Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G65690

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
2GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
3GO:0015690: aluminum cation transport0.00E+00
4GO:0009312: oligosaccharide biosynthetic process0.00E+00
5GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
6GO:0046865: terpenoid transport0.00E+00
7GO:0018063: cytochrome c-heme linkage0.00E+00
8GO:0051553: flavone biosynthetic process0.00E+00
9GO:0010324: membrane invagination0.00E+00
10GO:0010055: atrichoblast differentiation0.00E+00
11GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
12GO:1902001: fatty acid transmembrane transport0.00E+00
13GO:0010112: regulation of systemic acquired resistance1.80E-08
14GO:0051707: response to other organism3.55E-08
15GO:0009751: response to salicylic acid3.12E-06
16GO:0009620: response to fungus4.93E-06
17GO:0042742: defense response to bacterium5.20E-06
18GO:0009617: response to bacterium7.84E-06
19GO:0006979: response to oxidative stress2.75E-05
20GO:0009753: response to jasmonic acid3.06E-05
21GO:0071456: cellular response to hypoxia3.74E-05
22GO:0009611: response to wounding3.83E-05
23GO:0006952: defense response4.97E-05
24GO:0009643: photosynthetic acclimation3.08E-04
25GO:0009759: indole glucosinolate biosynthetic process3.08E-04
26GO:0009609: response to symbiotic bacterium5.09E-04
27GO:0033306: phytol metabolic process5.09E-04
28GO:0009700: indole phytoalexin biosynthetic process5.09E-04
29GO:0050691: regulation of defense response to virus by host5.09E-04
30GO:0032491: detection of molecule of fungal origin5.09E-04
31GO:0034214: protein hexamerization5.09E-04
32GO:1990542: mitochondrial transmembrane transport5.09E-04
33GO:0032107: regulation of response to nutrient levels5.09E-04
34GO:0048508: embryonic meristem development5.09E-04
35GO:0015760: glucose-6-phosphate transport5.09E-04
36GO:0042391: regulation of membrane potential7.33E-04
37GO:0010120: camalexin biosynthetic process8.02E-04
38GO:0010204: defense response signaling pathway, resistance gene-independent8.02E-04
39GO:0080167: response to karrikin9.23E-04
40GO:0009835: fruit ripening9.59E-04
41GO:0031347: regulation of defense response1.05E-03
42GO:0010193: response to ozone1.05E-03
43GO:0015908: fatty acid transport1.10E-03
44GO:0002240: response to molecule of oomycetes origin1.10E-03
45GO:0044419: interspecies interaction between organisms1.10E-03
46GO:0009945: radial axis specification1.10E-03
47GO:0019725: cellular homeostasis1.10E-03
48GO:0015712: hexose phosphate transport1.10E-03
49GO:0015012: heparan sulfate proteoglycan biosynthetic process1.10E-03
50GO:0051258: protein polymerization1.10E-03
51GO:0071668: plant-type cell wall assembly1.10E-03
52GO:0009446: putrescine biosynthetic process1.10E-03
53GO:0015914: phospholipid transport1.10E-03
54GO:0010155: regulation of proton transport1.10E-03
55GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.10E-03
56GO:0009838: abscission1.10E-03
57GO:0006527: arginine catabolic process1.10E-03
58GO:0080181: lateral root branching1.10E-03
59GO:0006024: glycosaminoglycan biosynthetic process1.10E-03
60GO:0055088: lipid homeostasis1.10E-03
61GO:0010150: leaf senescence1.12E-03
62GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.13E-03
63GO:0009737: response to abscisic acid1.25E-03
64GO:0050832: defense response to fungus1.37E-03
65GO:0007166: cell surface receptor signaling pathway1.42E-03
66GO:1903507: negative regulation of nucleic acid-templated transcription1.52E-03
67GO:0009684: indoleacetic acid biosynthetic process1.52E-03
68GO:0051607: defense response to virus1.56E-03
69GO:0015695: organic cation transport1.79E-03
70GO:0015714: phosphoenolpyruvate transport1.79E-03
71GO:0080168: abscisic acid transport1.79E-03
72GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.79E-03
73GO:0006954: inflammatory response1.79E-03
74GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.79E-03
75GO:0035436: triose phosphate transmembrane transport1.79E-03
76GO:0080163: regulation of protein serine/threonine phosphatase activity1.79E-03
77GO:0071398: cellular response to fatty acid1.79E-03
78GO:0010186: positive regulation of cellular defense response1.79E-03
79GO:0015783: GDP-fucose transport1.79E-03
80GO:0010476: gibberellin mediated signaling pathway1.79E-03
81GO:0010325: raffinose family oligosaccharide biosynthetic process1.79E-03
82GO:0015692: lead ion transport1.79E-03
83GO:0002237: response to molecule of bacterial origin2.24E-03
84GO:0043207: response to external biotic stimulus2.60E-03
85GO:0010731: protein glutathionylation2.60E-03
86GO:0015696: ammonium transport2.60E-03
87GO:0071323: cellular response to chitin2.60E-03
88GO:0051289: protein homotetramerization2.60E-03
89GO:0080024: indolebutyric acid metabolic process2.60E-03
90GO:0001676: long-chain fatty acid metabolic process2.60E-03
91GO:0070301: cellular response to hydrogen peroxide2.60E-03
92GO:0002239: response to oomycetes2.60E-03
93GO:0000162: tryptophan biosynthetic process2.80E-03
94GO:0006468: protein phosphorylation2.84E-03
95GO:0080147: root hair cell development3.10E-03
96GO:0009723: response to ethylene3.14E-03
97GO:0048830: adventitious root development3.50E-03
98GO:1901002: positive regulation of response to salt stress3.50E-03
99GO:0072488: ammonium transmembrane transport3.50E-03
100GO:0015713: phosphoglycerate transport3.50E-03
101GO:0008295: spermidine biosynthetic process3.50E-03
102GO:0015867: ATP transport3.50E-03
103GO:1901141: regulation of lignin biosynthetic process3.50E-03
104GO:0010109: regulation of photosynthesis3.50E-03
105GO:0060548: negative regulation of cell death3.50E-03
106GO:0009939: positive regulation of gibberellic acid mediated signaling pathway3.50E-03
107GO:0010200: response to chitin3.76E-03
108GO:2000022: regulation of jasmonic acid mediated signaling pathway4.13E-03
109GO:0034052: positive regulation of plant-type hypersensitive response4.49E-03
110GO:0009229: thiamine diphosphate biosynthetic process4.49E-03
111GO:0009693: ethylene biosynthetic process4.51E-03
112GO:0006012: galactose metabolic process4.51E-03
113GO:0040008: regulation of growth4.55E-03
114GO:0009636: response to toxic substance5.12E-03
115GO:0033365: protein localization to organelle5.56E-03
116GO:0006596: polyamine biosynthetic process5.56E-03
117GO:0006574: valine catabolic process5.56E-03
118GO:0009228: thiamine biosynthetic process5.56E-03
119GO:0002238: response to molecule of fungal origin5.56E-03
120GO:0015866: ADP transport5.56E-03
121GO:0010256: endomembrane system organization5.56E-03
122GO:0042372: phylloquinone biosynthetic process6.71E-03
123GO:0045926: negative regulation of growth6.71E-03
124GO:0009942: longitudinal axis specification6.71E-03
125GO:0048444: floral organ morphogenesis6.71E-03
126GO:0002229: defense response to oomycetes7.67E-03
127GO:0006635: fatty acid beta-oxidation7.67E-03
128GO:1900056: negative regulation of leaf senescence7.95E-03
129GO:1900057: positive regulation of leaf senescence7.95E-03
130GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.95E-03
131GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.95E-03
132GO:0009610: response to symbiotic fungus7.95E-03
133GO:0043090: amino acid import7.95E-03
134GO:0071446: cellular response to salicylic acid stimulus7.95E-03
135GO:0008152: metabolic process8.34E-03
136GO:0009626: plant-type hypersensitive response8.69E-03
137GO:0030091: protein repair9.25E-03
138GO:0009787: regulation of abscisic acid-activated signaling pathway9.25E-03
139GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline9.25E-03
140GO:0009819: drought recovery9.25E-03
141GO:0009850: auxin metabolic process9.25E-03
142GO:0043068: positive regulation of programmed cell death9.25E-03
143GO:0006605: protein targeting9.25E-03
144GO:0031540: regulation of anthocyanin biosynthetic process9.25E-03
145GO:0006997: nucleus organization1.06E-02
146GO:0017004: cytochrome complex assembly1.06E-02
147GO:2000031: regulation of salicylic acid mediated signaling pathway1.06E-02
148GO:0010208: pollen wall assembly1.06E-02
149GO:0010029: regulation of seed germination1.18E-02
150GO:0006098: pentose-phosphate shunt1.21E-02
151GO:0019432: triglyceride biosynthetic process1.21E-02
152GO:0009056: catabolic process1.21E-02
153GO:0015780: nucleotide-sugar transport1.21E-02
154GO:0007338: single fertilization1.21E-02
155GO:0090332: stomatal closure1.36E-02
156GO:0048268: clathrin coat assembly1.36E-02
157GO:0008202: steroid metabolic process1.36E-02
158GO:0009638: phototropism1.36E-02
159GO:0051555: flavonol biosynthetic process1.52E-02
160GO:0009870: defense response signaling pathway, resistance gene-dependent1.52E-02
161GO:0019538: protein metabolic process1.52E-02
162GO:0006032: chitin catabolic process1.52E-02
163GO:0009641: shade avoidance1.52E-02
164GO:0010629: negative regulation of gene expression1.52E-02
165GO:0009813: flavonoid biosynthetic process1.53E-02
166GO:0010311: lateral root formation1.53E-02
167GO:0009407: toxin catabolic process1.61E-02
168GO:0019684: photosynthesis, light reaction1.68E-02
169GO:0009089: lysine biosynthetic process via diaminopimelate1.68E-02
170GO:0009682: induced systemic resistance1.68E-02
171GO:0052544: defense response by callose deposition in cell wall1.68E-02
172GO:0048527: lateral root development1.69E-02
173GO:0010119: regulation of stomatal movement1.69E-02
174GO:0009867: jasmonic acid mediated signaling pathway1.85E-02
175GO:0002213: defense response to insect1.85E-02
176GO:0045037: protein import into chloroplast stroma1.85E-02
177GO:0000266: mitochondrial fission1.85E-02
178GO:0055114: oxidation-reduction process1.96E-02
179GO:0010102: lateral root morphogenesis2.03E-02
180GO:0009785: blue light signaling pathway2.03E-02
181GO:0006810: transport2.04E-02
182GO:0006839: mitochondrial transport2.11E-02
183GO:0006887: exocytosis2.20E-02
184GO:0006897: endocytosis2.20E-02
185GO:0009739: response to gibberellin2.35E-02
186GO:0009408: response to heat2.36E-02
187GO:0046688: response to copper ion2.40E-02
188GO:0090351: seedling development2.40E-02
189GO:0006470: protein dephosphorylation2.41E-02
190GO:0009863: salicylic acid mediated signaling pathway2.79E-02
191GO:0006855: drug transmembrane transport2.79E-02
192GO:2000377: regulation of reactive oxygen species metabolic process2.79E-02
193GO:0009695: jasmonic acid biosynthetic process2.99E-02
194GO:0006825: copper ion transport2.99E-02
195GO:0051302: regulation of cell division2.99E-02
196GO:0009269: response to desiccation3.20E-02
197GO:0016998: cell wall macromolecule catabolic process3.20E-02
198GO:0006486: protein glycosylation3.23E-02
199GO:0016226: iron-sulfur cluster assembly3.42E-02
200GO:0009625: response to insect3.64E-02
201GO:0007275: multicellular organism development3.70E-02
202GO:0015031: protein transport3.78E-02
203GO:0070417: cellular response to cold4.08E-02
204GO:0000271: polysaccharide biosynthetic process4.32E-02
205GO:0000413: protein peptidyl-prolyl isomerization4.32E-02
206GO:0006520: cellular amino acid metabolic process4.55E-02
207GO:0045489: pectin biosynthetic process4.55E-02
208GO:0009624: response to nematode4.57E-02
209GO:0048544: recognition of pollen4.79E-02
210GO:0009646: response to absence of light4.79E-02
RankGO TermAdjusted P value
1GO:0050334: thiaminase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0005212: structural constituent of eye lens0.00E+00
4GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
5GO:0033759: flavone synthase activity0.00E+00
6GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
7GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
8GO:0030552: cAMP binding2.45E-04
9GO:0030553: cGMP binding2.45E-04
10GO:0005216: ion channel activity3.75E-04
11GO:2001147: camalexin binding5.09E-04
12GO:0008792: arginine decarboxylase activity5.09E-04
13GO:0015245: fatty acid transporter activity5.09E-04
14GO:0010285: L,L-diaminopimelate aminotransferase activity5.09E-04
15GO:2001227: quercitrin binding5.09E-04
16GO:0016758: transferase activity, transferring hexosyl groups6.06E-04
17GO:0047893: flavonol 3-O-glucosyltransferase activity6.59E-04
18GO:0030551: cyclic nucleotide binding7.33E-04
19GO:0005249: voltage-gated potassium channel activity7.33E-04
20GO:0016757: transferase activity, transferring glycosyl groups8.74E-04
21GO:0015152: glucose-6-phosphate transmembrane transporter activity1.10E-03
22GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.10E-03
23GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.10E-03
24GO:0032934: sterol binding1.10E-03
25GO:0015036: disulfide oxidoreductase activity1.10E-03
26GO:0050736: O-malonyltransferase activity1.10E-03
27GO:0048531: beta-1,3-galactosyltransferase activity1.10E-03
28GO:0010331: gibberellin binding1.10E-03
29GO:0047364: desulfoglucosinolate sulfotransferase activity1.10E-03
30GO:0008194: UDP-glycosyltransferase activity1.36E-03
31GO:0016301: kinase activity1.68E-03
32GO:0016531: copper chaperone activity1.79E-03
33GO:0032403: protein complex binding1.79E-03
34GO:0071917: triose-phosphate transmembrane transporter activity1.79E-03
35GO:0005457: GDP-fucose transmembrane transporter activity1.79E-03
36GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.79E-03
37GO:0004324: ferredoxin-NADP+ reductase activity1.79E-03
38GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.79E-03
39GO:0080043: quercetin 3-O-glucosyltransferase activity1.84E-03
40GO:0080044: quercetin 7-O-glucosyltransferase activity1.84E-03
41GO:0030247: polysaccharide binding2.06E-03
42GO:0035529: NADH pyrophosphatase activity2.60E-03
43GO:0010178: IAA-amino acid conjugate hydrolase activity2.60E-03
44GO:0017077: oxidative phosphorylation uncoupler activity2.60E-03
45GO:0005509: calcium ion binding2.70E-03
46GO:0001046: core promoter sequence-specific DNA binding3.10E-03
47GO:0003714: transcription corepressor activity3.10E-03
48GO:0031418: L-ascorbic acid binding3.10E-03
49GO:0003995: acyl-CoA dehydrogenase activity3.50E-03
50GO:0009916: alternative oxidase activity3.50E-03
51GO:0015120: phosphoglycerate transmembrane transporter activity3.50E-03
52GO:0004834: tryptophan synthase activity3.50E-03
53GO:0035251: UDP-glucosyltransferase activity3.77E-03
54GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.39E-03
55GO:0018685: alkane 1-monooxygenase activity4.49E-03
56GO:0003997: acyl-CoA oxidase activity4.49E-03
57GO:0005496: steroid binding4.49E-03
58GO:0047631: ADP-ribose diphosphatase activity4.49E-03
59GO:0015297: antiporter activity4.55E-03
60GO:0004499: N,N-dimethylaniline monooxygenase activity4.90E-03
61GO:0042803: protein homodimerization activity5.28E-03
62GO:0000210: NAD+ diphosphatase activity5.56E-03
63GO:0008519: ammonium transmembrane transporter activity5.56E-03
64GO:0004674: protein serine/threonine kinase activity6.48E-03
65GO:0033743: peptide-methionine (R)-S-oxide reductase activity6.71E-03
66GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.71E-03
67GO:0102391: decanoate--CoA ligase activity6.71E-03
68GO:0004144: diacylglycerol O-acyltransferase activity6.71E-03
69GO:0005347: ATP transmembrane transporter activity6.71E-03
70GO:0005261: cation channel activity6.71E-03
71GO:0004656: procollagen-proline 4-dioxygenase activity6.71E-03
72GO:0003978: UDP-glucose 4-epimerase activity6.71E-03
73GO:0008113: peptide-methionine (S)-S-oxide reductase activity6.71E-03
74GO:0015217: ADP transmembrane transporter activity6.71E-03
75GO:0043565: sequence-specific DNA binding7.25E-03
76GO:0043295: glutathione binding7.95E-03
77GO:0004467: long-chain fatty acid-CoA ligase activity7.95E-03
78GO:0102425: myricetin 3-O-glucosyltransferase activity7.95E-03
79GO:0102360: daphnetin 3-O-glucosyltransferase activity7.95E-03
80GO:0004034: aldose 1-epimerase activity9.25E-03
81GO:0005544: calcium-dependent phospholipid binding9.25E-03
82GO:0004033: aldo-keto reductase (NADP) activity9.25E-03
83GO:0004714: transmembrane receptor protein tyrosine kinase activity9.25E-03
84GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity9.25E-03
85GO:0008483: transaminase activity9.91E-03
86GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.91E-03
87GO:0008142: oxysterol binding1.06E-02
88GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.21E-02
89GO:0008375: acetylglucosaminyltransferase activity1.25E-02
90GO:0004721: phosphoprotein phosphatase activity1.31E-02
91GO:0047617: acyl-CoA hydrolase activity1.36E-02
92GO:0005516: calmodulin binding1.38E-02
93GO:0015020: glucuronosyltransferase activity1.52E-02
94GO:0004864: protein phosphatase inhibitor activity1.52E-02
95GO:0004568: chitinase activity1.52E-02
96GO:0005545: 1-phosphatidylinositol binding1.52E-02
97GO:0030170: pyridoxal phosphate binding1.55E-02
98GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.85E-02
99GO:0004722: protein serine/threonine phosphatase activity1.98E-02
100GO:0005315: inorganic phosphate transmembrane transporter activity2.03E-02
101GO:0050661: NADP binding2.11E-02
102GO:0004364: glutathione transferase activity2.30E-02
103GO:0008061: chitin binding2.40E-02
104GO:0003712: transcription cofactor activity2.40E-02
105GO:0008146: sulfotransferase activity2.40E-02
106GO:0016740: transferase activity2.66E-02
107GO:0005198: structural molecule activity2.69E-02
108GO:0051536: iron-sulfur cluster binding2.79E-02
109GO:0051287: NAD binding2.90E-02
110GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.42E-02
111GO:0008810: cellulase activity3.64E-02
112GO:0043531: ADP binding3.94E-02
113GO:0050660: flavin adenine dinucleotide binding4.21E-02
114GO:0005524: ATP binding4.25E-02
115GO:0030276: clathrin binding4.55E-02
116GO:0004497: monooxygenase activity4.58E-02
117GO:0016853: isomerase activity4.79E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane6.29E-10
2GO:0005794: Golgi apparatus6.06E-07
3GO:0005886: plasma membrane1.66E-06
4GO:0005901: caveola1.10E-03
5GO:0031314: extrinsic component of mitochondrial inner membrane1.10E-03
6GO:0005789: endoplasmic reticulum membrane1.27E-03
7GO:0017119: Golgi transport complex1.32E-03
8GO:0005743: mitochondrial inner membrane1.73E-03
9GO:0008287: protein serine/threonine phosphatase complex1.79E-03
10GO:0030658: transport vesicle membrane2.60E-03
11GO:0070062: extracellular exosome2.60E-03
12GO:0005783: endoplasmic reticulum4.24E-03
13GO:0000813: ESCRT I complex4.49E-03
14GO:0000164: protein phosphatase type 1 complex4.49E-03
15GO:0005802: trans-Golgi network5.49E-03
16GO:0031965: nuclear membrane7.16E-03
17GO:0005768: endosome7.24E-03
18GO:0046658: anchored component of plasma membrane7.49E-03
19GO:0005777: peroxisome8.16E-03
20GO:0043231: intracellular membrane-bounded organelle8.34E-03
21GO:0005779: integral component of peroxisomal membrane1.06E-02
22GO:0005887: integral component of plasma membrane1.20E-02
23GO:0000139: Golgi membrane1.73E-02
24GO:0005795: Golgi stack2.40E-02
25GO:0005758: mitochondrial intermembrane space2.79E-02
26GO:0070469: respiratory chain2.99E-02
27GO:0005741: mitochondrial outer membrane3.20E-02
28GO:0005905: clathrin-coated pit3.20E-02
29GO:0009506: plasmodesma3.26E-02
30GO:0031225: anchored component of membrane3.99E-02
31GO:0030136: clathrin-coated vesicle4.08E-02
32GO:0009706: chloroplast inner membrane4.57E-02
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Gene type



Gene DE type