co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G63690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010203: response to very low fluence red light stimulus	0.00E+00
2	GO:0042547: cell wall modification involved in multidimensional cell growth	3.00E-05
3	GO:0015798: myo-inositol transport	3.00E-05
4	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	3.00E-05
5	GO:0043087: regulation of GTPase activity	3.00E-05
6	GO:0048508: embryonic meristem development	3.00E-05
7	GO:0015969: guanosine tetraphosphate metabolic process	3.00E-05
8	GO:0090351: seedling development	4.64E-05
9	GO:0000256: allantoin catabolic process	7.58E-05
10	GO:0009945: radial axis specification	7.58E-05
11	GO:0006435: threonyl-tRNA aminoacylation	7.58E-05
12	GO:0043255: regulation of carbohydrate biosynthetic process	7.58E-05
13	GO:2000082: regulation of L-ascorbic acid biosynthetic process	1.32E-04
14	GO:0010136: ureide catabolic process	1.32E-04
15	GO:0017006: protein-tetrapyrrole linkage	1.32E-04
16	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.97E-04
17	GO:0009584: detection of visible light	1.97E-04
18	GO:0006145: purine nucleobase catabolic process	1.97E-04
19	GO:0071483: cellular response to blue light	2.67E-04
20	GO:0051322: anaphase	2.67E-04
21	GO:0006552: leucine catabolic process	2.67E-04
22	GO:0050665: hydrogen peroxide biosynthetic process	4.20E-04
23	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.20E-04
24	GO:0009854: oxidative photosynthetic carbon pathway	5.02E-04
25	GO:0009612: response to mechanical stimulus	5.02E-04
26	GO:0017148: negative regulation of translation	5.02E-04
27	GO:0009942: longitudinal axis specification	5.02E-04
28	GO:0022904: respiratory electron transport chain	5.88E-04
29	GO:0010161: red light signaling pathway	5.88E-04
30	GO:0009645: response to low light intensity stimulus	5.88E-04
31	GO:0009585: red, far-red light phototransduction	6.82E-04
32	GO:0009808: lignin metabolic process	7.68E-04
33	GO:0009932: cell tip growth	7.68E-04
34	GO:0071482: cellular response to light stimulus	7.68E-04
35	GO:0046685: response to arsenic-containing substance	8.63E-04
36	GO:0009821: alkaloid biosynthetic process	8.63E-04
37	GO:0090305: nucleic acid phosphodiester bond hydrolysis	8.63E-04
38	GO:0009638: phototropism	9.61E-04
39	GO:0045036: protein targeting to chloroplast	1.06E-03
40	GO:0006352: DNA-templated transcription, initiation	1.16E-03
41	GO:0000272: polysaccharide catabolic process	1.16E-03
42	GO:0009058: biosynthetic process	1.24E-03
43	GO:0010152: pollen maturation	1.27E-03
44	GO:0009767: photosynthetic electron transport chain	1.38E-03
45	GO:0009833: plant-type primary cell wall biogenesis	1.73E-03
46	GO:0006833: water transport	1.73E-03
47	GO:0010073: meristem maintenance	1.98E-03
48	GO:0006825: copper ion transport	1.98E-03
49	GO:0051260: protein homooligomerization	2.11E-03
50	GO:0048511: rhythmic process	2.11E-03
51	GO:0006730: one-carbon metabolic process	2.25E-03
52	GO:0009814: defense response, incompatible interaction	2.25E-03
53	GO:0055114: oxidation-reduction process	2.58E-03
54	GO:0071555: cell wall organization	2.66E-03
55	GO:0034220: ion transmembrane transport	2.80E-03
56	GO:0048653: anther development	2.80E-03
57	GO:0007018: microtubule-based movement	3.09E-03
58	GO:0009646: response to absence of light	3.09E-03
59	GO:0071554: cell wall organization or biogenesis	3.40E-03
60	GO:0009630: gravitropism	3.55E-03
61	GO:0000910: cytokinesis	4.20E-03
62	GO:0016126: sterol biosynthetic process	4.36E-03
63	GO:0010411: xyloglucan metabolic process	4.88E-03
64	GO:0018298: protein-chromophore linkage	5.23E-03
65	GO:0030244: cellulose biosynthetic process	5.23E-03
66	GO:0010218: response to far red light	5.60E-03
67	GO:0009834: plant-type secondary cell wall biogenesis	5.60E-03
68	GO:0009853: photorespiration	6.16E-03
69	GO:0009640: photomorphogenesis	7.34E-03
70	GO:0042546: cell wall biogenesis	7.54E-03
71	GO:0009664: plant-type cell wall organization	8.60E-03
72	GO:0009846: pollen germination	8.60E-03
73	GO:0009809: lignin biosynthetic process	9.03E-03
74	GO:0055085: transmembrane transport	1.00E-02
75	GO:0042744: hydrogen peroxide catabolic process	1.49E-02
76	GO:0009414: response to water deprivation	1.57E-02
77	GO:0045490: pectin catabolic process	1.70E-02
78	GO:0009826: unidimensional cell growth	2.26E-02
79	GO:0009658: chloroplast organization	2.32E-02
80	GO:0042254: ribosome biogenesis	2.36E-02
81	GO:0006810: transport	2.36E-02
82	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.78E-02
83	GO:0046777: protein autophosphorylation	2.84E-02
84	GO:0009793: embryo development ending in seed dormancy	3.72E-02
85	GO:0009753: response to jasmonic acid	3.76E-02
86	GO:0006508: proteolysis	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
2	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
3	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
4	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
5	GO:0048039: ubiquinone binding	0.00E+00
6	GO:0031516: far-red light photoreceptor activity	3.00E-05
7	GO:0004008: copper-exporting ATPase activity	3.00E-05
8	GO:0008728: GTP diphosphokinase activity	7.58E-05
9	GO:0005366: myo-inositol:proton symporter activity	7.58E-05
10	GO:0009883: red or far-red light photoreceptor activity	7.58E-05
11	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	7.58E-05
12	GO:0004829: threonine-tRNA ligase activity	7.58E-05
13	GO:0008020: G-protein coupled photoreceptor activity	1.32E-04
14	GO:0004180: carboxypeptidase activity	1.32E-04
15	GO:0010277: chlorophyllide a oxygenase [overall] activity	1.32E-04
16	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	1.97E-04
17	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	1.97E-04
18	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	1.97E-04
19	GO:0008891: glycolate oxidase activity	2.67E-04
20	GO:0001053: plastid sigma factor activity	2.67E-04
21	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.67E-04
22	GO:0016987: sigma factor activity	2.67E-04
23	GO:0004506: squalene monooxygenase activity	2.67E-04
24	GO:0016161: beta-amylase activity	5.02E-04
25	GO:0009927: histidine phosphotransfer kinase activity	5.02E-04
26	GO:0005375: copper ion transmembrane transporter activity	7.68E-04
27	GO:0016844: strictosidine synthase activity	9.61E-04
28	GO:0004673: protein histidine kinase activity	1.06E-03
29	GO:0000155: phosphorelay sensor kinase activity	1.38E-03
30	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.38E-03
31	GO:0008017: microtubule binding	1.68E-03
32	GO:0042802: identical protein binding	2.03E-03
33	GO:0016779: nucleotidyltransferase activity	2.25E-03
34	GO:0016760: cellulose synthase (UDP-forming) activity	2.38E-03
35	GO:0030570: pectate lyase activity	2.38E-03
36	GO:0010181: FMN binding	3.09E-03
37	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.40E-03
38	GO:0048038: quinone binding	3.40E-03
39	GO:0004518: nuclease activity	3.55E-03
40	GO:0046872: metal ion binding	3.79E-03
41	GO:0042803: protein homodimerization activity	3.81E-03
42	GO:0004871: signal transducer activity	3.81E-03
43	GO:0016759: cellulose synthase activity	3.87E-03
44	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.03E-03
45	GO:0016413: O-acetyltransferase activity	4.20E-03
46	GO:0015250: water channel activity	4.36E-03
47	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.88E-03
48	GO:0008236: serine-type peptidase activity	5.05E-03
49	GO:0005096: GTPase activator activity	5.41E-03
50	GO:0051539: 4 iron, 4 sulfur cluster binding	6.74E-03
51	GO:0051537: 2 iron, 2 sulfur cluster binding	7.75E-03
52	GO:0035091: phosphatidylinositol binding	7.75E-03
53	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	9.03E-03
54	GO:0003777: microtubule motor activity	9.70E-03
55	GO:0016829: lyase activity	1.43E-02
56	GO:0015144: carbohydrate transmembrane transporter activity	1.54E-02
57	GO:0005351: sugar:proton symporter activity	1.68E-02
58	GO:0016491: oxidoreductase activity	2.12E-02
59	GO:0004601: peroxidase activity	2.32E-02
60	GO:0004672: protein kinase activity	2.36E-02
61	GO:0016788: hydrolase activity, acting on ester bonds	2.36E-02
62	GO:0003729: mRNA binding	2.40E-02
63	GO:0050660: flavin adenine dinucleotide binding	2.58E-02
64	GO:0052689: carboxylic ester hydrolase activity	2.91E-02
65	GO:0009055: electron carrier activity	3.76E-02
66	GO:0005515: protein binding	3.98E-02
67	GO:0016887: ATPase activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0009574: preprophase band	3.49E-05
3	GO:0046658: anchored component of plasma membrane	2.01E-04
4	GO:0031305: integral component of mitochondrial inner membrane	6.76E-04
5	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	8.63E-04
6	GO:0016604: nuclear body	9.61E-04
7	GO:0005740: mitochondrial envelope	1.06E-03
8	GO:0005773: vacuole	1.19E-03
9	GO:0031225: anchored component of membrane	1.91E-03
10	GO:0005871: kinesin complex	2.66E-03
11	GO:0005874: microtubule	2.94E-03
12	GO:0048046: apoplast	2.96E-03
13	GO:0009505: plant-type cell wall	3.54E-03
14	GO:0009506: plasmodesma	5.90E-03
15	GO:0005887: integral component of plasma membrane	6.06E-03
16	GO:0005777: peroxisome	9.08E-03
17	GO:0009507: chloroplast	9.71E-03
18	GO:0016607: nuclear speck	1.04E-02
19	GO:0005834: heterotrimeric G-protein complex	1.06E-02
20	GO:0009706: chloroplast inner membrane	1.16E-02
21	GO:0009524: phragmoplast	1.41E-02
22	GO:0005618: cell wall	1.52E-02
23	GO:0005759: mitochondrial matrix	1.59E-02
24	GO:0009705: plant-type vacuole membrane	1.70E-02
25	GO:0009536: plastid	1.97E-02
26	GO:0016020: membrane	2.39E-02
27	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.48E-02
28	GO:0005783: endoplasmic reticulum	3.10E-02
29	GO:0009535: chloroplast thylakoid membrane	3.60E-02