GO Enrichment Analysis of Co-expressed Genes with
AT1G65295
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010203: response to very low fluence red light stimulus | 0.00E+00 |
| 2 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 3 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 4 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 5 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 6 | GO:0000373: Group II intron splicing | 5.84E-05 |
| 7 | GO:1902025: nitrate import | 7.58E-05 |
| 8 | GO:0000012: single strand break repair | 7.58E-05 |
| 9 | GO:0010201: response to continuous far red light stimulus by the high-irradiance response system | 7.58E-05 |
| 10 | GO:0090548: response to nitrate starvation | 7.58E-05 |
| 11 | GO:0000066: mitochondrial ornithine transport | 7.58E-05 |
| 12 | GO:1900871: chloroplast mRNA modification | 1.81E-04 |
| 13 | GO:0017006: protein-tetrapyrrole linkage | 3.05E-04 |
| 14 | GO:0031022: nuclear migration along microfilament | 3.05E-04 |
| 15 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.81E-04 |
| 16 | GO:2001141: regulation of RNA biosynthetic process | 4.41E-04 |
| 17 | GO:0009584: detection of visible light | 4.41E-04 |
| 18 | GO:0045489: pectin biosynthetic process | 4.44E-04 |
| 19 | GO:0046323: glucose import | 4.44E-04 |
| 20 | GO:0007264: small GTPase mediated signal transduction | 5.81E-04 |
| 21 | GO:0008295: spermidine biosynthetic process | 5.87E-04 |
| 22 | GO:0048442: sepal development | 5.87E-04 |
| 23 | GO:0051322: anaphase | 5.87E-04 |
| 24 | GO:0006661: phosphatidylinositol biosynthetic process | 5.87E-04 |
| 25 | GO:0009904: chloroplast accumulation movement | 7.44E-04 |
| 26 | GO:0016123: xanthophyll biosynthetic process | 7.44E-04 |
| 27 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.07E-04 |
| 28 | GO:0016311: dephosphorylation | 9.54E-04 |
| 29 | GO:0010076: maintenance of floral meristem identity | 1.08E-03 |
| 30 | GO:0017148: negative regulation of translation | 1.08E-03 |
| 31 | GO:0009903: chloroplast avoidance movement | 1.08E-03 |
| 32 | GO:0010161: red light signaling pathway | 1.26E-03 |
| 33 | GO:0048564: photosystem I assembly | 1.46E-03 |
| 34 | GO:0071482: cellular response to light stimulus | 1.66E-03 |
| 35 | GO:0009827: plant-type cell wall modification | 1.66E-03 |
| 36 | GO:0010206: photosystem II repair | 1.87E-03 |
| 37 | GO:0046685: response to arsenic-containing substance | 1.87E-03 |
| 38 | GO:0008202: steroid metabolic process | 2.09E-03 |
| 39 | GO:0009638: phototropism | 2.09E-03 |
| 40 | GO:0048441: petal development | 2.32E-03 |
| 41 | GO:0006352: DNA-templated transcription, initiation | 2.56E-03 |
| 42 | GO:0010207: photosystem II assembly | 3.32E-03 |
| 43 | GO:0006302: double-strand break repair | 3.32E-03 |
| 44 | GO:0048440: carpel development | 3.32E-03 |
| 45 | GO:0030150: protein import into mitochondrial matrix | 4.15E-03 |
| 46 | GO:0006289: nucleotide-excision repair | 4.15E-03 |
| 47 | GO:0008299: isoprenoid biosynthetic process | 4.43E-03 |
| 48 | GO:0015992: proton transport | 4.73E-03 |
| 49 | GO:0009738: abscisic acid-activated signaling pathway | 4.80E-03 |
| 50 | GO:0035428: hexose transmembrane transport | 5.03E-03 |
| 51 | GO:0031348: negative regulation of defense response | 5.03E-03 |
| 52 | GO:0048443: stamen development | 5.66E-03 |
| 53 | GO:0007166: cell surface receptor signaling pathway | 5.96E-03 |
| 54 | GO:0016117: carotenoid biosynthetic process | 5.98E-03 |
| 55 | GO:0010268: brassinosteroid homeostasis | 6.64E-03 |
| 56 | GO:0007018: microtubule-based movement | 6.99E-03 |
| 57 | GO:0008654: phospholipid biosynthetic process | 7.34E-03 |
| 58 | GO:0016132: brassinosteroid biosynthetic process | 7.69E-03 |
| 59 | GO:0009630: gravitropism | 8.05E-03 |
| 60 | GO:0016125: sterol metabolic process | 8.79E-03 |
| 61 | GO:0009793: embryo development ending in seed dormancy | 9.42E-03 |
| 62 | GO:0000910: cytokinesis | 9.56E-03 |
| 63 | GO:0016126: sterol biosynthetic process | 9.95E-03 |
| 64 | GO:0010029: regulation of seed germination | 1.03E-02 |
| 65 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.03E-02 |
| 66 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.03E-02 |
| 67 | GO:0030244: cellulose biosynthetic process | 1.20E-02 |
| 68 | GO:0018298: protein-chromophore linkage | 1.20E-02 |
| 69 | GO:0010218: response to far red light | 1.28E-02 |
| 70 | GO:0009834: plant-type secondary cell wall biogenesis | 1.28E-02 |
| 71 | GO:0045087: innate immune response | 1.42E-02 |
| 72 | GO:0009637: response to blue light | 1.42E-02 |
| 73 | GO:0006281: DNA repair | 1.48E-02 |
| 74 | GO:0006397: mRNA processing | 1.54E-02 |
| 75 | GO:0006839: mitochondrial transport | 1.55E-02 |
| 76 | GO:0009640: photomorphogenesis | 1.70E-02 |
| 77 | GO:0010114: response to red light | 1.70E-02 |
| 78 | GO:0042546: cell wall biogenesis | 1.75E-02 |
| 79 | GO:0000165: MAPK cascade | 1.94E-02 |
| 80 | GO:0006468: protein phosphorylation | 1.94E-02 |
| 81 | GO:0006364: rRNA processing | 2.10E-02 |
| 82 | GO:0009585: red, far-red light phototransduction | 2.10E-02 |
| 83 | GO:0006417: regulation of translation | 2.25E-02 |
| 84 | GO:0009737: response to abscisic acid | 3.17E-02 |
| 85 | GO:0006413: translational initiation | 3.78E-02 |
| 86 | GO:0009451: RNA modification | 4.04E-02 |
| 87 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.31E-02 |
| 88 | GO:0009739: response to gibberellin | 4.31E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 2 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 3 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 4 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity | 0.00E+00 |
| 6 | GO:0043022: ribosome binding | 3.68E-05 |
| 7 | GO:0005290: L-histidine transmembrane transporter activity | 7.58E-05 |
| 8 | GO:0031516: far-red light photoreceptor activity | 7.58E-05 |
| 9 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 7.58E-05 |
| 10 | GO:0000064: L-ornithine transmembrane transporter activity | 1.81E-04 |
| 11 | GO:0048531: beta-1,3-galactosyltransferase activity | 1.81E-04 |
| 12 | GO:0010291: carotene beta-ring hydroxylase activity | 1.81E-04 |
| 13 | GO:0009883: red or far-red light photoreceptor activity | 1.81E-04 |
| 14 | GO:0004766: spermidine synthase activity | 1.81E-04 |
| 15 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 3.05E-04 |
| 16 | GO:0008020: G-protein coupled photoreceptor activity | 3.05E-04 |
| 17 | GO:0070402: NADPH binding | 3.05E-04 |
| 18 | GO:0015181: arginine transmembrane transporter activity | 4.41E-04 |
| 19 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.41E-04 |
| 20 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 4.41E-04 |
| 21 | GO:0015189: L-lysine transmembrane transporter activity | 4.41E-04 |
| 22 | GO:0005354: galactose transmembrane transporter activity | 4.41E-04 |
| 23 | GO:0005355: glucose transmembrane transporter activity | 4.76E-04 |
| 24 | GO:0015144: carbohydrate transmembrane transporter activity | 5.54E-04 |
| 25 | GO:0004518: nuclease activity | 5.81E-04 |
| 26 | GO:0070628: proteasome binding | 5.87E-04 |
| 27 | GO:0042277: peptide binding | 5.87E-04 |
| 28 | GO:0001053: plastid sigma factor activity | 5.87E-04 |
| 29 | GO:0016987: sigma factor activity | 5.87E-04 |
| 30 | GO:0005351: sugar:proton symporter activity | 6.44E-04 |
| 31 | GO:0031593: polyubiquitin binding | 9.07E-04 |
| 32 | GO:0004672: protein kinase activity | 1.08E-03 |
| 33 | GO:0004427: inorganic diphosphatase activity | 1.26E-03 |
| 34 | GO:0008142: oxysterol binding | 1.66E-03 |
| 35 | GO:0004673: protein histidine kinase activity | 2.32E-03 |
| 36 | GO:0015266: protein channel activity | 3.06E-03 |
| 37 | GO:0008081: phosphoric diester hydrolase activity | 3.06E-03 |
| 38 | GO:0000155: phosphorelay sensor kinase activity | 3.06E-03 |
| 39 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.32E-03 |
| 40 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.89E-03 |
| 41 | GO:0043130: ubiquitin binding | 4.15E-03 |
| 42 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.86E-03 |
| 43 | GO:0008017: microtubule binding | 5.46E-03 |
| 44 | GO:0003723: RNA binding | 6.40E-03 |
| 45 | GO:0004527: exonuclease activity | 6.64E-03 |
| 46 | GO:0016853: isomerase activity | 6.99E-03 |
| 47 | GO:0019901: protein kinase binding | 7.34E-03 |
| 48 | GO:0048038: quinone binding | 7.69E-03 |
| 49 | GO:0016787: hydrolase activity | 8.39E-03 |
| 50 | GO:0003684: damaged DNA binding | 8.79E-03 |
| 51 | GO:0005525: GTP binding | 9.41E-03 |
| 52 | GO:0016413: O-acetyltransferase activity | 9.56E-03 |
| 53 | GO:0008236: serine-type peptidase activity | 1.16E-02 |
| 54 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.20E-02 |
| 55 | GO:0030145: manganese ion binding | 1.33E-02 |
| 56 | GO:0003697: single-stranded DNA binding | 1.42E-02 |
| 57 | GO:0003993: acid phosphatase activity | 1.46E-02 |
| 58 | GO:0003924: GTPase activity | 1.48E-02 |
| 59 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.10E-02 |
| 60 | GO:0003690: double-stranded DNA binding | 2.15E-02 |
| 61 | GO:0003777: microtubule motor activity | 2.25E-02 |
| 62 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.42E-02 |
| 63 | GO:0004650: polygalacturonase activity | 2.53E-02 |
| 64 | GO:0004252: serine-type endopeptidase activity | 3.41E-02 |
| 65 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.47E-02 |
| 66 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.47E-02 |
| 67 | GO:0019825: oxygen binding | 3.74E-02 |
| 68 | GO:0003743: translation initiation factor activity | 4.44E-02 |
| 69 | GO:0042802: identical protein binding | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.30E-04 |
| 2 | GO:0030529: intracellular ribonucleoprotein complex | 7.77E-04 |
| 3 | GO:0031305: integral component of mitochondrial inner membrane | 1.46E-03 |
| 4 | GO:0016604: nuclear body | 2.09E-03 |
| 5 | GO:0009574: preprophase band | 3.06E-03 |
| 6 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.59E-03 |
| 7 | GO:0009532: plastid stroma | 4.73E-03 |
| 8 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 5.66E-03 |
| 9 | GO:0005871: kinesin complex | 5.98E-03 |
| 10 | GO:0009535: chloroplast thylakoid membrane | 8.97E-03 |
| 11 | GO:0005874: microtubule | 9.66E-03 |
| 12 | GO:0005622: intracellular | 1.04E-02 |
| 13 | GO:0009570: chloroplast stroma | 1.46E-02 |
| 14 | GO:0031977: thylakoid lumen | 1.60E-02 |
| 15 | GO:0005856: cytoskeleton | 1.84E-02 |
| 16 | GO:0016607: nuclear speck | 2.42E-02 |
| 17 | GO:0010287: plastoglobule | 3.04E-02 |
| 18 | GO:0009579: thylakoid | 3.14E-02 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 3.16E-02 |
| 20 | GO:0005623: cell | 3.22E-02 |
| 21 | GO:0009524: phragmoplast | 3.28E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 4.85E-02 |