Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G61900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045176: apical protein localization0.00E+00
2GO:0080127: fruit septum development0.00E+00
3GO:0045014: negative regulation of transcription by glucose0.00E+00
4GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA0.00E+00
5GO:0034757: negative regulation of iron ion transport9.33E-05
6GO:0010540: basipetal auxin transport2.08E-04
7GO:0010271: regulation of chlorophyll catabolic process2.20E-04
8GO:0080117: secondary growth3.67E-04
9GO:0009956: radial pattern formation7.02E-04
10GO:0048831: regulation of shoot system development1.08E-03
11GO:0003006: developmental process involved in reproduction1.08E-03
12GO:0048827: phyllome development1.08E-03
13GO:0006694: steroid biosynthetic process1.29E-03
14GO:0048509: regulation of meristem development1.29E-03
15GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.29E-03
16GO:0000160: phosphorelay signal transduction system1.37E-03
17GO:0009416: response to light stimulus1.39E-03
18GO:0006401: RNA catabolic process1.51E-03
19GO:0009610: response to symbiotic fungus1.51E-03
20GO:0016567: protein ubiquitination1.75E-03
21GO:0010052: guard cell differentiation2.00E-03
22GO:0007186: G-protein coupled receptor signaling pathway2.00E-03
23GO:0048589: developmental growth2.25E-03
24GO:0009056: catabolic process2.25E-03
25GO:0048507: meristem development2.25E-03
26GO:0008202: steroid metabolic process2.52E-03
27GO:0009736: cytokinin-activated signaling pathway2.82E-03
28GO:0009750: response to fructose3.09E-03
29GO:0016485: protein processing3.09E-03
30GO:0010152: pollen maturation3.38E-03
31GO:0010582: floral meristem determinacy3.38E-03
32GO:0010229: inflorescence development3.69E-03
33GO:0009718: anthocyanin-containing compound biosynthetic process3.69E-03
34GO:0048467: gynoecium development4.01E-03
35GO:0009933: meristem structural organization4.01E-03
36GO:0009825: multidimensional cell growth4.33E-03
37GO:0080188: RNA-directed DNA methylation4.33E-03
38GO:0080147: root hair cell development5.01E-03
39GO:0006306: DNA methylation5.72E-03
40GO:0016226: iron-sulfur cluster assembly6.09E-03
41GO:0071215: cellular response to abscisic acid stimulus6.47E-03
42GO:0048443: stamen development6.85E-03
43GO:0070417: cellular response to cold7.25E-03
44GO:0010087: phloem or xylem histogenesis7.65E-03
45GO:0048653: anther development7.65E-03
46GO:0009958: positive gravitropism8.06E-03
47GO:0010305: leaf vascular tissue pattern formation8.06E-03
48GO:0048825: cotyledon development8.90E-03
49GO:0009749: response to glucose8.90E-03
50GO:0048510: regulation of timing of transition from vegetative to reproductive phase9.33E-03
51GO:0002229: defense response to oomycetes9.33E-03
52GO:0031047: gene silencing by RNA9.78E-03
53GO:0009658: chloroplast organization1.07E-02
54GO:0009911: positive regulation of flower development1.21E-02
55GO:0010029: regulation of seed germination1.26E-02
56GO:0010411: xyloglucan metabolic process1.36E-02
57GO:0009926: auxin polar transport2.07E-02
58GO:0009744: response to sucrose2.07E-02
59GO:0042546: cell wall biogenesis2.13E-02
60GO:0009636: response to toxic substance2.24E-02
61GO:0009965: leaf morphogenesis2.24E-02
62GO:0006364: rRNA processing2.55E-02
63GO:0009909: regulation of flower development2.75E-02
64GO:0009734: auxin-activated signaling pathway2.76E-02
65GO:0009908: flower development3.14E-02
66GO:0051726: regulation of cell cycle3.42E-02
67GO:0009742: brassinosteroid mediated signaling pathway3.42E-02
68GO:0009737: response to abscisic acid4.47E-02
69GO:0016036: cellular response to phosphate starvation4.61E-02
70GO:0006511: ubiquitin-dependent protein catabolic process4.69E-02
71GO:0009793: embryo development ending in seed dormancy4.94E-02
RankGO TermAdjusted P value
1GO:0008859: exoribonuclease II activity0.00E+00
2GO:0004871: signal transducer activity5.52E-05
3GO:0080062: cytokinin 9-beta-glucosyltransferase activity9.33E-05
4GO:0047807: cytokinin 7-beta-glucosyltransferase activity9.33E-05
5GO:0010296: prenylcysteine methylesterase activity2.20E-04
6GO:0004047: aminomethyltransferase activity2.20E-04
7GO:0008805: carbon-monoxide oxygenase activity2.20E-04
8GO:0009884: cytokinin receptor activity2.20E-04
9GO:0005034: osmosensor activity3.67E-04
10GO:0010011: auxin binding7.02E-04
11GO:0019900: kinase binding1.29E-03
12GO:0008142: oxysterol binding2.00E-03
13GO:0004673: protein histidine kinase activity2.80E-03
14GO:0000155: phosphorelay sensor kinase activity3.69E-03
15GO:0000175: 3'-5'-exoribonuclease activity3.69E-03
16GO:0043424: protein histidine kinase binding5.36E-03
17GO:0004540: ribonuclease activity5.72E-03
18GO:0042802: identical protein binding8.74E-03
19GO:0019901: protein kinase binding8.90E-03
20GO:0016762: xyloglucan:xyloglucosyl transferase activity9.33E-03
21GO:0000156: phosphorelay response regulator activity1.02E-02
22GO:0008237: metallopeptidase activity1.11E-02
23GO:0016798: hydrolase activity, acting on glycosyl bonds1.36E-02
24GO:0008236: serine-type peptidase activity1.41E-02
25GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.56E-02
26GO:0004222: metalloendopeptidase activity1.56E-02
27GO:0004712: protein serine/threonine/tyrosine kinase activity1.84E-02
28GO:0043621: protein self-association2.18E-02
29GO:0035091: phosphatidylinositol binding2.18E-02
30GO:0080043: quercetin 3-O-glucosyltransferase activity3.08E-02
31GO:0080044: quercetin 7-O-glucosyltransferase activity3.08E-02
32GO:0004386: helicase activity3.49E-02
33GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.56E-02
34GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.61E-02
35GO:0016301: kinase activity4.66E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0000178: exosome (RNase complex)8.88E-04
3GO:0016602: CCAAT-binding factor complex3.69E-03
4GO:0000419: DNA-directed RNA polymerase V complex4.67E-03
5GO:0005770: late endosome8.06E-03
6GO:0071944: cell periphery1.02E-02
7GO:0000932: P-body1.21E-02
8GO:0005789: endoplasmic reticulum membrane2.97E-02
9GO:0005834: heterotrimeric G-protein complex3.01E-02
10GO:0005759: mitochondrial matrix4.53E-02
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Gene type



Gene DE type