GO Enrichment Analysis of Co-expressed Genes with
AT1G62640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 2 | GO:0090355: positive regulation of auxin metabolic process | 0.00E+00 |
| 3 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 4 | GO:0090358: positive regulation of tryptophan metabolic process | 0.00E+00 |
| 5 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 6 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 7 | GO:0009451: RNA modification | 2.66E-06 |
| 8 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.56E-04 |
| 9 | GO:0051171: regulation of nitrogen compound metabolic process | 1.56E-04 |
| 10 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.56E-04 |
| 11 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 1.56E-04 |
| 12 | GO:0043971: histone H3-K18 acetylation | 1.56E-04 |
| 13 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 3.55E-04 |
| 14 | GO:0071705: nitrogen compound transport | 5.82E-04 |
| 15 | GO:0042780: tRNA 3'-end processing | 5.82E-04 |
| 16 | GO:0045493: xylan catabolic process | 5.82E-04 |
| 17 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 5.82E-04 |
| 18 | GO:0006013: mannose metabolic process | 5.82E-04 |
| 19 | GO:0009800: cinnamic acid biosynthetic process | 8.33E-04 |
| 20 | GO:0010306: rhamnogalacturonan II biosynthetic process | 8.33E-04 |
| 21 | GO:0010255: glucose mediated signaling pathway | 8.33E-04 |
| 22 | GO:0009102: biotin biosynthetic process | 8.33E-04 |
| 23 | GO:0010239: chloroplast mRNA processing | 8.33E-04 |
| 24 | GO:0015846: polyamine transport | 1.10E-03 |
| 25 | GO:0071249: cellular response to nitrate | 1.10E-03 |
| 26 | GO:0048868: pollen tube development | 1.13E-03 |
| 27 | GO:0031365: N-terminal protein amino acid modification | 1.40E-03 |
| 28 | GO:0010315: auxin efflux | 1.72E-03 |
| 29 | GO:0006559: L-phenylalanine catabolic process | 1.72E-03 |
| 30 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.06E-03 |
| 31 | GO:0034389: lipid particle organization | 2.06E-03 |
| 32 | GO:0009610: response to symbiotic fungus | 2.42E-03 |
| 33 | GO:0006353: DNA-templated transcription, termination | 2.80E-03 |
| 34 | GO:0009834: plant-type secondary cell wall biogenesis | 2.85E-03 |
| 35 | GO:0032544: plastid translation | 3.21E-03 |
| 36 | GO:0044030: regulation of DNA methylation | 3.21E-03 |
| 37 | GO:0006002: fructose 6-phosphate metabolic process | 3.21E-03 |
| 38 | GO:0071482: cellular response to light stimulus | 3.21E-03 |
| 39 | GO:0009827: plant-type cell wall modification | 3.21E-03 |
| 40 | GO:0019432: triglyceride biosynthetic process | 3.63E-03 |
| 41 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.06E-03 |
| 42 | GO:0006535: cysteine biosynthetic process from serine | 4.52E-03 |
| 43 | GO:1903507: negative regulation of nucleic acid-templated transcription | 4.99E-03 |
| 44 | GO:0016485: protein processing | 4.99E-03 |
| 45 | GO:0015706: nitrate transport | 5.48E-03 |
| 46 | GO:0080188: RNA-directed DNA methylation | 7.04E-03 |
| 47 | GO:0010167: response to nitrate | 7.04E-03 |
| 48 | GO:0006071: glycerol metabolic process | 7.59E-03 |
| 49 | GO:0000162: tryptophan biosynthetic process | 7.59E-03 |
| 50 | GO:0010187: negative regulation of seed germination | 8.16E-03 |
| 51 | GO:0006289: nucleotide-excision repair | 8.16E-03 |
| 52 | GO:0019344: cysteine biosynthetic process | 8.16E-03 |
| 53 | GO:0030150: protein import into mitochondrial matrix | 8.16E-03 |
| 54 | GO:0010073: meristem maintenance | 8.74E-03 |
| 55 | GO:0006418: tRNA aminoacylation for protein translation | 8.74E-03 |
| 56 | GO:0015992: proton transport | 9.34E-03 |
| 57 | GO:0035428: hexose transmembrane transport | 9.96E-03 |
| 58 | GO:0016226: iron-sulfur cluster assembly | 9.96E-03 |
| 59 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 9.96E-03 |
| 60 | GO:0042127: regulation of cell proliferation | 1.12E-02 |
| 61 | GO:0016117: carotenoid biosynthetic process | 1.19E-02 |
| 62 | GO:0046323: glucose import | 1.32E-02 |
| 63 | GO:0045489: pectin biosynthetic process | 1.32E-02 |
| 64 | GO:0009793: embryo development ending in seed dormancy | 1.35E-02 |
| 65 | GO:0009851: auxin biosynthetic process | 1.46E-02 |
| 66 | GO:0080156: mitochondrial mRNA modification | 1.54E-02 |
| 67 | GO:0007264: small GTPase mediated signal transduction | 1.61E-02 |
| 68 | GO:0009416: response to light stimulus | 1.75E-02 |
| 69 | GO:0016126: sterol biosynthetic process | 1.99E-02 |
| 70 | GO:0006508: proteolysis | 2.19E-02 |
| 71 | GO:0010411: xyloglucan metabolic process | 2.24E-02 |
| 72 | GO:0048481: plant ovule development | 2.41E-02 |
| 73 | GO:0030244: cellulose biosynthetic process | 2.41E-02 |
| 74 | GO:0007568: aging | 2.67E-02 |
| 75 | GO:0009910: negative regulation of flower development | 2.67E-02 |
| 76 | GO:0051707: response to other organism | 3.42E-02 |
| 77 | GO:0009965: leaf morphogenesis | 3.71E-02 |
| 78 | GO:0031347: regulation of defense response | 3.91E-02 |
| 79 | GO:0006355: regulation of transcription, DNA-templated | 4.03E-02 |
| 80 | GO:0071555: cell wall organization | 4.22E-02 |
| 81 | GO:0006364: rRNA processing | 4.22E-02 |
| 82 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.33E-02 |
| 83 | GO:0008152: metabolic process | 4.36E-02 |
| 84 | GO:0006096: glycolytic process | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0019808: polyamine binding | 0.00E+00 |
| 3 | GO:0008710: 8-amino-7-oxononanoate synthase activity | 0.00E+00 |
| 4 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 5 | GO:0004519: endonuclease activity | 5.70E-05 |
| 6 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 1.56E-04 |
| 7 | GO:0004830: tryptophan-tRNA ligase activity | 1.56E-04 |
| 8 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 1.56E-04 |
| 9 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 1.56E-04 |
| 10 | GO:0050017: L-3-cyanoalanine synthase activity | 3.55E-04 |
| 11 | GO:0004047: aminomethyltransferase activity | 3.55E-04 |
| 12 | GO:0032549: ribonucleoside binding | 5.82E-04 |
| 13 | GO:0016805: dipeptidase activity | 5.82E-04 |
| 14 | GO:0045548: phenylalanine ammonia-lyase activity | 5.82E-04 |
| 15 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 5.82E-04 |
| 16 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 8.33E-04 |
| 17 | GO:0000254: C-4 methylsterol oxidase activity | 8.33E-04 |
| 18 | GO:0070628: proteasome binding | 1.10E-03 |
| 19 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.10E-03 |
| 20 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.10E-03 |
| 21 | GO:0010385: double-stranded methylated DNA binding | 1.10E-03 |
| 22 | GO:0031593: polyubiquitin binding | 1.72E-03 |
| 23 | GO:0008237: metallopeptidase activity | 1.78E-03 |
| 24 | GO:0004144: diacylglycerol O-acyltransferase activity | 2.06E-03 |
| 25 | GO:0004559: alpha-mannosidase activity | 2.06E-03 |
| 26 | GO:0004124: cysteine synthase activity | 2.06E-03 |
| 27 | GO:0019899: enzyme binding | 2.42E-03 |
| 28 | GO:0008235: metalloexopeptidase activity | 2.42E-03 |
| 29 | GO:0004427: inorganic diphosphatase activity | 2.42E-03 |
| 30 | GO:0003872: 6-phosphofructokinase activity | 2.42E-03 |
| 31 | GO:0015020: glucuronosyltransferase activity | 4.52E-03 |
| 32 | GO:0008327: methyl-CpG binding | 4.99E-03 |
| 33 | GO:0001054: RNA polymerase I activity | 4.99E-03 |
| 34 | GO:0004177: aminopeptidase activity | 4.99E-03 |
| 35 | GO:0015266: protein channel activity | 5.98E-03 |
| 36 | GO:0009982: pseudouridine synthase activity | 5.98E-03 |
| 37 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 6.21E-03 |
| 38 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.50E-03 |
| 39 | GO:0003723: RNA binding | 6.65E-03 |
| 40 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 7.36E-03 |
| 41 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 7.36E-03 |
| 42 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 7.59E-03 |
| 43 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 7.59E-03 |
| 44 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 7.59E-03 |
| 45 | GO:0003714: transcription corepressor activity | 8.16E-03 |
| 46 | GO:0043130: ubiquitin binding | 8.16E-03 |
| 47 | GO:0003924: GTPase activity | 8.46E-03 |
| 48 | GO:0004176: ATP-dependent peptidase activity | 9.34E-03 |
| 49 | GO:0019843: rRNA binding | 1.01E-02 |
| 50 | GO:0030170: pyridoxal phosphate binding | 1.12E-02 |
| 51 | GO:0004812: aminoacyl-tRNA ligase activity | 1.19E-02 |
| 52 | GO:0004402: histone acetyltransferase activity | 1.25E-02 |
| 53 | GO:0003676: nucleic acid binding | 1.29E-02 |
| 54 | GO:0001085: RNA polymerase II transcription factor binding | 1.32E-02 |
| 55 | GO:0010181: FMN binding | 1.39E-02 |
| 56 | GO:0005355: glucose transmembrane transporter activity | 1.39E-02 |
| 57 | GO:0019901: protein kinase binding | 1.46E-02 |
| 58 | GO:0008194: UDP-glycosyltransferase activity | 1.56E-02 |
| 59 | GO:0003684: damaged DNA binding | 1.76E-02 |
| 60 | GO:0008483: transaminase activity | 1.84E-02 |
| 61 | GO:0016413: O-acetyltransferase activity | 1.92E-02 |
| 62 | GO:0004806: triglyceride lipase activity | 2.24E-02 |
| 63 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.41E-02 |
| 64 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.58E-02 |
| 65 | GO:0004222: metalloendopeptidase activity | 2.58E-02 |
| 66 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.67E-02 |
| 67 | GO:0042393: histone binding | 3.13E-02 |
| 68 | GO:0005525: GTP binding | 3.27E-02 |
| 69 | GO:0004185: serine-type carboxypeptidase activity | 3.42E-02 |
| 70 | GO:0043621: protein self-association | 3.61E-02 |
| 71 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.22E-02 |
| 72 | GO:0003824: catalytic activity | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009537: proplastid | 0.00E+00 |
| 2 | GO:0042597: periplasmic space | 0.00E+00 |
| 3 | GO:0010370: perinucleolar chromocenter | 1.56E-04 |
| 4 | GO:0009513: etioplast | 3.55E-04 |
| 5 | GO:0009507: chloroplast | 5.53E-04 |
| 6 | GO:0009509: chromoplast | 5.82E-04 |
| 7 | GO:0009505: plant-type cell wall | 1.25E-03 |
| 8 | GO:0005945: 6-phosphofructokinase complex | 1.40E-03 |
| 9 | GO:0031305: integral component of mitochondrial inner membrane | 2.80E-03 |
| 10 | GO:0009501: amyloplast | 2.80E-03 |
| 11 | GO:0005811: lipid particle | 3.21E-03 |
| 12 | GO:0005720: nuclear heterochromatin | 3.63E-03 |
| 13 | GO:0005736: DNA-directed RNA polymerase I complex | 3.63E-03 |
| 14 | GO:0016602: CCAAT-binding factor complex | 5.98E-03 |
| 15 | GO:0005578: proteinaceous extracellular matrix | 5.98E-03 |
| 16 | GO:0043231: intracellular membrane-bounded organelle | 9.58E-03 |
| 17 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.12E-02 |
| 18 | GO:0005667: transcription factor complex | 2.16E-02 |
| 19 | GO:0005789: endoplasmic reticulum membrane | 2.24E-02 |
| 20 | GO:0005802: trans-Golgi network | 3.16E-02 |
| 21 | GO:0005856: cytoskeleton | 3.71E-02 |
| 22 | GO:0005768: endosome | 3.71E-02 |