
103	GO:0010183: pollen tube guidance	1.58E-02
104	GO:0006891: intra-Golgi vesicle-mediated transport	1.66E-02
105	GO:0009630: gravitropism	1.74E-02
106	GO:0071281: cellular response to iron ion	1.82E-02
107	GO:1901657: glycosyl compound metabolic process	1.82E-02
108	GO:0019760: glucosinolate metabolic process	1.90E-02
109	GO:0015031: protein transport	2.01E-02
110	GO:0051607: defense response to virus	2.07E-02
111	GO:0009615: response to virus	2.16E-02
112	GO:0006974: cellular response to DNA damage stimulus	2.33E-02
113	GO:0009627: systemic acquired resistance	2.33E-02
114	GO:0006888: ER to Golgi vesicle-mediated transport	2.42E-02
115	GO:0050832: defense response to fungus	2.50E-02
116	GO:0016049: cell growth	2.51E-02
117	GO:0009817: defense response to fungus, incompatible interaction	2.61E-02
118	GO:0010043: response to zinc ion	2.89E-02
119	GO:0010200: response to chitin	3.10E-02
120	GO:0006839: mitochondrial transport	3.38E-02
121	GO:0006897: endocytosis	3.49E-02
122	GO:0042542: response to hydrogen peroxide	3.59E-02
123	GO:0010114: response to red light	3.69E-02
124	GO:0051707: response to other organism	3.69E-02
125	GO:0007275: multicellular organism development	3.81E-02
126	GO:0009965: leaf morphogenesis	4.01E-02
127	GO:0009737: response to abscisic acid	4.28E-02
128	GO:0006812: cation transport	4.34E-02
129	GO:0009664: plant-type cell wall organization	4.34E-02
130	GO:0009846: pollen germination	4.34E-02
131	GO:0042538: hyperosmotic salinity response	4.34E-02
132	GO:0009751: response to salicylic acid	4.35E-02
133	GO:0006813: potassium ion transport	4.57E-02
134	GO:0009736: cytokinin-activated signaling pathway	4.57E-02
135	GO:0042742: defense response to bacterium	4.83E-02
136	GO:0009909: regulation of flower development	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0004764: shikimate 3-dehydrogenase (NADP+) activity	0.00E+00
3	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
4	GO:0003855: 3-dehydroquinate dehydratase activity	0.00E+00
5	GO:0008495: protoheme IX farnesyltransferase activity	0.00E+00
6	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
7	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
8	GO:0019172: glyoxalase III activity	1.38E-06
9	GO:0004049: anthranilate synthase activity	5.12E-06
10	GO:0004601: peroxidase activity	1.22E-05
11	GO:0004364: glutathione transferase activity	4.81E-05
12	GO:0004791: thioredoxin-disulfide reductase activity	1.03E-04
13	GO:0000824: inositol tetrakisphosphate 3-kinase activity	1.69E-04
14	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.69E-04
15	GO:0051669: fructan beta-fructosidase activity	1.69E-04
16	GO:0047326: inositol tetrakisphosphate 5-kinase activity	1.69E-04
17	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	1.69E-04
18	GO:0031219: levanase activity	1.69E-04
19	GO:2001147: camalexin binding	1.69E-04
20	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	1.69E-04
21	GO:0004649: poly(ADP-ribose) glycohydrolase activity	1.69E-04
22	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.69E-04
23	GO:2001227: quercitrin binding	1.69E-04
24	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.69E-04
25	GO:0015035: protein disulfide oxidoreductase activity	1.78E-04
26	GO:0005217: intracellular ligand-gated ion channel activity	5.27E-04
27	GO:0004970: ionotropic glutamate receptor activity	5.27E-04
28	GO:0003979: UDP-glucose 6-dehydrogenase activity	6.25E-04
29	GO:0004478: methionine adenosyltransferase activity	6.25E-04
30	GO:0005432: calcium:sodium antiporter activity	8.93E-04
31	GO:0010178: IAA-amino acid conjugate hydrolase activity	8.93E-04
32	GO:0052656: L-isoleucine transaminase activity	8.93E-04
33	GO:0052654: L-leucine transaminase activity	8.93E-04
34	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	8.93E-04
35	GO:0052655: L-valine transaminase activity	8.93E-04
36	GO:0047134: protein-disulfide reductase activity	1.09E-03
37	GO:0004084: branched-chain-amino-acid transaminase activity	1.18E-03
38	GO:0004930: G-protein coupled receptor activity	1.18E-03
39	GO:0004031: aldehyde oxidase activity	1.18E-03
40	GO:0050302: indole-3-acetaldehyde oxidase activity	1.18E-03
41	GO:0004659: prenyltransferase activity	1.18E-03
42	GO:0050373: UDP-arabinose 4-epimerase activity	1.18E-03
43	GO:0004834: tryptophan synthase activity	1.18E-03
44	GO:0003824: catalytic activity	1.20E-03
45	GO:0030276: clathrin binding	1.26E-03
46	GO:0005471: ATP:ADP antiporter activity	1.50E-03
47	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.75E-03
48	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.85E-03
49	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.85E-03
50	GO:0008200: ion channel inhibitor activity	1.85E-03
51	GO:0003978: UDP-glucose 4-epimerase activity	2.22E-03
52	GO:0004602: glutathione peroxidase activity	2.22E-03
53	GO:0004144: diacylglycerol O-acyltransferase activity	2.22E-03
54	GO:0020037: heme binding	2.46E-03
55	GO:0043295: glutathione binding	2.61E-03
56	GO:0004034: aldose 1-epimerase activity	3.02E-03
57	GO:0004311: farnesyltranstransferase activity	3.02E-03
58	GO:0015491: cation:cation antiporter activity	3.02E-03
59	GO:0050661: NADP binding	4.15E-03
60	GO:0004568: chitinase activity	4.87E-03
61	GO:0008794: arsenate reductase (glutaredoxin) activity	5.38E-03
62	GO:0005543: phospholipid binding	5.38E-03
63	GO:0031072: heat shock protein binding	6.46E-03
64	GO:0030246: carbohydrate binding	7.57E-03
65	GO:0008061: chitin binding	7.60E-03
66	GO:0004867: serine-type endopeptidase inhibitor activity	7.60E-03
67	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.21E-02
68	GO:0008565: protein transporter activity	1.35E-02
69	GO:0008080: N-acetyltransferase activity	1.43E-02
70	GO:0005199: structural constituent of cell wall	1.43E-02
71	GO:0016853: isomerase activity	1.51E-02
72	GO:0004518: nuclease activity	1.74E-02
73	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.99E-02
74	GO:0008237: metallopeptidase activity	1.99E-02
75	GO:0102483: scopolin beta-glucosidase activity	2.42E-02
76	GO:0004683: calmodulin-dependent protein kinase activity	2.42E-02
77	GO:0004222: metalloendopeptidase activity	2.79E-02
78	GO:0050660: flavin adenine dinucleotide binding	2.80E-02
79	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.89E-02
80	GO:0030145: manganese ion binding	2.89E-02
81	GO:0008422: beta-glucosidase activity	3.28E-02
82	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.28E-02
83	GO:0052689: carboxylic ester hydrolase activity	3.31E-02
84	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.87E-02
85	GO:0051537: 2 iron, 2 sulfur cluster binding	3.91E-02
86	GO:0005198: structural molecule activity	4.01E-02
87	GO:0051287: NAD binding	4.23E-02
88	GO:0005509: calcium ion binding	4.37E-02
89	GO:0003924: GTPase activity	4.41E-02
90	GO:0009055: electron carrier activity	4.73E-02
91	GO:0005506: iron ion binding	4.73E-02
92	GO:0045330: aspartyl esterase activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0030121: AP-1 adaptor complex	0.00E+00
2	GO:0005950: anthranilate synthase complex	1.38E-06
3	GO:0009530: primary cell wall	6.25E-04
4	GO:0030131: clathrin adaptor complex	3.02E-03
5	GO:0005886: plasma membrane	3.88E-03
6	GO:0017119: Golgi transport complex	4.87E-03
7	GO:0031012: extracellular matrix	6.46E-03
8	GO:0005829: cytosol	9.75E-03
9	GO:0005905: clathrin-coated pit	1.01E-02
10	GO:0005794: Golgi apparatus	1.16E-02
11	GO:0030136: clathrin-coated vesicle	1.28E-02
12	GO:0005618: cell wall	1.49E-02
13	GO:0009570: chloroplast stroma	1.52E-02
14	GO:0031965: nuclear membrane	1.58E-02
15	GO:0071944: cell periphery	1.82E-02
16	GO:0032580: Golgi cisterna membrane	1.90E-02
17	GO:0009505: plant-type cell wall	1.97E-02
18	GO:0005788: endoplasmic reticulum lumen	2.24E-02
19	GO:0048046: apoplast	3.50E-02
20	GO:0031225: anchored component of membrane	3.51E-02
21	GO:0090406: pollen tube	3.69E-02
22	GO:0005743: mitochondrial inner membrane	4.11E-02