Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G63840

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
2GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
3GO:0046865: terpenoid transport0.00E+00
4GO:0010324: membrane invagination0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0010055: atrichoblast differentiation0.00E+00
7GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
8GO:1902001: fatty acid transmembrane transport0.00E+00
9GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
10GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
11GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
12GO:0009312: oligosaccharide biosynthetic process0.00E+00
13GO:0015690: aluminum cation transport0.00E+00
14GO:1900367: positive regulation of defense response to insect0.00E+00
15GO:0051707: response to other organism1.45E-07
16GO:0009751: response to salicylic acid2.48E-07
17GO:0071456: cellular response to hypoxia3.83E-06
18GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.78E-05
19GO:0006952: defense response4.45E-05
20GO:0010112: regulation of systemic acquired resistance9.51E-05
21GO:0042742: defense response to bacterium1.18E-04
22GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.24E-04
23GO:0045227: capsule polysaccharide biosynthetic process2.09E-04
24GO:0033358: UDP-L-arabinose biosynthetic process2.09E-04
25GO:0009636: response to toxic substance3.00E-04
26GO:0002237: response to molecule of bacterial origin3.35E-04
27GO:0006979: response to oxidative stress3.90E-04
28GO:0009643: photosynthetic acclimation4.39E-04
29GO:0009611: response to wounding4.87E-04
30GO:0010150: leaf senescence5.08E-04
31GO:0009737: response to abscisic acid6.13E-04
32GO:0033306: phytol metabolic process6.43E-04
33GO:0009700: indole phytoalexin biosynthetic process6.43E-04
34GO:0050691: regulation of defense response to virus by host6.43E-04
35GO:0032491: detection of molecule of fungal origin6.43E-04
36GO:0009968: negative regulation of signal transduction6.43E-04
37GO:1990542: mitochondrial transmembrane transport6.43E-04
38GO:0032107: regulation of response to nutrient levels6.43E-04
39GO:1902600: hydrogen ion transmembrane transport6.43E-04
40GO:0048508: embryonic meristem development6.43E-04
41GO:0015760: glucose-6-phosphate transport6.43E-04
42GO:0046256: 2,4,6-trinitrotoluene catabolic process6.43E-04
43GO:0043547: positive regulation of GTPase activity6.43E-04
44GO:1990641: response to iron ion starvation6.43E-04
45GO:0019567: arabinose biosynthetic process6.43E-04
46GO:1901183: positive regulation of camalexin biosynthetic process6.43E-04
47GO:0006470: protein dephosphorylation6.67E-04
48GO:0031348: negative regulation of defense response7.50E-04
49GO:0009625: response to insect8.38E-04
50GO:0006012: galactose metabolic process8.38E-04
51GO:0010120: camalexin biosynthetic process1.13E-03
52GO:0010204: defense response signaling pathway, resistance gene-independent1.13E-03
53GO:2000031: regulation of salicylic acid mediated signaling pathway1.13E-03
54GO:0042391: regulation of membrane potential1.14E-03
55GO:0010271: regulation of chlorophyll catabolic process1.38E-03
56GO:0015908: fatty acid transport1.38E-03
57GO:0002240: response to molecule of oomycetes origin1.38E-03
58GO:0044419: interspecies interaction between organisms1.38E-03
59GO:0019725: cellular homeostasis1.38E-03
60GO:0009945: radial axis specification1.38E-03
61GO:0015012: heparan sulfate proteoglycan biosynthetic process1.38E-03
62GO:0015712: hexose phosphate transport1.38E-03
63GO:0071668: plant-type cell wall assembly1.38E-03
64GO:0051258: protein polymerization1.38E-03
65GO:0080183: response to photooxidative stress1.38E-03
66GO:0015914: phospholipid transport1.38E-03
67GO:0010155: regulation of proton transport1.38E-03
68GO:0009838: abscission1.38E-03
69GO:0010618: aerenchyma formation1.38E-03
70GO:0080181: lateral root branching1.38E-03
71GO:0006024: glycosaminoglycan biosynthetic process1.38E-03
72GO:0055088: lipid homeostasis1.38E-03
73GO:0010115: regulation of abscisic acid biosynthetic process1.38E-03
74GO:0006101: citrate metabolic process1.38E-03
75GO:0015865: purine nucleotide transport1.38E-03
76GO:0009753: response to jasmonic acid1.42E-03
77GO:0009749: response to glucose1.50E-03
78GO:1900426: positive regulation of defense response to bacterium1.59E-03
79GO:0010193: response to ozone1.64E-03
80GO:0010200: response to chitin2.00E-03
81GO:0034051: negative regulation of plant-type hypersensitive response2.28E-03
82GO:0010498: proteasomal protein catabolic process2.28E-03
83GO:0035436: triose phosphate transmembrane transport2.28E-03
84GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway2.28E-03
85GO:0080163: regulation of protein serine/threonine phosphatase activity2.28E-03
86GO:0006065: UDP-glucuronate biosynthetic process2.28E-03
87GO:0015783: GDP-fucose transport2.28E-03
88GO:0015692: lead ion transport2.28E-03
89GO:0052546: cell wall pectin metabolic process2.28E-03
90GO:0015714: phosphoenolpyruvate transport2.28E-03
91GO:0080168: abscisic acid transport2.28E-03
92GO:0015695: organic cation transport2.28E-03
93GO:1900055: regulation of leaf senescence2.28E-03
94GO:0006954: inflammatory response2.28E-03
95GO:0007166: cell surface receptor signaling pathway2.66E-03
96GO:0009617: response to bacterium2.88E-03
97GO:0015696: ammonium transport3.31E-03
98GO:0072583: clathrin-dependent endocytosis3.31E-03
99GO:0051289: protein homotetramerization3.31E-03
100GO:0010116: positive regulation of abscisic acid biosynthetic process3.31E-03
101GO:0046902: regulation of mitochondrial membrane permeability3.31E-03
102GO:0010731: protein glutathionylation3.31E-03
103GO:0009225: nucleotide-sugar metabolic process3.57E-03
104GO:0050832: defense response to fungus4.19E-03
105GO:0009407: toxin catabolic process4.20E-03
106GO:0009863: salicylic acid mediated signaling pathway4.43E-03
107GO:2000377: regulation of reactive oxygen species metabolic process4.43E-03
108GO:0080147: root hair cell development4.43E-03
109GO:0015713: phosphoglycerate transport4.47E-03
110GO:0080142: regulation of salicylic acid biosynthetic process4.47E-03
111GO:1901141: regulation of lignin biosynthetic process4.47E-03
112GO:0010109: regulation of photosynthesis4.47E-03
113GO:0060548: negative regulation of cell death4.47E-03
114GO:0072488: ammonium transmembrane transport4.47E-03
115GO:0009867: jasmonic acid mediated signaling pathway5.02E-03
116GO:0006468: protein phosphorylation5.08E-03
117GO:0034052: positive regulation of plant-type hypersensitive response5.75E-03
118GO:0006097: glyoxylate cycle5.75E-03
119GO:0009229: thiamine diphosphate biosynthetic process5.75E-03
120GO:0018344: protein geranylgeranylation5.75E-03
121GO:0010225: response to UV-C5.75E-03
122GO:0006887: exocytosis6.27E-03
123GO:0033365: protein localization to organelle7.13E-03
124GO:0010337: regulation of salicylic acid metabolic process7.13E-03
125GO:0006574: valine catabolic process7.13E-03
126GO:0002238: response to molecule of fungal origin7.13E-03
127GO:0009228: thiamine biosynthetic process7.13E-03
128GO:0009759: indole glucosinolate biosynthetic process7.13E-03
129GO:0010942: positive regulation of cell death7.13E-03
130GO:0010256: endomembrane system organization7.13E-03
131GO:0009414: response to water deprivation7.21E-03
132GO:0007165: signal transduction7.97E-03
133GO:0006855: drug transmembrane transport8.48E-03
134GO:0009942: longitudinal axis specification8.62E-03
135GO:0031930: mitochondria-nucleus signaling pathway8.62E-03
136GO:0010310: regulation of hydrogen peroxide metabolic process8.62E-03
137GO:0071470: cellular response to osmotic stress8.62E-03
138GO:0042372: phylloquinone biosynthetic process8.62E-03
139GO:0045926: negative regulation of growth8.62E-03
140GO:0031347: regulation of defense response8.89E-03
141GO:1900057: positive regulation of leaf senescence1.02E-02
142GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.02E-02
143GO:0050829: defense response to Gram-negative bacterium1.02E-02
144GO:1902074: response to salt1.02E-02
145GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.02E-02
146GO:0046470: phosphatidylcholine metabolic process1.02E-02
147GO:0043090: amino acid import1.02E-02
148GO:0071446: cellular response to salicylic acid stimulus1.02E-02
149GO:1900056: negative regulation of leaf senescence1.02E-02
150GO:0007264: small GTPase mediated signal transduction1.18E-02
151GO:0009787: regulation of abscisic acid-activated signaling pathway1.19E-02
152GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.19E-02
153GO:0009819: drought recovery1.19E-02
154GO:0009850: auxin metabolic process1.19E-02
155GO:0043068: positive regulation of programmed cell death1.19E-02
156GO:0031540: regulation of anthocyanin biosynthetic process1.19E-02
157GO:0006102: isocitrate metabolic process1.19E-02
158GO:0010928: regulation of auxin mediated signaling pathway1.19E-02
159GO:0009408: response to heat1.31E-02
160GO:0006997: nucleus organization1.37E-02
161GO:0009626: plant-type hypersensitive response1.37E-02
162GO:0010208: pollen wall assembly1.37E-02
163GO:0006904: vesicle docking involved in exocytosis1.42E-02
164GO:0009620: response to fungus1.43E-02
165GO:0046916: cellular transition metal ion homeostasis1.56E-02
166GO:0019432: triglyceride biosynthetic process1.56E-02
167GO:0015780: nucleotide-sugar transport1.56E-02
168GO:0007338: single fertilization1.56E-02
169GO:0006098: pentose-phosphate shunt1.56E-02
170GO:0010029: regulation of seed germination1.69E-02
171GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.69E-02
172GO:0010380: regulation of chlorophyll biosynthetic process1.76E-02
173GO:0008202: steroid metabolic process1.76E-02
174GO:0043067: regulation of programmed cell death1.76E-02
175GO:0009627: systemic acquired resistance1.79E-02
176GO:0009870: defense response signaling pathway, resistance gene-dependent1.96E-02
177GO:0006032: chitin catabolic process1.96E-02
178GO:0010629: negative regulation of gene expression1.96E-02
179GO:0051555: flavonol biosynthetic process1.96E-02
180GO:0009684: indoleacetic acid biosynthetic process2.17E-02
181GO:0019684: photosynthesis, light reaction2.17E-02
182GO:0009089: lysine biosynthetic process via diaminopimelate2.17E-02
183GO:0080167: response to karrikin2.25E-02
184GO:0006499: N-terminal protein myristoylation2.31E-02
185GO:0002213: defense response to insect2.39E-02
186GO:0010105: negative regulation of ethylene-activated signaling pathway2.39E-02
187GO:0045037: protein import into chloroplast stroma2.39E-02
188GO:0000266: mitochondrial fission2.39E-02
189GO:0012501: programmed cell death2.39E-02
190GO:0007568: aging2.42E-02
191GO:0010119: regulation of stomatal movement2.42E-02
192GO:2000028: regulation of photoperiodism, flowering2.62E-02
193GO:0018107: peptidyl-threonine phosphorylation2.62E-02
194GO:0055046: microgametogenesis2.62E-02
195GO:0006829: zinc II ion transport2.62E-02
196GO:0007034: vacuolar transport2.86E-02
197GO:0009266: response to temperature stimulus2.86E-02
198GO:0034605: cellular response to heat2.86E-02
199GO:0010167: response to nitrate3.10E-02
200GO:0046688: response to copper ion3.10E-02
201GO:0006897: endocytosis3.16E-02
202GO:0015031: protein transport3.17E-02
203GO:0009738: abscisic acid-activated signaling pathway3.28E-02
204GO:0000162: tryptophan biosynthetic process3.35E-02
205GO:0000027: ribosomal large subunit assembly3.61E-02
206GO:0006289: nucleotide-excision repair3.61E-02
207GO:0045333: cellular respiration3.61E-02
208GO:0006825: copper ion transport3.87E-02
209GO:0016998: cell wall macromolecule catabolic process4.14E-02
210GO:0006334: nucleosome assembly4.14E-02
211GO:0009269: response to desiccation4.14E-02
212GO:0006812: cation transport4.29E-02
213GO:2000022: regulation of jasmonic acid mediated signaling pathway4.41E-02
214GO:0009814: defense response, incompatible interaction4.41E-02
215GO:0010017: red or far-red light signaling pathway4.41E-02
216GO:0008152: metabolic process4.59E-02
217GO:0006486: protein glycosylation4.60E-02
218GO:0006813: potassium ion transport4.60E-02
219GO:0010224: response to UV-B4.76E-02
220GO:0042127: regulation of cell proliferation4.98E-02
221GO:0009561: megagametogenesis4.98E-02
RankGO TermAdjusted P value
1GO:0050334: thiaminase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
4GO:0005212: structural constituent of eye lens0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
7GO:0003978: UDP-glucose 4-epimerase activity2.26E-05
8GO:0050373: UDP-arabinose 4-epimerase activity2.09E-04
9GO:0030552: cAMP binding3.92E-04
10GO:0030553: cGMP binding3.92E-04
11GO:0005216: ion channel activity5.91E-04
12GO:0019707: protein-cysteine S-acyltransferase activity6.43E-04
13GO:2001147: camalexin binding6.43E-04
14GO:0015245: fatty acid transporter activity6.43E-04
15GO:0010285: L,L-diaminopimelate aminotransferase activity6.43E-04
16GO:0032050: clathrin heavy chain binding6.43E-04
17GO:2001227: quercitrin binding6.43E-04
18GO:0004662: CAAX-protein geranylgeranyltransferase activity6.43E-04
19GO:0043295: glutathione binding7.45E-04
20GO:0047893: flavonol 3-O-glucosyltransferase activity9.25E-04
21GO:0005249: voltage-gated potassium channel activity1.14E-03
22GO:0030551: cyclic nucleotide binding1.14E-03
23GO:0016301: kinase activity1.23E-03
24GO:0015036: disulfide oxidoreductase activity1.38E-03
25GO:0050736: O-malonyltransferase activity1.38E-03
26GO:0048531: beta-1,3-galactosyltransferase activity1.38E-03
27GO:0047364: desulfoglucosinolate sulfotransferase activity1.38E-03
28GO:0003994: aconitate hydratase activity1.38E-03
29GO:0015152: glucose-6-phosphate transmembrane transporter activity1.38E-03
30GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.38E-03
31GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.38E-03
32GO:0032934: sterol binding1.38E-03
33GO:0019901: protein kinase binding1.50E-03
34GO:0004568: chitinase activity1.86E-03
35GO:0008559: xenobiotic-transporting ATPase activity2.16E-03
36GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.27E-03
37GO:0032403: protein complex binding2.28E-03
38GO:0071917: triose-phosphate transmembrane transporter activity2.28E-03
39GO:0005457: GDP-fucose transmembrane transporter activity2.28E-03
40GO:0003979: UDP-glucose 6-dehydrogenase activity2.28E-03
41GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity2.28E-03
42GO:0004324: ferredoxin-NADP+ reductase activity2.28E-03
43GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity2.28E-03
44GO:0016531: copper chaperone activity2.28E-03
45GO:0043565: sequence-specific DNA binding2.38E-03
46GO:0008375: acetylglucosaminyltransferase activity3.03E-03
47GO:0004722: protein serine/threonine phosphatase activity3.22E-03
48GO:0022890: inorganic cation transmembrane transporter activity3.31E-03
49GO:0010178: IAA-amino acid conjugate hydrolase activity3.31E-03
50GO:0017077: oxidative phosphorylation uncoupler activity3.31E-03
51GO:0035529: NADH pyrophosphatase activity3.31E-03
52GO:0001046: core promoter sequence-specific DNA binding4.43E-03
53GO:0009916: alternative oxidase activity4.47E-03
54GO:0004930: G-protein coupled receptor activity4.47E-03
55GO:0015120: phosphoglycerate transmembrane transporter activity4.47E-03
56GO:0004834: tryptophan synthase activity4.47E-03
57GO:0004737: pyruvate decarboxylase activity4.47E-03
58GO:0016758: transferase activity, transferring hexosyl groups4.93E-03
59GO:0035251: UDP-glucosyltransferase activity5.38E-03
60GO:0005496: steroid binding5.75E-03
61GO:0047631: ADP-ribose diphosphatase activity5.75E-03
62GO:0005471: ATP:ADP antiporter activity5.75E-03
63GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.75E-03
64GO:0005509: calcium ion binding6.31E-03
65GO:0016757: transferase activity, transferring glycosyl groups6.32E-03
66GO:0004364: glutathione transferase activity6.61E-03
67GO:0004499: N,N-dimethylaniline monooxygenase activity7.01E-03
68GO:0008519: ammonium transmembrane transporter activity7.13E-03
69GO:0030976: thiamine pyrophosphate binding7.13E-03
70GO:0000210: NAD+ diphosphatase activity7.13E-03
71GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.56E-03
72GO:0015297: antiporter activity7.84E-03
73GO:0102391: decanoate--CoA ligase activity8.62E-03
74GO:0004144: diacylglycerol O-acyltransferase activity8.62E-03
75GO:0005261: cation channel activity8.62E-03
76GO:0004656: procollagen-proline 4-dioxygenase activity8.62E-03
77GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity8.62E-03
78GO:0051287: NAD binding8.89E-03
79GO:0004674: protein serine/threonine kinase activity9.24E-03
80GO:0015299: solute:proton antiporter activity9.56E-03
81GO:0008194: UDP-glycosyltransferase activity9.99E-03
82GO:0004467: long-chain fatty acid-CoA ligase activity1.02E-02
83GO:0016831: carboxy-lyase activity1.02E-02
84GO:0102425: myricetin 3-O-glucosyltransferase activity1.02E-02
85GO:0102360: daphnetin 3-O-glucosyltransferase activity1.02E-02
86GO:0004033: aldo-keto reductase (NADP) activity1.19E-02
87GO:0004708: MAP kinase kinase activity1.19E-02
88GO:0004714: transmembrane receptor protein tyrosine kinase activity1.19E-02
89GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.21E-02
90GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.37E-02
91GO:0008142: oxysterol binding1.37E-02
92GO:0004630: phospholipase D activity1.37E-02
93GO:0008483: transaminase activity1.42E-02
94GO:0080043: quercetin 3-O-glucosyltransferase activity1.43E-02
95GO:0080044: quercetin 7-O-glucosyltransferase activity1.43E-02
96GO:0047617: acyl-CoA hydrolase activity1.76E-02
97GO:0016740: transferase activity1.83E-02
98GO:0004806: triglyceride lipase activity1.89E-02
99GO:0004864: protein phosphatase inhibitor activity1.96E-02
100GO:0004713: protein tyrosine kinase activity1.96E-02
101GO:0015020: glucuronosyltransferase activity1.96E-02
102GO:0015386: potassium:proton antiporter activity2.17E-02
103GO:0005543: phospholipid binding2.17E-02
104GO:0015238: drug transmembrane transporter activity2.20E-02
105GO:0005507: copper ion binding2.45E-02
106GO:0005315: inorganic phosphate transmembrane transporter activity2.62E-02
107GO:0005516: calmodulin binding2.72E-02
108GO:0050661: NADP binding3.03E-02
109GO:0008146: sulfotransferase activity3.10E-02
110GO:0003712: transcription cofactor activity3.10E-02
111GO:0031418: L-ascorbic acid binding3.61E-02
112GO:0003954: NADH dehydrogenase activity3.61E-02
113GO:0008324: cation transmembrane transporter activity3.87E-02
114GO:0015079: potassium ion transmembrane transporter activity3.87E-02
115GO:0033612: receptor serine/threonine kinase binding4.14E-02
116GO:0019706: protein-cysteine S-palmitoyltransferase activity4.14E-02
117GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.41E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane7.15E-09
2GO:0005886: plasma membrane9.60E-07
3GO:0005794: Golgi apparatus2.30E-04
4GO:0000813: ESCRT I complex3.15E-04
5GO:0000164: protein phosphatase type 1 complex3.15E-04
6GO:0005953: CAAX-protein geranylgeranyltransferase complex6.43E-04
7GO:0000138: Golgi trans cisterna6.43E-04
8GO:0031314: extrinsic component of mitochondrial inner membrane1.38E-03
9GO:0005901: caveola1.38E-03
10GO:0031304: intrinsic component of mitochondrial inner membrane1.38E-03
11GO:0008287: protein serine/threonine phosphatase complex2.28E-03
12GO:0030139: endocytic vesicle2.28E-03
13GO:0009530: primary cell wall2.28E-03
14GO:0030658: transport vesicle membrane3.31E-03
15GO:0070062: extracellular exosome3.31E-03
16GO:0043231: intracellular membrane-bounded organelle4.93E-03
17GO:0005743: mitochondrial inner membrane1.16E-02
18GO:0000145: exocyst1.18E-02
19GO:0005802: trans-Golgi network1.19E-02
20GO:0032580: Golgi cisterna membrane1.34E-02
21GO:0005774: vacuolar membrane1.43E-02
22GO:0005768: endosome1.56E-02
23GO:0030125: clathrin vesicle coat1.96E-02
24GO:0005740: mitochondrial envelope1.96E-02
25GO:0005789: endoplasmic reticulum membrane2.02E-02
26GO:0000325: plant-type vacuole2.42E-02
27GO:0016020: membrane3.03E-02
28GO:0005795: Golgi stack3.10E-02
29GO:0031902: late endosome membrane3.16E-02
30GO:0005769: early endosome3.35E-02
31GO:0005758: mitochondrial intermembrane space3.61E-02
32GO:0070469: respiratory chain3.87E-02
33GO:0005741: mitochondrial outer membrane4.14E-02
34GO:0005777: peroxisome4.35E-02
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Gene type



Gene DE type