co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G64150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002184: cytoplasmic translational termination	0.00E+00
2	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
3	GO:0033614: chloroplast proton-transporting ATP synthase complex assembly	0.00E+00
4	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
5	GO:0015995: chlorophyll biosynthetic process	3.64E-09
6	GO:0032544: plastid translation	1.44E-06
7	GO:0006412: translation	4.42E-06
8	GO:0042254: ribosome biogenesis	4.44E-06
9	GO:0009735: response to cytokinin	8.90E-06
10	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.44E-05
11	GO:1901259: chloroplast rRNA processing	4.86E-05
12	GO:0015979: photosynthesis	1.18E-04
13	GO:0034337: RNA folding	1.30E-04
14	GO:0000476: maturation of 4.5S rRNA	1.30E-04
15	GO:0000967: rRNA 5'-end processing	1.30E-04
16	GO:0006783: heme biosynthetic process	1.31E-04
17	GO:0006782: protoporphyrinogen IX biosynthetic process	1.87E-04
18	GO:0034470: ncRNA processing	2.99E-04
19	GO:0031537: regulation of anthocyanin metabolic process	2.99E-04
20	GO:0010207: photosystem II assembly	3.27E-04
21	GO:0009405: pathogenesis	4.92E-04
22	GO:0006418: tRNA aminoacylation for protein translation	5.01E-04
23	GO:0006020: inositol metabolic process	7.04E-04
24	GO:0071484: cellular response to light intensity	7.04E-04
25	GO:0051085: chaperone mediated protein folding requiring cofactor	7.04E-04
26	GO:0010731: protein glutathionylation	7.04E-04
27	GO:0006021: inositol biosynthetic process	9.34E-04
28	GO:0019252: starch biosynthetic process	1.02E-03
29	GO:0007094: mitotic spindle assembly checkpoint	1.18E-03
30	GO:0071368: cellular response to cytokinin stimulus	1.18E-03
31	GO:0000470: maturation of LSU-rRNA	1.45E-03
32	GO:0046855: inositol phosphate dephosphorylation	1.45E-03
33	GO:1902456: regulation of stomatal opening	1.45E-03
34	GO:0010190: cytochrome b6f complex assembly	1.45E-03
35	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.45E-03
36	GO:0080036: regulation of cytokinin-activated signaling pathway	1.73E-03
37	GO:0009955: adaxial/abaxial pattern specification	1.73E-03
38	GO:0042026: protein refolding	1.73E-03
39	GO:0080113: regulation of seed growth	1.73E-03
40	GO:0000160: phosphorelay signal transduction system	2.11E-03
41	GO:0009813: flavonoid biosynthetic process	2.11E-03
42	GO:0005978: glycogen biosynthetic process	2.36E-03
43	GO:0006353: DNA-templated transcription, termination	2.36E-03
44	GO:0009658: chloroplast organization	2.82E-03
45	GO:0010206: photosystem II repair	3.04E-03
46	GO:0010380: regulation of chlorophyll biosynthetic process	3.41E-03
47	GO:0006457: protein folding	4.06E-03
48	GO:0006415: translational termination	4.18E-03
49	GO:0009736: cytokinin-activated signaling pathway	4.38E-03
50	GO:0006790: sulfur compound metabolic process	4.58E-03
51	GO:0005983: starch catabolic process	4.58E-03
52	GO:0048367: shoot system development	5.34E-03
53	GO:0046854: phosphatidylinositol phosphorylation	5.88E-03
54	GO:0000027: ribosomal large subunit assembly	6.81E-03
55	GO:0051017: actin filament bundle assembly	6.81E-03
56	GO:0043622: cortical microtubule organization	7.30E-03
57	GO:0009768: photosynthesis, light harvesting in photosystem I	7.30E-03
58	GO:0061077: chaperone-mediated protein folding	7.79E-03
59	GO:0051321: meiotic cell cycle	7.79E-03
60	GO:0016114: terpenoid biosynthetic process	7.79E-03
61	GO:0016226: iron-sulfur cluster assembly	8.30E-03
62	GO:0007005: mitochondrion organization	8.30E-03
63	GO:0006012: galactose metabolic process	8.82E-03
64	GO:0010082: regulation of root meristem growth	8.82E-03
65	GO:0006633: fatty acid biosynthetic process	9.79E-03
66	GO:0016117: carotenoid biosynthetic process	9.90E-03
67	GO:0080022: primary root development	1.04E-02
68	GO:0007059: chromosome segregation	1.16E-02
69	GO:0009409: response to cold	1.26E-02
70	GO:0010027: thylakoid membrane organization	1.66E-02
71	GO:0009627: systemic acquired resistance	1.79E-02
72	GO:0009817: defense response to fungus, incompatible interaction	2.00E-02
73	GO:0048481: plant ovule development	2.00E-02
74	GO:0008219: cell death	2.00E-02
75	GO:0006839: mitochondrial transport	2.60E-02
76	GO:0006631: fatty acid metabolic process	2.68E-02
77	GO:0032259: methylation	2.93E-02
78	GO:0006629: lipid metabolic process	3.06E-02
79	GO:0042538: hyperosmotic salinity response	3.34E-02
80	GO:0008152: metabolic process	3.37E-02
81	GO:0006364: rRNA processing	3.51E-02
82	GO:0055114: oxidation-reduction process	3.70E-02
83	GO:0006096: glycolytic process	3.95E-02
84	GO:0042545: cell wall modification	4.41E-02
85	GO:0006396: RNA processing	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
2	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
3	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
4	GO:0090711: FMN hydrolase activity	0.00E+00
5	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
6	GO:0010303: limit dextrinase activity	0.00E+00
7	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
8	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
9	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
10	GO:0051060: pullulanase activity	0.00E+00
11	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
12	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
13	GO:0046408: chlorophyll synthetase activity	0.00E+00
14	GO:0019843: rRNA binding	1.09E-11
15	GO:0003735: structural constituent of ribosome	3.01E-07
16	GO:0045430: chalcone isomerase activity	1.40E-05
17	GO:0005528: FK506 binding	1.73E-05
18	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.44E-05
19	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	1.30E-04
20	GO:0052832: inositol monophosphate 3-phosphatase activity	2.99E-04
21	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	2.99E-04
22	GO:0008934: inositol monophosphate 1-phosphatase activity	2.99E-04
23	GO:0052833: inositol monophosphate 4-phosphatase activity	2.99E-04
24	GO:0008967: phosphoglycolate phosphatase activity	2.99E-04
25	GO:0016630: protochlorophyllide reductase activity	2.99E-04
26	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	4.92E-04
27	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	4.92E-04
28	GO:0002161: aminoacyl-tRNA editing activity	4.92E-04
29	GO:0005504: fatty acid binding	4.92E-04
30	GO:0090729: toxin activity	4.92E-04
31	GO:0045174: glutathione dehydrogenase (ascorbate) activity	4.92E-04
32	GO:0008097: 5S rRNA binding	7.04E-04
33	GO:0019201: nucleotide kinase activity	7.04E-04
34	GO:0016851: magnesium chelatase activity	7.04E-04
35	GO:0016149: translation release factor activity, codon specific	7.04E-04
36	GO:0043023: ribosomal large subunit binding	7.04E-04
37	GO:0004812: aminoacyl-tRNA ligase activity	7.67E-04
38	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	9.34E-04
39	GO:0008878: glucose-1-phosphate adenylyltransferase activity	9.34E-04
40	GO:0003959: NADPH dehydrogenase activity	1.18E-03
41	GO:0000156: phosphorelay response regulator activity	1.23E-03
42	GO:0004709: MAP kinase kinase kinase activity	1.45E-03
43	GO:0004556: alpha-amylase activity	1.45E-03
44	GO:0051920: peroxiredoxin activity	1.73E-03
45	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.73E-03
46	GO:0004017: adenylate kinase activity	1.73E-03
47	GO:0016209: antioxidant activity	2.36E-03
48	GO:0004034: aldose 1-epimerase activity	2.36E-03
49	GO:0004033: aldo-keto reductase (NADP) activity	2.36E-03
50	GO:0004525: ribonuclease III activity	2.36E-03
51	GO:0003747: translation release factor activity	3.04E-03
52	GO:0016491: oxidoreductase activity	3.22E-03
53	GO:0047617: acyl-CoA hydrolase activity	3.41E-03
54	GO:0044183: protein binding involved in protein folding	4.18E-03
55	GO:0047372: acylglycerol lipase activity	4.18E-03
56	GO:0000049: tRNA binding	4.58E-03
57	GO:0031072: heat shock protein binding	5.00E-03
58	GO:0008266: poly(U) RNA binding	5.44E-03
59	GO:0051082: unfolded protein binding	6.22E-03
60	GO:0031409: pigment binding	6.34E-03
61	GO:0051536: iron-sulfur cluster binding	6.81E-03
62	GO:0005102: receptor binding	9.90E-03
63	GO:0003723: RNA binding	9.91E-03
64	GO:0016853: isomerase activity	1.16E-02
65	GO:0051015: actin filament binding	1.40E-02
66	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.53E-02
67	GO:0008237: metallopeptidase activity	1.53E-02
68	GO:0008168: methyltransferase activity	1.61E-02
69	GO:0016168: chlorophyll binding	1.73E-02
70	GO:0005507: copper ion binding	1.97E-02
71	GO:0004222: metalloendopeptidase activity	2.15E-02
72	GO:0004364: glutathione transferase activity	2.76E-02
73	GO:0043621: protein self-association	3.00E-02
74	GO:0045330: aspartyl esterase activity	3.77E-02
75	GO:0030599: pectinesterase activity	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0010170: glucose-1-phosphate adenylyltransferase complex	0.00E+00
3	GO:0005835: fatty acid synthase complex	0.00E+00
4	GO:0009575: chromoplast stroma	0.00E+00
5	GO:0009507: chloroplast	2.29E-45
6	GO:0009570: chloroplast stroma	5.37E-34
7	GO:0009941: chloroplast envelope	1.23E-22
8	GO:0009535: chloroplast thylakoid membrane	4.07E-21
9	GO:0009579: thylakoid	2.72E-15
10	GO:0009534: chloroplast thylakoid	7.15E-14
11	GO:0005840: ribosome	1.18E-08
12	GO:0009543: chloroplast thylakoid lumen	4.20E-07
13	GO:0031977: thylakoid lumen	7.73E-07
14	GO:0031969: chloroplast membrane	8.95E-05
15	GO:0009547: plastid ribosome	1.30E-04
16	GO:0010007: magnesium chelatase complex	4.92E-04
17	GO:0005828: kinetochore microtubule	9.34E-04
18	GO:0000776: kinetochore	1.18E-03
19	GO:0010319: stromule	1.38E-03
20	GO:0000777: condensed chromosome kinetochore	1.73E-03
21	GO:0048046: apoplast	1.90E-03
22	GO:0009536: plastid	2.84E-03
23	GO:0005763: mitochondrial small ribosomal subunit	3.04E-03
24	GO:0005876: spindle microtubule	3.41E-03
25	GO:0000311: plastid large ribosomal subunit	4.58E-03
26	GO:0032040: small-subunit processome	4.58E-03
27	GO:0030095: chloroplast photosystem II	5.44E-03
28	GO:0030076: light-harvesting complex	5.88E-03
29	GO:0009706: chloroplast inner membrane	6.22E-03
30	GO:0009654: photosystem II oxygen evolving complex	7.30E-03
31	GO:0015935: small ribosomal subunit	7.79E-03
32	GO:0015629: actin cytoskeleton	8.82E-03
33	GO:0022626: cytosolic ribosome	1.19E-02
34	GO:0019898: extrinsic component of membrane	1.22E-02
35	GO:0009707: chloroplast outer membrane	2.00E-02
36	GO:0022625: cytosolic large ribosomal subunit	2.18E-02
37	GO:0015934: large ribosomal subunit	2.22E-02
38	GO:0005856: cytoskeleton	3.08E-02