co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G61640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001143: N-methylnicotinate transport	0.00E+00
2	GO:0033198: response to ATP	0.00E+00
3	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
4	GO:2001142: nicotinate transport	0.00E+00
5	GO:0002764: immune response-regulating signaling pathway	0.00E+00
6	GO:0032497: detection of lipopolysaccharide	0.00E+00
7	GO:0009626: plant-type hypersensitive response	5.90E-06
8	GO:0000187: activation of MAPK activity	9.15E-06
9	GO:0006468: protein phosphorylation	5.67E-05
10	GO:2000037: regulation of stomatal complex patterning	5.87E-05
11	GO:0034975: protein folding in endoplasmic reticulum	1.46E-04
12	GO:0048482: plant ovule morphogenesis	1.46E-04
13	GO:0010365: positive regulation of ethylene biosynthetic process	1.46E-04
14	GO:0051245: negative regulation of cellular defense response	1.46E-04
15	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.46E-04
16	GO:0010941: regulation of cell death	1.46E-04
17	GO:0010045: response to nickel cation	1.46E-04
18	GO:0051180: vitamin transport	1.46E-04
19	GO:0030974: thiamine pyrophosphate transport	1.46E-04
20	GO:0043069: negative regulation of programmed cell death	2.22E-04
21	GO:0002221: pattern recognition receptor signaling pathway	3.33E-04
22	GO:0046939: nucleotide phosphorylation	3.33E-04
23	GO:0080185: effector dependent induction by symbiont of host immune response	3.33E-04
24	GO:0015893: drug transport	3.33E-04
25	GO:0060919: auxin influx	3.33E-04
26	GO:0010042: response to manganese ion	3.33E-04
27	GO:0010541: acropetal auxin transport	3.33E-04
28	GO:0010229: inflorescence development	3.41E-04
29	GO:0034605: cellular response to heat	3.85E-04
30	GO:0002237: response to molecule of bacterial origin	3.85E-04
31	GO:0070588: calcium ion transmembrane transport	4.32E-04
32	GO:0009863: salicylic acid mediated signaling pathway	5.33E-04
33	GO:0051176: positive regulation of sulfur metabolic process	5.47E-04
34	GO:0046621: negative regulation of organ growth	5.47E-04
35	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	5.47E-04
36	GO:0010581: regulation of starch biosynthetic process	5.47E-04
37	GO:0002230: positive regulation of defense response to virus by host	5.47E-04
38	GO:0016045: detection of bacterium	5.47E-04
39	GO:0010359: regulation of anion channel activity	5.47E-04
40	GO:0009814: defense response, incompatible interaction	7.02E-04
41	GO:0010227: floral organ abscission	7.64E-04
42	GO:0046713: borate transport	7.83E-04
43	GO:1902358: sulfate transmembrane transport	7.83E-04
44	GO:0030100: regulation of endocytosis	7.83E-04
45	GO:0006612: protein targeting to membrane	7.83E-04
46	GO:0015696: ammonium transport	7.83E-04
47	GO:0010200: response to chitin	8.66E-04
48	GO:0080142: regulation of salicylic acid biosynthetic process	1.04E-03
49	GO:0046345: abscisic acid catabolic process	1.04E-03
50	GO:0072488: ammonium transmembrane transport	1.04E-03
51	GO:0010363: regulation of plant-type hypersensitive response	1.04E-03
52	GO:2000038: regulation of stomatal complex development	1.04E-03
53	GO:0009751: response to salicylic acid	1.44E-03
54	GO:0048317: seed morphogenesis	1.61E-03
55	GO:0010315: auxin efflux	1.61E-03
56	GO:0034314: Arp2/3 complex-mediated actin nucleation	1.61E-03
57	GO:0009615: response to virus	1.81E-03
58	GO:0009816: defense response to bacterium, incompatible interaction	1.92E-03
59	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.93E-03
60	GO:0009423: chorismate biosynthetic process	1.93E-03
61	GO:0010038: response to metal ion	2.27E-03
62	GO:1900056: negative regulation of leaf senescence	2.27E-03
63	GO:0070370: cellular heat acclimation	2.27E-03
64	GO:0006952: defense response	2.35E-03
65	GO:0009817: defense response to fungus, incompatible interaction	2.36E-03
66	GO:0032875: regulation of DNA endoreduplication	2.63E-03
67	GO:0045010: actin nucleation	2.63E-03
68	GO:0030162: regulation of proteolysis	2.63E-03
69	GO:1900150: regulation of defense response to fungus	2.63E-03
70	GO:0042742: defense response to bacterium	2.65E-03
71	GO:0006865: amino acid transport	2.85E-03
72	GO:0009932: cell tip growth	3.00E-03
73	GO:0071482: cellular response to light stimulus	3.00E-03
74	GO:0048193: Golgi vesicle transport	3.00E-03
75	GO:0010204: defense response signaling pathway, resistance gene-independent	3.00E-03
76	GO:0009060: aerobic respiration	3.40E-03
77	GO:0000902: cell morphogenesis	3.40E-03
78	GO:0051865: protein autoubiquitination	3.40E-03
79	GO:0006887: exocytosis	3.53E-03
80	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.23E-03
81	GO:0006032: chitin catabolic process	4.23E-03
82	GO:0080167: response to karrikin	4.56E-03
83	GO:0000165: MAPK cascade	4.63E-03
84	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.63E-03
85	GO:0000272: polysaccharide catabolic process	4.67E-03
86	GO:0009073: aromatic amino acid family biosynthetic process	4.67E-03
87	GO:0046777: protein autophosphorylation	4.97E-03
88	GO:0016925: protein sumoylation	5.13E-03
89	GO:0009785: blue light signaling pathway	5.60E-03
90	GO:0009909: regulation of flower development	5.70E-03
91	GO:0006446: regulation of translational initiation	6.09E-03
92	GO:0010540: basipetal auxin transport	6.09E-03
93	GO:0007015: actin filament organization	6.09E-03
94	GO:0010053: root epidermal cell differentiation	6.59E-03
95	GO:0042343: indole glucosinolate metabolic process	6.59E-03
96	GO:0009825: multidimensional cell growth	6.59E-03
97	GO:0009620: response to fungus	6.68E-03
98	GO:0009695: jasmonic acid biosynthetic process	8.18E-03
99	GO:0003333: amino acid transmembrane transport	8.73E-03
100	GO:0016998: cell wall macromolecule catabolic process	8.73E-03
101	GO:0098542: defense response to other organism	8.73E-03
102	GO:0048278: vesicle docking	8.73E-03
103	GO:0010017: red or far-red light signaling pathway	9.30E-03
104	GO:0016226: iron-sulfur cluster assembly	9.30E-03
105	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.30E-03
106	GO:0070417: cellular response to cold	1.11E-02
107	GO:0000413: protein peptidyl-prolyl isomerization	1.17E-02
108	GO:0042391: regulation of membrane potential	1.17E-02
109	GO:0000271: polysaccharide biosynthetic process	1.17E-02
110	GO:0045489: pectin biosynthetic process	1.24E-02
111	GO:0071472: cellular response to salt stress	1.24E-02
112	GO:0061025: membrane fusion	1.30E-02
113	GO:0048544: recognition of pollen	1.30E-02
114	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.42E-02
115	GO:0002229: defense response to oomycetes	1.43E-02
116	GO:0010193: response to ozone	1.43E-02
117	GO:0006891: intra-Golgi vesicle-mediated transport	1.43E-02
118	GO:0007166: cell surface receptor signaling pathway	1.45E-02
119	GO:0009738: abscisic acid-activated signaling pathway	1.49E-02
120	GO:0009630: gravitropism	1.50E-02
121	GO:0016032: viral process	1.50E-02
122	GO:0009617: response to bacterium	1.52E-02
123	GO:0010090: trichome morphogenesis	1.57E-02
124	GO:0006464: cellular protein modification process	1.64E-02
125	GO:0006904: vesicle docking involved in exocytosis	1.72E-02
126	GO:0051607: defense response to virus	1.79E-02
127	GO:0000910: cytokinesis	1.79E-02
128	GO:0009911: positive regulation of flower development	1.86E-02
129	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.94E-02
130	GO:0009627: systemic acquired resistance	2.01E-02
131	GO:0006906: vesicle fusion	2.01E-02
132	GO:0048573: photoperiodism, flowering	2.09E-02
133	GO:0006970: response to osmotic stress	2.12E-02
134	GO:0009651: response to salt stress	2.16E-02
135	GO:0016049: cell growth	2.17E-02
136	GO:0008219: cell death	2.25E-02
137	GO:0048767: root hair elongation	2.33E-02
138	GO:0006499: N-terminal protein myristoylation	2.41E-02
139	GO:0010043: response to zinc ion	2.49E-02
140	GO:0048527: lateral root development	2.49E-02
141	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.53E-02
142	GO:0044550: secondary metabolite biosynthetic process	2.65E-02
143	GO:0009867: jasmonic acid mediated signaling pathway	2.66E-02
144	GO:0045087: innate immune response	2.66E-02
145	GO:0016051: carbohydrate biosynthetic process	2.66E-02
146	GO:0006839: mitochondrial transport	2.92E-02
147	GO:0006897: endocytosis	3.01E-02
148	GO:0006886: intracellular protein transport	3.01E-02
149	GO:0009926: auxin polar transport	3.19E-02
150	GO:0009640: photomorphogenesis	3.19E-02
151	GO:0000209: protein polyubiquitination	3.28E-02
152	GO:0006855: drug transmembrane transport	3.56E-02
153	GO:0031347: regulation of defense response	3.65E-02
154	GO:0042538: hyperosmotic salinity response	3.75E-02
155	GO:0009873: ethylene-activated signaling pathway	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
2	GO:0090416: nicotinate transporter activity	0.00E+00
3	GO:0003856: 3-dehydroquinate synthase activity	0.00E+00
4	GO:0005522: profilin binding	0.00E+00
5	GO:0005524: ATP binding	2.48E-05
6	GO:0016301: kinase activity	3.12E-05
7	GO:0004708: MAP kinase kinase activity	1.02E-04
8	GO:1901149: salicylic acid binding	1.46E-04
9	GO:0090422: thiamine pyrophosphate transporter activity	1.46E-04
10	GO:0015085: calcium ion transmembrane transporter activity	1.46E-04
11	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.46E-04
12	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.46E-04
13	GO:0004674: protein serine/threonine kinase activity	1.70E-04
14	GO:0080041: ADP-ribose pyrophosphohydrolase activity	3.33E-04
15	GO:0017110: nucleoside-diphosphatase activity	3.33E-04
16	GO:0005388: calcium-transporting ATPase activity	3.41E-04
17	GO:0019948: SUMO activating enzyme activity	5.47E-04
18	GO:0016174: NAD(P)H oxidase activity	5.47E-04
19	GO:0046423: allene-oxide cyclase activity	5.47E-04
20	GO:0019201: nucleotide kinase activity	7.83E-04
21	GO:0010328: auxin influx transmembrane transporter activity	1.04E-03
22	GO:0019199: transmembrane receptor protein kinase activity	1.04E-03
23	GO:0047631: ADP-ribose diphosphatase activity	1.31E-03
24	GO:0010294: abscisic acid glucosyltransferase activity	1.31E-03
25	GO:0008519: ammonium transmembrane transporter activity	1.61E-03
26	GO:0000210: NAD+ diphosphatase activity	1.61E-03
27	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.62E-03
28	GO:0004017: adenylate kinase activity	1.93E-03
29	GO:0005509: calcium ion binding	2.30E-03
30	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.63E-03
31	GO:0008271: secondary active sulfate transmembrane transporter activity	3.00E-03
32	GO:0005515: protein binding	3.05E-03
33	GO:0004568: chitinase activity	4.23E-03
34	GO:0008047: enzyme activator activity	4.23E-03
35	GO:0008559: xenobiotic-transporting ATPase activity	4.67E-03
36	GO:0015116: sulfate transmembrane transporter activity	5.13E-03
37	GO:0004672: protein kinase activity	5.20E-03
38	GO:0010329: auxin efflux transmembrane transporter activity	5.60E-03
39	GO:0015171: amino acid transmembrane transporter activity	5.70E-03
40	GO:0031625: ubiquitin protein ligase binding	5.70E-03
41	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.09E-03
42	GO:0005516: calmodulin binding	6.55E-03
43	GO:0030552: cAMP binding	6.59E-03
44	GO:0030553: cGMP binding	6.59E-03
45	GO:0008061: chitin binding	6.59E-03
46	GO:0003779: actin binding	7.11E-03
47	GO:0008270: zinc ion binding	7.30E-03
48	GO:0005525: GTP binding	7.49E-03
49	GO:0015035: protein disulfide oxidoreductase activity	7.54E-03
50	GO:0043130: ubiquitin binding	7.63E-03
51	GO:0005216: ion channel activity	8.18E-03
52	GO:0033612: receptor serine/threonine kinase binding	8.73E-03
53	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	9.30E-03
54	GO:0022891: substrate-specific transmembrane transporter activity	9.89E-03
55	GO:0003756: protein disulfide isomerase activity	1.05E-02
56	GO:0005249: voltage-gated potassium channel activity	1.17E-02
57	GO:0030551: cyclic nucleotide binding	1.17E-02
58	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.18E-02
59	GO:0003713: transcription coactivator activity	1.24E-02
60	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.57E-02
61	GO:0051015: actin filament binding	1.57E-02
62	GO:0043565: sequence-specific DNA binding	1.62E-02
63	GO:0005200: structural constituent of cytoskeleton	1.72E-02
64	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.01E-02
65	GO:0008375: acetylglucosaminyltransferase activity	2.01E-02
66	GO:0004683: calmodulin-dependent protein kinase activity	2.09E-02
67	GO:0043531: ADP binding	2.16E-02
68	GO:0015238: drug transmembrane transporter activity	2.33E-02
69	GO:0019825: oxygen binding	2.42E-02
70	GO:0000149: SNARE binding	2.83E-02
71	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.16E-02
72	GO:0005484: SNAP receptor activity	3.19E-02
73	GO:0015293: symporter activity	3.47E-02
74	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.56E-02
75	GO:0003924: GTPase activity	3.60E-02
76	GO:0051287: NAD binding	3.65E-02
77	GO:0005506: iron ion binding	3.68E-02
78	GO:0044212: transcription regulatory region DNA binding	3.75E-02
79	GO:0008234: cysteine-type peptidase activity	4.24E-02
80	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.75E-02
81	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.75E-02
82	GO:0022857: transmembrane transporter activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.12E-06
2	GO:0005911: cell-cell junction	1.46E-04
3	GO:0016021: integral component of membrane	3.82E-04
4	GO:0005887: integral component of plasma membrane	4.81E-04
5	GO:0012505: endomembrane system	9.73E-04
6	GO:0005885: Arp2/3 protein complex	1.93E-03
7	GO:0005768: endosome	2.20E-03
8	GO:0090404: pollen tube tip	4.67E-03
9	GO:0010008: endosome membrane	6.28E-03
10	GO:0005795: Golgi stack	6.59E-03
11	GO:0043234: protein complex	7.10E-03
12	GO:0009504: cell plate	1.37E-02
13	GO:0000145: exocyst	1.50E-02
14	GO:0019005: SCF ubiquitin ligase complex	2.25E-02
15	GO:0031201: SNARE complex	3.01E-02
16	GO:0090406: pollen tube	3.19E-02
17	GO:0005829: cytosol	3.71E-02
18	GO:0043231: intracellular membrane-bounded organelle	3.96E-02