co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G62305

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046865: terpenoid transport	0.00E+00
2	GO:0010324: membrane invagination	0.00E+00
3	GO:0071327: cellular response to trehalose stimulus	0.00E+00
4	GO:0010055: atrichoblast differentiation	0.00E+00
5	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
6	GO:1902001: fatty acid transmembrane transport	0.00E+00
7	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
8	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
9	GO:0015690: aluminum cation transport	0.00E+00
10	GO:1900367: positive regulation of defense response to insect	0.00E+00
11	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
12	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
13	GO:0032515: negative regulation of phosphoprotein phosphatase activity	0.00E+00
14	GO:0071456: cellular response to hypoxia	8.51E-07
15	GO:0009751: response to salicylic acid	1.17E-06
16	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	8.58E-06
17	GO:0010112: regulation of systemic acquired resistance	3.95E-05
18	GO:0042742: defense response to bacterium	4.75E-05
19	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.23E-05
20	GO:0051707: response to other organism	7.26E-05
21	GO:0009636: response to toxic substance	9.38E-05
22	GO:0045227: capsule polysaccharide biosynthetic process	1.12E-04
23	GO:0033358: UDP-L-arabinose biosynthetic process	1.12E-04
24	GO:0010150: leaf senescence	1.44E-04
25	GO:0009225: nucleotide-sugar metabolic process	1.80E-04
26	GO:0009737: response to abscisic acid	2.23E-04
27	GO:0009643: photosynthetic acclimation	2.46E-04
28	GO:0009753: response to jasmonic acid	3.91E-04
29	GO:0009625: response to insect	4.05E-04
30	GO:0006012: galactose metabolic process	4.05E-04
31	GO:0050691: regulation of defense response to virus by host	4.40E-04
32	GO:0009968: negative regulation of signal transduction	4.40E-04
33	GO:1990542: mitochondrial transmembrane transport	4.40E-04
34	GO:0032107: regulation of response to nutrient levels	4.40E-04
35	GO:1902600: hydrogen ion transmembrane transport	4.40E-04
36	GO:0048508: embryonic meristem development	4.40E-04
37	GO:0015760: glucose-6-phosphate transport	4.40E-04
38	GO:0046256: 2,4,6-trinitrotoluene catabolic process	4.40E-04
39	GO:0043547: positive regulation of GTPase activity	4.40E-04
40	GO:0019567: arabinose biosynthetic process	4.40E-04
41	GO:0033306: phytol metabolic process	4.40E-04
42	GO:0009700: indole phytoalexin biosynthetic process	4.40E-04
43	GO:1901183: positive regulation of camalexin biosynthetic process	4.40E-04
44	GO:0042391: regulation of membrane potential	5.54E-04
45	GO:0010200: response to chitin	6.35E-04
46	GO:2000031: regulation of salicylic acid mediated signaling pathway	6.48E-04
47	GO:0010120: camalexin biosynthetic process	6.48E-04
48	GO:0006979: response to oxidative stress	6.53E-04
49	GO:0009749: response to glucose	7.33E-04
50	GO:1900426: positive regulation of defense response to bacterium	9.15E-04
51	GO:0015712: hexose phosphate transport	9.50E-04
52	GO:0051258: protein polymerization	9.50E-04
53	GO:0010271: regulation of chlorophyll catabolic process	9.50E-04
54	GO:0071668: plant-type cell wall assembly	9.50E-04
55	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	9.50E-04
56	GO:0009838: abscission	9.50E-04
57	GO:0010618: aerenchyma formation	9.50E-04
58	GO:0080181: lateral root branching	9.50E-04
59	GO:0055088: lipid homeostasis	9.50E-04
60	GO:0015908: fatty acid transport	9.50E-04
61	GO:0010115: regulation of abscisic acid biosynthetic process	9.50E-04
62	GO:0044419: interspecies interaction between organisms	9.50E-04
63	GO:0015865: purine nucleotide transport	9.50E-04
64	GO:0009945: radial axis specification	9.50E-04
65	GO:0009617: response to bacterium	1.04E-03
66	GO:0009611: response to wounding	1.26E-03
67	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	1.55E-03
68	GO:0034051: negative regulation of plant-type hypersensitive response	1.55E-03
69	GO:0080163: regulation of protein serine/threonine phosphatase activity	1.55E-03
70	GO:0035436: triose phosphate transmembrane transport	1.55E-03
71	GO:0015783: GDP-fucose transport	1.55E-03
72	GO:0015692: lead ion transport	1.55E-03
73	GO:0015695: organic cation transport	1.55E-03
74	GO:0015714: phosphoenolpyruvate transport	1.55E-03
75	GO:0080168: abscisic acid transport	1.55E-03
76	GO:1900055: regulation of leaf senescence	1.55E-03
77	GO:0006954: inflammatory response	1.55E-03
78	GO:0002237: response to molecule of bacterial origin	1.80E-03
79	GO:0009407: toxin catabolic process	2.01E-03
80	GO:0006952: defense response	2.07E-03
81	GO:0015696: ammonium transport	2.24E-03
82	GO:0051289: protein homotetramerization	2.24E-03
83	GO:0010116: positive regulation of abscisic acid biosynthetic process	2.24E-03
84	GO:0006020: inositol metabolic process	2.24E-03
85	GO:0046902: regulation of mitochondrial membrane permeability	2.24E-03
86	GO:0010731: protein glutathionylation	2.24E-03
87	GO:2000377: regulation of reactive oxygen species metabolic process	2.49E-03
88	GO:0080147: root hair cell development	2.49E-03
89	GO:0015713: phosphoglycerate transport	3.01E-03
90	GO:0080142: regulation of salicylic acid biosynthetic process	3.01E-03
91	GO:1901141: regulation of lignin biosynthetic process	3.01E-03
92	GO:0010109: regulation of photosynthesis	3.01E-03
93	GO:0072488: ammonium transmembrane transport	3.01E-03
94	GO:0009269: response to desiccation	3.03E-03
95	GO:0010225: response to UV-C	3.85E-03
96	GO:0016094: polyprenol biosynthetic process	3.85E-03
97	GO:0034052: positive regulation of plant-type hypersensitive response	3.85E-03
98	GO:0031347: regulation of defense response	4.25E-03
99	GO:0050832: defense response to fungus	4.29E-03
100	GO:0033365: protein localization to organelle	4.77E-03
101	GO:0010337: regulation of salicylic acid metabolic process	4.77E-03
102	GO:0006574: valine catabolic process	4.77E-03
103	GO:0009759: indole glucosinolate biosynthetic process	4.77E-03
104	GO:0010942: positive regulation of cell death	4.77E-03
105	GO:0009414: response to water deprivation	5.34E-03
106	GO:0009942: longitudinal axis specification	5.75E-03
107	GO:0010310: regulation of hydrogen peroxide metabolic process	5.75E-03
108	GO:0071470: cellular response to osmotic stress	5.75E-03
109	GO:0042372: phylloquinone biosynthetic process	5.75E-03
110	GO:0045926: negative regulation of growth	5.75E-03
111	GO:0010193: response to ozone	6.14E-03
112	GO:0009626: plant-type hypersensitive response	6.55E-03
113	GO:0007264: small GTPase mediated signal transduction	6.56E-03
114	GO:1900057: positive regulation of leaf senescence	6.80E-03
115	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	6.80E-03
116	GO:0050829: defense response to Gram-negative bacterium	6.80E-03
117	GO:1902074: response to salt	6.80E-03
118	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.80E-03
119	GO:0043090: amino acid import	6.80E-03
120	GO:0071446: cellular response to salicylic acid stimulus	6.80E-03
121	GO:1900056: negative regulation of leaf senescence	6.80E-03
122	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	6.80E-03
123	GO:0043068: positive regulation of programmed cell death	7.91E-03
124	GO:0031540: regulation of anthocyanin biosynthetic process	7.91E-03
125	GO:0010928: regulation of auxin mediated signaling pathway	7.91E-03
126	GO:0009787: regulation of abscisic acid-activated signaling pathway	7.91E-03
127	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	7.91E-03
128	GO:0009819: drought recovery	7.91E-03
129	GO:0006997: nucleus organization	9.09E-03
130	GO:0010204: defense response signaling pathway, resistance gene-independent	9.09E-03
131	GO:0010208: pollen wall assembly	9.09E-03
132	GO:0080167: response to karrikin	9.40E-03
133	GO:0009627: systemic acquired resistance	9.96E-03
134	GO:0015780: nucleotide-sugar transport	1.03E-02
135	GO:0007338: single fertilization	1.03E-02
136	GO:0006098: pentose-phosphate shunt	1.03E-02
137	GO:0019432: triglyceride biosynthetic process	1.03E-02
138	GO:0006950: response to stress	1.05E-02
139	GO:0008202: steroid metabolic process	1.16E-02
140	GO:0010380: regulation of chlorophyll biosynthetic process	1.16E-02
141	GO:0006468: protein phosphorylation	1.27E-02
142	GO:0006499: N-terminal protein myristoylation	1.29E-02
143	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.30E-02
144	GO:0006032: chitin catabolic process	1.30E-02
145	GO:0051555: flavonol biosynthetic process	1.30E-02
146	GO:0010119: regulation of stomatal movement	1.35E-02
147	GO:0009684: indoleacetic acid biosynthetic process	1.44E-02
148	GO:0019684: photosynthesis, light reaction	1.44E-02
149	GO:0009089: lysine biosynthetic process via diaminopimelate	1.44E-02
150	GO:0009867: jasmonic acid mediated signaling pathway	1.48E-02
151	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.58E-02
152	GO:0000266: mitochondrial fission	1.58E-02
153	GO:0012501: programmed cell death	1.58E-02
154	GO:0002213: defense response to insect	1.58E-02
155	GO:2000028: regulation of photoperiodism, flowering	1.73E-02
156	GO:0006829: zinc II ion transport	1.73E-02
157	GO:0006887: exocytosis	1.76E-02
158	GO:0007166: cell surface receptor signaling pathway	1.82E-02
159	GO:0006470: protein dephosphorylation	1.82E-02
160	GO:0034605: cellular response to heat	1.89E-02
161	GO:0010167: response to nitrate	2.05E-02
162	GO:0046688: response to copper ion	2.05E-02
163	GO:0000162: tryptophan biosynthetic process	2.21E-02
164	GO:0006855: drug transmembrane transport	2.23E-02
165	GO:0006825: copper ion transport	2.55E-02
166	GO:0006486: protein glycosylation	2.58E-02
167	GO:0016998: cell wall macromolecule catabolic process	2.73E-02
168	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.91E-02
169	GO:0030433: ubiquitin-dependent ERAD pathway	2.91E-02
170	GO:0031348: negative regulation of defense response	2.91E-02
171	GO:0010017: red or far-red light signaling pathway	2.91E-02
172	GO:0009814: defense response, incompatible interaction	2.91E-02
173	GO:0009723: response to ethylene	3.20E-02
174	GO:0042127: regulation of cell proliferation	3.29E-02
175	GO:0070417: cellular response to cold	3.48E-02
176	GO:0009624: response to nematode	3.67E-02
177	GO:0000271: polysaccharide biosynthetic process	3.68E-02
178	GO:0010182: sugar mediated signaling pathway	3.88E-02
179	GO:0048868: pollen tube development	3.88E-02
180	GO:0045489: pectin biosynthetic process	3.88E-02
181	GO:0006520: cellular amino acid metabolic process	3.88E-02
182	GO:0009646: response to absence of light	4.09E-02
183	GO:0015979: photosynthesis	4.10E-02
184	GO:0071554: cell wall organization or biogenesis	4.51E-02
185	GO:0002229: defense response to oomycetes	4.51E-02
186	GO:0048235: pollen sperm cell differentiation	4.73E-02
187	GO:0019761: glucosinolate biosynthetic process	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
3	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
4	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
5	GO:0004865: protein serine/threonine phosphatase inhibitor activity	0.00E+00
6	GO:0003978: UDP-glucose 4-epimerase activity	8.65E-06
7	GO:0050373: UDP-arabinose 4-epimerase activity	1.12E-04
8	GO:0030552: cAMP binding	1.80E-04
9	GO:0030553: cGMP binding	1.80E-04
10	GO:0005216: ion channel activity	2.80E-04
11	GO:0043295: glutathione binding	4.25E-04
12	GO:0019707: protein-cysteine S-acyltransferase activity	4.40E-04
13	GO:0047940: glucuronokinase activity	4.40E-04
14	GO:2001147: camalexin binding	4.40E-04
15	GO:0015245: fatty acid transporter activity	4.40E-04
16	GO:0010285: L,L-diaminopimelate aminotransferase activity	4.40E-04
17	GO:2001227: quercitrin binding	4.40E-04
18	GO:0005249: voltage-gated potassium channel activity	5.54E-04
19	GO:0030551: cyclic nucleotide binding	5.54E-04
20	GO:0016301: kinase activity	6.27E-04
21	GO:0050736: O-malonyltransferase activity	9.50E-04
22	GO:0048531: beta-1,3-galactosyltransferase activity	9.50E-04
23	GO:0015036: disulfide oxidoreductase activity	9.50E-04
24	GO:0047364: desulfoglucosinolate sulfotransferase activity	9.50E-04
25	GO:0015152: glucose-6-phosphate transmembrane transporter activity	9.50E-04
26	GO:0032934: sterol binding	9.50E-04
27	GO:0004568: chitinase activity	1.06E-03
28	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.10E-03
29	GO:0004674: protein serine/threonine kinase activity	1.40E-03
30	GO:0032403: protein complex binding	1.55E-03
31	GO:0071917: triose-phosphate transmembrane transporter activity	1.55E-03
32	GO:0005457: GDP-fucose transmembrane transporter activity	1.55E-03
33	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.55E-03
34	GO:0004324: ferredoxin-NADP+ reductase activity	1.55E-03
35	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.55E-03
36	GO:0016531: copper chaperone activity	1.55E-03
37	GO:0022890: inorganic cation transmembrane transporter activity	2.24E-03
38	GO:0017077: oxidative phosphorylation uncoupler activity	2.24E-03
39	GO:0035529: NADH pyrophosphatase activity	2.24E-03
40	GO:0001046: core promoter sequence-specific DNA binding	2.49E-03
41	GO:0050378: UDP-glucuronate 4-epimerase activity	3.01E-03
42	GO:0004930: G-protein coupled receptor activity	3.01E-03
43	GO:0015120: phosphoglycerate transmembrane transporter activity	3.01E-03
44	GO:0004834: tryptophan synthase activity	3.01E-03
45	GO:0004737: pyruvate decarboxylase activity	3.01E-03
46	GO:0004364: glutathione transferase activity	3.16E-03
47	GO:0043565: sequence-specific DNA binding	3.67E-03
48	GO:0005496: steroid binding	3.85E-03
49	GO:0047631: ADP-ribose diphosphatase activity	3.85E-03
50	GO:0005471: ATP:ADP antiporter activity	3.85E-03
51	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.85E-03
52	GO:0016773: phosphotransferase activity, alcohol group as acceptor	3.85E-03
53	GO:0002094: polyprenyltransferase activity	3.85E-03
54	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.93E-03
55	GO:0008519: ammonium transmembrane transporter activity	4.77E-03
56	GO:0030976: thiamine pyrophosphate binding	4.77E-03
57	GO:0000210: NAD+ diphosphatase activity	4.77E-03
58	GO:0019901: protein kinase binding	5.73E-03
59	GO:0005261: cation channel activity	5.75E-03
60	GO:0004144: diacylglycerol O-acyltransferase activity	5.75E-03
61	GO:0004656: procollagen-proline 4-dioxygenase activity	5.75E-03
62	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	5.75E-03
63	GO:0016831: carboxy-lyase activity	6.80E-03
64	GO:0004033: aldo-keto reductase (NADP) activity	7.91E-03
65	GO:0004708: MAP kinase kinase activity	7.91E-03
66	GO:0004714: transmembrane receptor protein tyrosine kinase activity	7.91E-03
67	GO:0047893: flavonol 3-O-glucosyltransferase activity	7.91E-03
68	GO:0008483: transaminase activity	7.92E-03
69	GO:0005507: copper ion binding	8.03E-03
70	GO:0008142: oxysterol binding	9.09E-03
71	GO:0008375: acetylglucosaminyltransferase activity	9.96E-03
72	GO:0004721: phosphoprotein phosphatase activity	1.05E-02
73	GO:0047617: acyl-CoA hydrolase activity	1.16E-02
74	GO:0004864: protein phosphatase inhibitor activity	1.30E-02
75	GO:0005509: calcium ion binding	1.36E-02
76	GO:0004722: protein serine/threonine phosphatase activity	1.42E-02
77	GO:0008559: xenobiotic-transporting ATPase activity	1.44E-02
78	GO:0015386: potassium:proton antiporter activity	1.44E-02
79	GO:0015297: antiporter activity	1.45E-02
80	GO:0050661: NADP binding	1.69E-02
81	GO:0005315: inorganic phosphate transmembrane transporter activity	1.73E-02
82	GO:0008266: poly(U) RNA binding	1.89E-02
83	GO:0008146: sulfotransferase activity	2.05E-02
84	GO:0051287: NAD binding	2.32E-02
85	GO:0031418: L-ascorbic acid binding	2.38E-02
86	GO:0003954: NADH dehydrogenase activity	2.38E-02
87	GO:0008324: cation transmembrane transporter activity	2.55E-02
88	GO:0015079: potassium ion transmembrane transporter activity	2.55E-02
89	GO:0005516: calmodulin binding	2.60E-02
90	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.73E-02
91	GO:0035251: UDP-glucosyltransferase activity	2.73E-02
92	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.91E-02
93	GO:0004497: monooxygenase activity	3.49E-02
94	GO:0005199: structural constituent of cell wall	3.88E-02
95	GO:0046873: metal ion transmembrane transporter activity	3.88E-02
96	GO:0050662: coenzyme binding	4.09E-02
97	GO:0015299: solute:proton antiporter activity	4.09E-02
98	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.35E-02
99	GO:0016758: transferase activity, transferring hexosyl groups	4.46E-02
100	GO:0004197: cysteine-type endopeptidase activity	4.73E-02
101	GO:0003824: catalytic activity	4.93E-02
102	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	3.67E-07
2	GO:0005886: plasma membrane	2.35E-05
3	GO:0000813: ESCRT I complex	1.73E-04
4	GO:0000164: protein phosphatase type 1 complex	1.73E-04
5	GO:0005794: Golgi apparatus	1.81E-04
6	GO:0000138: Golgi trans cisterna	4.40E-04
7	GO:0031314: extrinsic component of mitochondrial inner membrane	9.50E-04
8	GO:0031304: intrinsic component of mitochondrial inner membrane	9.50E-04
9	GO:0005901: caveola	9.50E-04
10	GO:0032580: Golgi cisterna membrane	1.02E-03
11	GO:0009530: primary cell wall	1.55E-03
12	GO:0008287: protein serine/threonine phosphatase complex	1.55E-03
13	GO:0070062: extracellular exosome	2.24E-03
14	GO:0005758: mitochondrial intermembrane space	2.49E-03
15	GO:0005802: trans-Golgi network	3.38E-03
16	GO:0000421: autophagosome membrane	7.91E-03
17	GO:0005768: endosome	1.30E-02
18	GO:0005740: mitochondrial envelope	1.30E-02
19	GO:0005743: mitochondrial inner membrane	1.52E-02
20	GO:0005777: peroxisome	1.64E-02
21	GO:0005795: Golgi stack	2.05E-02
22	GO:0005769: early endosome	2.21E-02
23	GO:0070469: respiratory chain	2.55E-02
24	GO:0005887: integral component of plasma membrane	2.67E-02
25	GO:0005741: mitochondrial outer membrane	2.73E-02
26	GO:0031410: cytoplasmic vesicle	2.91E-02
27	GO:0009504: cell plate	4.30E-02
28	GO:0031965: nuclear membrane	4.30E-02
29	GO:0000145: exocyst	4.73E-02