GO Enrichment Analysis of Co-expressed Genes with
AT1G64680
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 3 | GO:0035674: tricarboxylic acid transmembrane transport | 0.00E+00 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 9.78E-12 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 4.00E-10 |
| 6 | GO:0015979: photosynthesis | 1.88E-08 |
| 7 | GO:0006094: gluconeogenesis | 3.12E-07 |
| 8 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.70E-06 |
| 9 | GO:0010206: photosystem II repair | 5.10E-06 |
| 10 | GO:0006000: fructose metabolic process | 6.26E-06 |
| 11 | GO:0090391: granum assembly | 6.26E-06 |
| 12 | GO:0005983: starch catabolic process | 1.52E-05 |
| 13 | GO:0010207: photosystem II assembly | 2.32E-05 |
| 14 | GO:0015994: chlorophyll metabolic process | 2.66E-05 |
| 15 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.37E-05 |
| 16 | GO:0006810: transport | 4.62E-05 |
| 17 | GO:0010196: nonphotochemical quenching | 1.18E-04 |
| 18 | GO:0009772: photosynthetic electron transport in photosystem II | 1.18E-04 |
| 19 | GO:0055114: oxidation-reduction process | 1.33E-04 |
| 20 | GO:0009642: response to light intensity | 1.51E-04 |
| 21 | GO:0000025: maltose catabolic process | 1.88E-04 |
| 22 | GO:0005980: glycogen catabolic process | 1.88E-04 |
| 23 | GO:0080093: regulation of photorespiration | 1.88E-04 |
| 24 | GO:0031998: regulation of fatty acid beta-oxidation | 1.88E-04 |
| 25 | GO:0010028: xanthophyll cycle | 1.88E-04 |
| 26 | GO:0006835: dicarboxylic acid transport | 1.88E-04 |
| 27 | GO:0000023: maltose metabolic process | 1.88E-04 |
| 28 | GO:0006002: fructose 6-phosphate metabolic process | 1.88E-04 |
| 29 | GO:0006098: pentose-phosphate shunt | 2.29E-04 |
| 30 | GO:0043085: positive regulation of catalytic activity | 3.73E-04 |
| 31 | GO:0005976: polysaccharide metabolic process | 4.24E-04 |
| 32 | GO:0010353: response to trehalose | 4.24E-04 |
| 33 | GO:0016122: xanthophyll metabolic process | 4.24E-04 |
| 34 | GO:0005986: sucrose biosynthetic process | 4.86E-04 |
| 35 | GO:0019253: reductive pentose-phosphate cycle | 5.47E-04 |
| 36 | GO:0006518: peptide metabolic process | 6.92E-04 |
| 37 | GO:0061077: chaperone-mediated protein folding | 9.07E-04 |
| 38 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 9.86E-04 |
| 39 | GO:1902358: sulfate transmembrane transport | 9.86E-04 |
| 40 | GO:0006020: inositol metabolic process | 9.86E-04 |
| 41 | GO:0071484: cellular response to light intensity | 9.86E-04 |
| 42 | GO:0006096: glycolytic process | 1.25E-03 |
| 43 | GO:0045727: positive regulation of translation | 1.31E-03 |
| 44 | GO:0006021: inositol biosynthetic process | 1.31E-03 |
| 45 | GO:0010021: amylopectin biosynthetic process | 1.31E-03 |
| 46 | GO:0006109: regulation of carbohydrate metabolic process | 1.31E-03 |
| 47 | GO:0006662: glycerol ether metabolic process | 1.46E-03 |
| 48 | GO:0006656: phosphatidylcholine biosynthetic process | 1.66E-03 |
| 49 | GO:0006097: glyoxylate cycle | 1.66E-03 |
| 50 | GO:0046855: inositol phosphate dephosphorylation | 2.05E-03 |
| 51 | GO:1902456: regulation of stomatal opening | 2.05E-03 |
| 52 | GO:0010190: cytochrome b6f complex assembly | 2.05E-03 |
| 53 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 2.05E-03 |
| 54 | GO:0042549: photosystem II stabilization | 2.05E-03 |
| 55 | GO:0032259: methylation | 2.39E-03 |
| 56 | GO:0010189: vitamin E biosynthetic process | 2.46E-03 |
| 57 | GO:0009854: oxidative photosynthetic carbon pathway | 2.46E-03 |
| 58 | GO:0010027: thylakoid membrane organization | 2.58E-03 |
| 59 | GO:0006633: fatty acid biosynthetic process | 2.80E-03 |
| 60 | GO:0008272: sulfate transport | 2.90E-03 |
| 61 | GO:0009610: response to symbiotic fungus | 2.90E-03 |
| 62 | GO:0016311: dephosphorylation | 3.20E-03 |
| 63 | GO:0019827: stem cell population maintenance | 3.36E-03 |
| 64 | GO:0005978: glycogen biosynthetic process | 3.36E-03 |
| 65 | GO:0030091: protein repair | 3.36E-03 |
| 66 | GO:0032544: plastid translation | 3.84E-03 |
| 67 | GO:0015996: chlorophyll catabolic process | 3.84E-03 |
| 68 | GO:0009631: cold acclimation | 3.88E-03 |
| 69 | GO:0006754: ATP biosynthetic process | 4.35E-03 |
| 70 | GO:0034599: cellular response to oxidative stress | 4.45E-03 |
| 71 | GO:0005982: starch metabolic process | 4.87E-03 |
| 72 | GO:0010205: photoinhibition | 4.87E-03 |
| 73 | GO:0006631: fatty acid metabolic process | 5.05E-03 |
| 74 | GO:0009735: response to cytokinin | 5.34E-03 |
| 75 | GO:0009641: shade avoidance | 5.42E-03 |
| 76 | GO:0010114: response to red light | 5.48E-03 |
| 77 | GO:0042254: ribosome biogenesis | 5.63E-03 |
| 78 | GO:0000272: polysaccharide catabolic process | 5.99E-03 |
| 79 | GO:0009750: response to fructose | 5.99E-03 |
| 80 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.99E-03 |
| 81 | GO:0006790: sulfur compound metabolic process | 6.58E-03 |
| 82 | GO:0006108: malate metabolic process | 7.19E-03 |
| 83 | GO:0006006: glucose metabolic process | 7.19E-03 |
| 84 | GO:0018107: peptidyl-threonine phosphorylation | 7.19E-03 |
| 85 | GO:0009725: response to hormone | 7.19E-03 |
| 86 | GO:0080167: response to karrikin | 7.22E-03 |
| 87 | GO:0006364: rRNA processing | 7.38E-03 |
| 88 | GO:0010143: cutin biosynthetic process | 7.82E-03 |
| 89 | GO:0010223: secondary shoot formation | 7.82E-03 |
| 90 | GO:0009266: response to temperature stimulus | 7.82E-03 |
| 91 | GO:0005985: sucrose metabolic process | 8.47E-03 |
| 92 | GO:0046854: phosphatidylinositol phosphorylation | 8.47E-03 |
| 93 | GO:0010025: wax biosynthetic process | 9.14E-03 |
| 94 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.05E-02 |
| 95 | GO:0035428: hexose transmembrane transport | 1.20E-02 |
| 96 | GO:0016226: iron-sulfur cluster assembly | 1.20E-02 |
| 97 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.20E-02 |
| 98 | GO:0019748: secondary metabolic process | 1.20E-02 |
| 99 | GO:0070417: cellular response to cold | 1.43E-02 |
| 100 | GO:0000413: protein peptidyl-prolyl isomerization | 1.51E-02 |
| 101 | GO:0006606: protein import into nucleus | 1.51E-02 |
| 102 | GO:0042631: cellular response to water deprivation | 1.51E-02 |
| 103 | GO:0046323: glucose import | 1.60E-02 |
| 104 | GO:0009741: response to brassinosteroid | 1.60E-02 |
| 105 | GO:0015986: ATP synthesis coupled proton transport | 1.68E-02 |
| 106 | GO:0019252: starch biosynthetic process | 1.77E-02 |
| 107 | GO:0006979: response to oxidative stress | 1.80E-02 |
| 108 | GO:0009630: gravitropism | 1.94E-02 |
| 109 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.51E-02 |
| 110 | GO:0009409: response to cold | 2.78E-02 |
| 111 | GO:0009658: chloroplast organization | 2.83E-02 |
| 112 | GO:0018298: protein-chromophore linkage | 2.91E-02 |
| 113 | GO:0045893: positive regulation of transcription, DNA-templated | 2.91E-02 |
| 114 | GO:0010311: lateral root formation | 3.02E-02 |
| 115 | GO:0000160: phosphorelay signal transduction system | 3.02E-02 |
| 116 | GO:0010218: response to far red light | 3.12E-02 |
| 117 | GO:0007568: aging | 3.23E-02 |
| 118 | GO:0009637: response to blue light | 3.45E-02 |
| 119 | GO:0009853: photorespiration | 3.45E-02 |
| 120 | GO:0006099: tricarboxylic acid cycle | 3.56E-02 |
| 121 | GO:0006839: mitochondrial transport | 3.78E-02 |
| 122 | GO:0009744: response to sucrose | 4.13E-02 |
| 123 | GO:0045454: cell redox homeostasis | 4.18E-02 |
| 124 | GO:0000209: protein polyubiquitination | 4.24E-02 |
| 125 | GO:0006869: lipid transport | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 3 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 4 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 5 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 6 | GO:0015142: tricarboxylic acid transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 8 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 9 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 10 | GO:0010297: heteropolysaccharide binding | 1.70E-06 |
| 11 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.70E-06 |
| 12 | GO:0016851: magnesium chelatase activity | 1.44E-05 |
| 13 | GO:0005528: FK506 binding | 3.99E-05 |
| 14 | GO:0004332: fructose-bisphosphate aldolase activity | 6.36E-05 |
| 15 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.24E-05 |
| 16 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.88E-04 |
| 17 | GO:0045485: omega-6 fatty acid desaturase activity | 1.88E-04 |
| 18 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 1.88E-04 |
| 19 | GO:0004134: 4-alpha-glucanotransferase activity | 1.88E-04 |
| 20 | GO:0004645: phosphorylase activity | 1.88E-04 |
| 21 | GO:0034256: chlorophyll(ide) b reductase activity | 1.88E-04 |
| 22 | GO:0035671: enone reductase activity | 1.88E-04 |
| 23 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.88E-04 |
| 24 | GO:0050521: alpha-glucan, water dikinase activity | 1.88E-04 |
| 25 | GO:0008184: glycogen phosphorylase activity | 1.88E-04 |
| 26 | GO:0008047: enzyme activator activity | 3.21E-04 |
| 27 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.24E-04 |
| 28 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.24E-04 |
| 29 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.24E-04 |
| 30 | GO:0008967: phosphoglycolate phosphatase activity | 4.24E-04 |
| 31 | GO:0018708: thiol S-methyltransferase activity | 4.24E-04 |
| 32 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 4.24E-04 |
| 33 | GO:0016630: protochlorophyllide reductase activity | 4.24E-04 |
| 34 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 4.24E-04 |
| 35 | GO:0047746: chlorophyllase activity | 4.24E-04 |
| 36 | GO:0042389: omega-3 fatty acid desaturase activity | 4.24E-04 |
| 37 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.24E-04 |
| 38 | GO:0031072: heat shock protein binding | 4.86E-04 |
| 39 | GO:0043169: cation binding | 6.92E-04 |
| 40 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 6.92E-04 |
| 41 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.92E-04 |
| 42 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 6.92E-04 |
| 43 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 9.86E-04 |
| 44 | GO:0017077: oxidative phosphorylation uncoupler activity | 9.86E-04 |
| 45 | GO:0019201: nucleotide kinase activity | 9.86E-04 |
| 46 | GO:0047134: protein-disulfide reductase activity | 1.26E-03 |
| 47 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.31E-03 |
| 48 | GO:0004791: thioredoxin-disulfide reductase activity | 1.57E-03 |
| 49 | GO:0048038: quinone binding | 1.80E-03 |
| 50 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.04E-03 |
| 51 | GO:0016615: malate dehydrogenase activity | 2.05E-03 |
| 52 | GO:0008200: ion channel inhibitor activity | 2.05E-03 |
| 53 | GO:2001070: starch binding | 2.05E-03 |
| 54 | GO:0019843: rRNA binding | 2.10E-03 |
| 55 | GO:0016491: oxidoreductase activity | 2.35E-03 |
| 56 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.46E-03 |
| 57 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.46E-03 |
| 58 | GO:0102391: decanoate--CoA ligase activity | 2.46E-03 |
| 59 | GO:0030060: L-malate dehydrogenase activity | 2.46E-03 |
| 60 | GO:0004017: adenylate kinase activity | 2.46E-03 |
| 61 | GO:0004602: glutathione peroxidase activity | 2.46E-03 |
| 62 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.90E-03 |
| 63 | GO:0004033: aldo-keto reductase (NADP) activity | 3.36E-03 |
| 64 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.84E-03 |
| 65 | GO:0008271: secondary active sulfate transmembrane transporter activity | 3.84E-03 |
| 66 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.87E-03 |
| 67 | GO:0008168: methyltransferase activity | 5.24E-03 |
| 68 | GO:0030234: enzyme regulator activity | 5.42E-03 |
| 69 | GO:0051537: 2 iron, 2 sulfur cluster binding | 5.93E-03 |
| 70 | GO:0015386: potassium:proton antiporter activity | 5.99E-03 |
| 71 | GO:0044183: protein binding involved in protein folding | 5.99E-03 |
| 72 | GO:0047372: acylglycerol lipase activity | 5.99E-03 |
| 73 | GO:0015116: sulfate transmembrane transporter activity | 6.58E-03 |
| 74 | GO:0004565: beta-galactosidase activity | 7.19E-03 |
| 75 | GO:0031409: pigment binding | 9.14E-03 |
| 76 | GO:0051536: iron-sulfur cluster binding | 9.83E-03 |
| 77 | GO:0004857: enzyme inhibitor activity | 9.83E-03 |
| 78 | GO:0015079: potassium ion transmembrane transporter activity | 1.05E-02 |
| 79 | GO:0051082: unfolded protein binding | 1.05E-02 |
| 80 | GO:0015035: protein disulfide oxidoreductase activity | 1.08E-02 |
| 81 | GO:0003756: protein disulfide isomerase activity | 1.35E-02 |
| 82 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.60E-02 |
| 83 | GO:0008536: Ran GTPase binding | 1.60E-02 |
| 84 | GO:0005355: glucose transmembrane transporter activity | 1.68E-02 |
| 85 | GO:0050662: coenzyme binding | 1.68E-02 |
| 86 | GO:0004872: receptor activity | 1.77E-02 |
| 87 | GO:0000156: phosphorelay response regulator activity | 2.03E-02 |
| 88 | GO:0016168: chlorophyll binding | 2.51E-02 |
| 89 | GO:0004222: metalloendopeptidase activity | 3.12E-02 |
| 90 | GO:0003746: translation elongation factor activity | 3.45E-02 |
| 91 | GO:0003993: acid phosphatase activity | 3.56E-02 |
| 92 | GO:0050661: NADP binding | 3.78E-02 |
| 93 | GO:0004185: serine-type carboxypeptidase activity | 4.13E-02 |
| 94 | GO:0015293: symporter activity | 4.48E-02 |
| 95 | GO:0051287: NAD binding | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0042579: microbody | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 8.10E-51 |
| 4 | GO:0009534: chloroplast thylakoid | 5.93E-41 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.47E-40 |
| 6 | GO:0009941: chloroplast envelope | 9.24E-27 |
| 7 | GO:0009570: chloroplast stroma | 9.96E-17 |
| 8 | GO:0009579: thylakoid | 6.81E-15 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 9.50E-14 |
| 10 | GO:0031977: thylakoid lumen | 1.29E-12 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.50E-12 |
| 12 | GO:0031969: chloroplast membrane | 1.89E-07 |
| 13 | GO:0010287: plastoglobule | 1.77E-06 |
| 14 | GO:0010007: magnesium chelatase complex | 6.26E-06 |
| 15 | GO:0009706: chloroplast inner membrane | 2.21E-04 |
| 16 | GO:0010319: stromule | 2.25E-04 |
| 17 | GO:0031357: integral component of chloroplast inner membrane | 4.24E-04 |
| 18 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 4.24E-04 |
| 19 | GO:0030095: chloroplast photosystem II | 5.47E-04 |
| 20 | GO:0048046: apoplast | 6.93E-04 |
| 21 | GO:0042651: thylakoid membrane | 8.29E-04 |
| 22 | GO:0009544: chloroplast ATP synthase complex | 1.31E-03 |
| 23 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.05E-03 |
| 24 | GO:0009538: photosystem I reaction center | 3.36E-03 |
| 25 | GO:0009501: amyloplast | 3.36E-03 |
| 26 | GO:0030076: light-harvesting complex | 8.47E-03 |
| 27 | GO:0009654: photosystem II oxygen evolving complex | 1.05E-02 |
| 28 | GO:0015935: small ribosomal subunit | 1.13E-02 |
| 29 | GO:0005623: cell | 1.36E-02 |
| 30 | GO:0009522: photosystem I | 1.68E-02 |
| 31 | GO:0019898: extrinsic component of membrane | 1.77E-02 |
| 32 | GO:0009707: chloroplast outer membrane | 2.91E-02 |
| 33 | GO:0016021: integral component of membrane | 3.05E-02 |
| 34 | GO:0016020: membrane | 4.28E-02 |