GO Enrichment Analysis of Co-expressed Genes with
AT1G64860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 3 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 4 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 5 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 6 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 7 | GO:0009767: photosynthetic electron transport chain | 1.65E-05 |
| 8 | GO:0010207: photosystem II assembly | 2.03E-05 |
| 9 | GO:0015976: carbon utilization | 2.40E-05 |
| 10 | GO:0009854: oxidative photosynthetic carbon pathway | 8.05E-05 |
| 11 | GO:0034337: RNA folding | 1.77E-04 |
| 12 | GO:0010362: negative regulation of anion channel activity by blue light | 1.77E-04 |
| 13 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.77E-04 |
| 14 | GO:0051775: response to redox state | 1.77E-04 |
| 15 | GO:0046467: membrane lipid biosynthetic process | 1.77E-04 |
| 16 | GO:0019544: arginine catabolic process to glutamate | 1.77E-04 |
| 17 | GO:0000481: maturation of 5S rRNA | 1.77E-04 |
| 18 | GO:0042371: vitamin K biosynthetic process | 1.77E-04 |
| 19 | GO:0015995: chlorophyll biosynthetic process | 2.94E-04 |
| 20 | GO:0043085: positive regulation of catalytic activity | 3.42E-04 |
| 21 | GO:0010155: regulation of proton transport | 4.01E-04 |
| 22 | GO:0051262: protein tetramerization | 4.01E-04 |
| 23 | GO:0009629: response to gravity | 4.01E-04 |
| 24 | GO:0071457: cellular response to ozone | 4.01E-04 |
| 25 | GO:0010541: acropetal auxin transport | 4.01E-04 |
| 26 | GO:0034599: cellular response to oxidative stress | 4.86E-04 |
| 27 | GO:0055114: oxidation-reduction process | 5.65E-04 |
| 28 | GO:0010160: formation of animal organ boundary | 6.55E-04 |
| 29 | GO:0005977: glycogen metabolic process | 6.55E-04 |
| 30 | GO:0006810: transport | 6.97E-04 |
| 31 | GO:0071484: cellular response to light intensity | 9.34E-04 |
| 32 | GO:0006107: oxaloacetate metabolic process | 9.34E-04 |
| 33 | GO:0080170: hydrogen peroxide transmembrane transport | 9.34E-04 |
| 34 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 9.34E-04 |
| 35 | GO:0010731: protein glutathionylation | 9.34E-04 |
| 36 | GO:0071486: cellular response to high light intensity | 1.24E-03 |
| 37 | GO:0015689: molybdate ion transport | 1.24E-03 |
| 38 | GO:0006109: regulation of carbohydrate metabolic process | 1.24E-03 |
| 39 | GO:2000122: negative regulation of stomatal complex development | 1.24E-03 |
| 40 | GO:0030104: water homeostasis | 1.24E-03 |
| 41 | GO:0031122: cytoplasmic microtubule organization | 1.24E-03 |
| 42 | GO:0006546: glycine catabolic process | 1.24E-03 |
| 43 | GO:0006734: NADH metabolic process | 1.24E-03 |
| 44 | GO:0010021: amylopectin biosynthetic process | 1.24E-03 |
| 45 | GO:0010037: response to carbon dioxide | 1.24E-03 |
| 46 | GO:0034220: ion transmembrane transport | 1.25E-03 |
| 47 | GO:0006662: glycerol ether metabolic process | 1.35E-03 |
| 48 | GO:0015979: photosynthesis | 1.52E-03 |
| 49 | GO:0019252: starch biosynthetic process | 1.55E-03 |
| 50 | GO:0006465: signal peptide processing | 1.57E-03 |
| 51 | GO:0071493: cellular response to UV-B | 1.57E-03 |
| 52 | GO:0043097: pyrimidine nucleoside salvage | 1.57E-03 |
| 53 | GO:0009904: chloroplast accumulation movement | 1.57E-03 |
| 54 | GO:0000278: mitotic cell cycle | 1.57E-03 |
| 55 | GO:0042549: photosystem II stabilization | 1.94E-03 |
| 56 | GO:0006206: pyrimidine nucleobase metabolic process | 1.94E-03 |
| 57 | GO:0060918: auxin transport | 1.94E-03 |
| 58 | GO:0010190: cytochrome b6f complex assembly | 1.94E-03 |
| 59 | GO:0050665: hydrogen peroxide biosynthetic process | 1.94E-03 |
| 60 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 2.32E-03 |
| 61 | GO:0009903: chloroplast avoidance movement | 2.32E-03 |
| 62 | GO:0010019: chloroplast-nucleus signaling pathway | 2.32E-03 |
| 63 | GO:0005975: carbohydrate metabolic process | 2.63E-03 |
| 64 | GO:0009645: response to low light intensity stimulus | 2.74E-03 |
| 65 | GO:0006400: tRNA modification | 2.74E-03 |
| 66 | GO:0018298: protein-chromophore linkage | 3.09E-03 |
| 67 | GO:0052543: callose deposition in cell wall | 3.17E-03 |
| 68 | GO:0016559: peroxisome fission | 3.17E-03 |
| 69 | GO:0009690: cytokinin metabolic process | 3.17E-03 |
| 70 | GO:0006605: protein targeting | 3.17E-03 |
| 71 | GO:0032508: DNA duplex unwinding | 3.17E-03 |
| 72 | GO:0031540: regulation of anthocyanin biosynthetic process | 3.17E-03 |
| 73 | GO:0006811: ion transport | 3.41E-03 |
| 74 | GO:0010119: regulation of stomatal movement | 3.57E-03 |
| 75 | GO:0071482: cellular response to light stimulus | 3.63E-03 |
| 76 | GO:0019430: removal of superoxide radicals | 3.63E-03 |
| 77 | GO:0010204: defense response signaling pathway, resistance gene-independent | 3.63E-03 |
| 78 | GO:0017004: cytochrome complex assembly | 3.63E-03 |
| 79 | GO:0009853: photorespiration | 3.91E-03 |
| 80 | GO:0009637: response to blue light | 3.91E-03 |
| 81 | GO:0006754: ATP biosynthetic process | 4.10E-03 |
| 82 | GO:0009638: phototropism | 4.60E-03 |
| 83 | GO:0007346: regulation of mitotic cell cycle | 4.60E-03 |
| 84 | GO:0009926: auxin polar transport | 5.03E-03 |
| 85 | GO:0019538: protein metabolic process | 5.11E-03 |
| 86 | GO:0043069: negative regulation of programmed cell death | 5.11E-03 |
| 87 | GO:0009684: indoleacetic acid biosynthetic process | 5.65E-03 |
| 88 | GO:0019684: photosynthesis, light reaction | 5.65E-03 |
| 89 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.65E-03 |
| 90 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.65E-03 |
| 91 | GO:0008361: regulation of cell size | 6.20E-03 |
| 92 | GO:0009785: blue light signaling pathway | 6.78E-03 |
| 93 | GO:0006108: malate metabolic process | 6.78E-03 |
| 94 | GO:0010540: basipetal auxin transport | 7.37E-03 |
| 95 | GO:0010143: cutin biosynthetic process | 7.37E-03 |
| 96 | GO:0010020: chloroplast fission | 7.37E-03 |
| 97 | GO:0019253: reductive pentose-phosphate cycle | 7.37E-03 |
| 98 | GO:0042343: indole glucosinolate metabolic process | 7.98E-03 |
| 99 | GO:0006833: water transport | 8.61E-03 |
| 100 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.61E-03 |
| 101 | GO:0042023: DNA endoreduplication | 8.61E-03 |
| 102 | GO:0009833: plant-type primary cell wall biogenesis | 8.61E-03 |
| 103 | GO:0007017: microtubule-based process | 9.92E-03 |
| 104 | GO:0009768: photosynthesis, light harvesting in photosystem I | 9.92E-03 |
| 105 | GO:0098542: defense response to other organism | 1.06E-02 |
| 106 | GO:0019748: secondary metabolic process | 1.13E-02 |
| 107 | GO:0048443: stamen development | 1.27E-02 |
| 108 | GO:0009306: protein secretion | 1.27E-02 |
| 109 | GO:0042631: cellular response to water deprivation | 1.43E-02 |
| 110 | GO:0071472: cellular response to salt stress | 1.50E-02 |
| 111 | GO:0009958: positive gravitropism | 1.50E-02 |
| 112 | GO:0006520: cellular amino acid metabolic process | 1.50E-02 |
| 113 | GO:0006633: fatty acid biosynthetic process | 1.52E-02 |
| 114 | GO:0009791: post-embryonic development | 1.66E-02 |
| 115 | GO:0007623: circadian rhythm | 1.68E-02 |
| 116 | GO:0032502: developmental process | 1.83E-02 |
| 117 | GO:1901657: glycosyl compound metabolic process | 1.91E-02 |
| 118 | GO:0009639: response to red or far red light | 2.00E-02 |
| 119 | GO:0010027: thylakoid membrane organization | 2.27E-02 |
| 120 | GO:0009627: systemic acquired resistance | 2.45E-02 |
| 121 | GO:0042128: nitrate assimilation | 2.45E-02 |
| 122 | GO:0009409: response to cold | 2.45E-02 |
| 123 | GO:0009658: chloroplast organization | 2.60E-02 |
| 124 | GO:0016311: dephosphorylation | 2.64E-02 |
| 125 | GO:0030244: cellulose biosynthetic process | 2.74E-02 |
| 126 | GO:0000160: phosphorelay signal transduction system | 2.84E-02 |
| 127 | GO:0009813: flavonoid biosynthetic process | 2.84E-02 |
| 128 | GO:0010218: response to far red light | 2.94E-02 |
| 129 | GO:0048527: lateral root development | 3.04E-02 |
| 130 | GO:0009631: cold acclimation | 3.04E-02 |
| 131 | GO:0006099: tricarboxylic acid cycle | 3.35E-02 |
| 132 | GO:0006631: fatty acid metabolic process | 3.67E-02 |
| 133 | GO:0045454: cell redox homeostasis | 3.85E-02 |
| 134 | GO:0009640: photomorphogenesis | 3.88E-02 |
| 135 | GO:0009644: response to high light intensity | 4.11E-02 |
| 136 | GO:0009636: response to toxic substance | 4.22E-02 |
| 137 | GO:0016042: lipid catabolic process | 4.60E-02 |
| 138 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.92E-02 |
| 139 | GO:0010224: response to UV-B | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 3 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 4 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 5 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 6 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 7 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 8 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 9 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 10 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 11 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 12 | GO:0016491: oxidoreductase activity | 3.22E-06 |
| 13 | GO:0009011: starch synthase activity | 2.40E-05 |
| 14 | GO:0000293: ferric-chelate reductase activity | 5.77E-05 |
| 15 | GO:0046906: tetrapyrrole binding | 1.77E-04 |
| 16 | GO:0005227: calcium activated cation channel activity | 1.77E-04 |
| 17 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.77E-04 |
| 18 | GO:0008568: microtubule-severing ATPase activity | 1.77E-04 |
| 19 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.77E-04 |
| 20 | GO:0004328: formamidase activity | 1.77E-04 |
| 21 | GO:0004047: aminomethyltransferase activity | 4.01E-04 |
| 22 | GO:0004312: fatty acid synthase activity | 4.01E-04 |
| 23 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 4.01E-04 |
| 24 | GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity | 4.01E-04 |
| 25 | GO:0019156: isoamylase activity | 4.01E-04 |
| 26 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 4.01E-04 |
| 27 | GO:0004103: choline kinase activity | 4.01E-04 |
| 28 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 4.01E-04 |
| 29 | GO:0004565: beta-galactosidase activity | 4.47E-04 |
| 30 | GO:0004089: carbonate dehydratase activity | 4.47E-04 |
| 31 | GO:0050734: hydroxycinnamoyltransferase activity | 6.55E-04 |
| 32 | GO:0070402: NADPH binding | 6.55E-04 |
| 33 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 6.55E-04 |
| 34 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 9.34E-04 |
| 35 | GO:0001872: (1->3)-beta-D-glucan binding | 9.34E-04 |
| 36 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 9.34E-04 |
| 37 | GO:0016851: magnesium chelatase activity | 9.34E-04 |
| 38 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 9.34E-04 |
| 39 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 9.34E-04 |
| 40 | GO:0009882: blue light photoreceptor activity | 9.34E-04 |
| 41 | GO:0047134: protein-disulfide reductase activity | 1.16E-03 |
| 42 | GO:0008453: alanine-glyoxylate transaminase activity | 1.24E-03 |
| 43 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.24E-03 |
| 44 | GO:0015098: molybdate ion transmembrane transporter activity | 1.24E-03 |
| 45 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.24E-03 |
| 46 | GO:0008891: glycolate oxidase activity | 1.24E-03 |
| 47 | GO:0004791: thioredoxin-disulfide reductase activity | 1.44E-03 |
| 48 | GO:0010181: FMN binding | 1.44E-03 |
| 49 | GO:0016846: carbon-sulfur lyase activity | 1.57E-03 |
| 50 | GO:0004040: amidase activity | 1.57E-03 |
| 51 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.88E-03 |
| 52 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 1.94E-03 |
| 53 | GO:0004784: superoxide dismutase activity | 1.94E-03 |
| 54 | GO:0004556: alpha-amylase activity | 1.94E-03 |
| 55 | GO:0016615: malate dehydrogenase activity | 1.94E-03 |
| 56 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.32E-03 |
| 57 | GO:0030060: L-malate dehydrogenase activity | 2.32E-03 |
| 58 | GO:0005261: cation channel activity | 2.32E-03 |
| 59 | GO:0004849: uridine kinase activity | 2.32E-03 |
| 60 | GO:0015250: water channel activity | 2.38E-03 |
| 61 | GO:0019899: enzyme binding | 2.74E-03 |
| 62 | GO:0004033: aldo-keto reductase (NADP) activity | 3.17E-03 |
| 63 | GO:0008135: translation factor activity, RNA binding | 3.63E-03 |
| 64 | GO:0042802: identical protein binding | 3.84E-03 |
| 65 | GO:0003993: acid phosphatase activity | 4.09E-03 |
| 66 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 4.10E-03 |
| 67 | GO:0016887: ATPase activity | 4.37E-03 |
| 68 | GO:0004185: serine-type carboxypeptidase activity | 5.03E-03 |
| 69 | GO:0008047: enzyme activator activity | 5.11E-03 |
| 70 | GO:0010329: auxin efflux transmembrane transporter activity | 6.78E-03 |
| 71 | GO:0031072: heat shock protein binding | 6.78E-03 |
| 72 | GO:0000155: phosphorelay sensor kinase activity | 6.78E-03 |
| 73 | GO:0008266: poly(U) RNA binding | 7.37E-03 |
| 74 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 8.18E-03 |
| 75 | GO:0031409: pigment binding | 8.61E-03 |
| 76 | GO:0004857: enzyme inhibitor activity | 9.26E-03 |
| 77 | GO:0043130: ubiquitin binding | 9.26E-03 |
| 78 | GO:0005528: FK506 binding | 9.26E-03 |
| 79 | GO:0015035: protein disulfide oxidoreductase activity | 9.95E-03 |
| 80 | GO:0003924: GTPase activity | 1.06E-02 |
| 81 | GO:0030570: pectate lyase activity | 1.20E-02 |
| 82 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.20E-02 |
| 83 | GO:0030170: pyridoxal phosphate binding | 1.35E-02 |
| 84 | GO:0008080: N-acetyltransferase activity | 1.50E-02 |
| 85 | GO:0019901: protein kinase binding | 1.66E-02 |
| 86 | GO:0048038: quinone binding | 1.75E-02 |
| 87 | GO:0016759: cellulose synthase activity | 2.00E-02 |
| 88 | GO:0008483: transaminase activity | 2.09E-02 |
| 89 | GO:0005200: structural constituent of cytoskeleton | 2.09E-02 |
| 90 | GO:0016168: chlorophyll binding | 2.36E-02 |
| 91 | GO:0102483: scopolin beta-glucosidase activity | 2.55E-02 |
| 92 | GO:0030247: polysaccharide binding | 2.55E-02 |
| 93 | GO:0016788: hydrolase activity, acting on ester bonds | 2.65E-02 |
| 94 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.74E-02 |
| 95 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.94E-02 |
| 96 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.04E-02 |
| 97 | GO:0003746: translation elongation factor activity | 3.24E-02 |
| 98 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.45E-02 |
| 99 | GO:0008422: beta-glucosidase activity | 3.45E-02 |
| 100 | GO:0042393: histone binding | 3.56E-02 |
| 101 | GO:0052689: carboxylic ester hydrolase activity | 3.56E-02 |
| 102 | GO:0004364: glutathione transferase activity | 3.78E-02 |
| 103 | GO:0005525: GTP binding | 4.08E-02 |
| 104 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.11E-02 |
| 105 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.33E-02 |
| 106 | GO:0051287: NAD binding | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.22E-19 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 8.04E-09 |
| 3 | GO:0009570: chloroplast stroma | 8.10E-07 |
| 4 | GO:0009941: chloroplast envelope | 2.30E-05 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 2.70E-05 |
| 6 | GO:0005773: vacuole | 1.55E-04 |
| 7 | GO:0048046: apoplast | 1.60E-04 |
| 8 | GO:0009782: photosystem I antenna complex | 1.77E-04 |
| 9 | GO:0043674: columella | 1.77E-04 |
| 10 | GO:0005787: signal peptidase complex | 1.77E-04 |
| 11 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.77E-04 |
| 12 | GO:0009534: chloroplast thylakoid | 4.11E-04 |
| 13 | GO:0031977: thylakoid lumen | 5.71E-04 |
| 14 | GO:0010007: magnesium chelatase complex | 6.55E-04 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 7.64E-04 |
| 16 | GO:0009898: cytoplasmic side of plasma membrane | 1.24E-03 |
| 17 | GO:0005777: peroxisome | 1.59E-03 |
| 18 | GO:0009579: thylakoid | 1.71E-03 |
| 19 | GO:0010319: stromule | 2.12E-03 |
| 20 | GO:0042807: central vacuole | 2.74E-03 |
| 21 | GO:0009986: cell surface | 2.74E-03 |
| 22 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 3.63E-03 |
| 23 | GO:0009539: photosystem II reaction center | 3.63E-03 |
| 24 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.10E-03 |
| 25 | GO:0045298: tubulin complex | 4.10E-03 |
| 26 | GO:0032040: small-subunit processome | 6.20E-03 |
| 27 | GO:0031969: chloroplast membrane | 6.49E-03 |
| 28 | GO:0030095: chloroplast photosystem II | 7.37E-03 |
| 29 | GO:0030076: light-harvesting complex | 7.98E-03 |
| 30 | GO:0016020: membrane | 8.96E-03 |
| 31 | GO:0009522: photosystem I | 1.58E-02 |
| 32 | GO:0009523: photosystem II | 1.66E-02 |
| 33 | GO:0019898: extrinsic component of membrane | 1.66E-02 |
| 34 | GO:0009705: plant-type vacuole membrane | 1.68E-02 |
| 35 | GO:0016021: integral component of membrane | 1.95E-02 |
| 36 | GO:0046658: anchored component of plasma membrane | 2.22E-02 |
| 37 | GO:0030529: intracellular ribonucleoprotein complex | 2.27E-02 |
| 38 | GO:0005886: plasma membrane | 2.72E-02 |
| 39 | GO:0019005: SCF ubiquitin ligase complex | 2.74E-02 |
| 40 | GO:0009707: chloroplast outer membrane | 2.74E-02 |