Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G61560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010200: response to chitin2.36E-07
2GO:0006952: defense response9.32E-06
3GO:0009816: defense response to bacterium, incompatible interaction2.28E-05
4GO:0042742: defense response to bacterium2.81E-05
5GO:0006643: membrane lipid metabolic process5.34E-05
6GO:0080157: regulation of plant-type cell wall organization or biogenesis5.34E-05
7GO:0050691: regulation of defense response to virus by host5.34E-05
8GO:1902065: response to L-glutamate5.34E-05
9GO:0042754: negative regulation of circadian rhythm1.30E-04
10GO:0090057: root radial pattern formation1.30E-04
11GO:0006468: protein phosphorylation1.69E-04
12GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening2.22E-04
13GO:0002679: respiratory burst involved in defense response3.25E-04
14GO:0034219: carbohydrate transmembrane transport3.25E-04
15GO:0072334: UDP-galactose transmembrane transport3.25E-04
16GO:0010508: positive regulation of autophagy4.35E-04
17GO:0045727: positive regulation of translation4.35E-04
18GO:0022622: root system development4.35E-04
19GO:0009611: response to wounding4.67E-04
20GO:0060918: auxin transport6.76E-04
21GO:0009759: indole glucosinolate biosynthetic process6.76E-04
22GO:0098655: cation transmembrane transport8.05E-04
23GO:0007165: signal transduction8.75E-04
24GO:0070370: cellular heat acclimation9.40E-04
25GO:0010044: response to aluminum ion9.40E-04
26GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway9.40E-04
27GO:0046470: phosphatidylcholine metabolic process9.40E-04
28GO:0006644: phospholipid metabolic process1.08E-03
29GO:0010120: camalexin biosynthetic process1.23E-03
30GO:0043562: cellular response to nitrogen levels1.23E-03
31GO:0009699: phenylpropanoid biosynthetic process1.23E-03
32GO:0009846: pollen germination1.28E-03
33GO:0051865: protein autoubiquitination1.38E-03
34GO:0010224: response to UV-B1.42E-03
35GO:0010449: root meristem growth1.54E-03
36GO:0007064: mitotic sister chromatid cohesion1.71E-03
37GO:0015770: sucrose transport1.88E-03
38GO:0030148: sphingolipid biosynthetic process1.88E-03
39GO:0009698: phenylpropanoid metabolic process1.88E-03
40GO:0009682: induced systemic resistance1.88E-03
41GO:0052544: defense response by callose deposition in cell wall1.88E-03
42GO:0010105: negative regulation of ethylene-activated signaling pathway2.06E-03
43GO:0009409: response to cold2.06E-03
44GO:0007034: vacuolar transport2.43E-03
45GO:0034605: cellular response to heat2.43E-03
46GO:0002237: response to molecule of bacterial origin2.43E-03
47GO:0070588: calcium ion transmembrane transport2.63E-03
48GO:0005985: sucrose metabolic process2.63E-03
49GO:0009695: jasmonic acid biosynthetic process3.24E-03
50GO:0015992: proton transport3.46E-03
51GO:0009814: defense response, incompatible interaction3.68E-03
52GO:0007166: cell surface receptor signaling pathway3.77E-03
53GO:0001944: vasculature development3.90E-03
54GO:0009625: response to insect3.90E-03
55GO:0009737: response to abscisic acid4.10E-03
56GO:0010584: pollen exine formation4.13E-03
57GO:0042391: regulation of membrane potential4.60E-03
58GO:0009958: positive gravitropism4.84E-03
59GO:0006970: response to osmotic stress5.48E-03
60GO:0010193: response to ozone5.60E-03
61GO:0009723: response to ethylene5.89E-03
62GO:0046777: protein autophosphorylation6.74E-03
63GO:0045892: negative regulation of transcription, DNA-templated7.66E-03
64GO:0009651: response to salt stress8.16E-03
65GO:0016049: cell growth8.38E-03
66GO:0009751: response to salicylic acid9.17E-03
67GO:0009408: response to heat9.31E-03
68GO:0009631: cold acclimation9.61E-03
69GO:0009753: response to jasmonic acid9.99E-03
70GO:0045087: innate immune response1.02E-02
71GO:0009873: ethylene-activated signaling pathway1.20E-02
72GO:0042546: cell wall biogenesis1.26E-02
73GO:0000165: MAPK cascade1.40E-02
74GO:0031347: regulation of defense response1.40E-02
75GO:0009809: lignin biosynthetic process1.51E-02
76GO:0035556: intracellular signal transduction1.75E-02
77GO:0009626: plant-type hypersensitive response1.78E-02
78GO:0009624: response to nematode1.94E-02
79GO:0018105: peptidyl-serine phosphorylation1.98E-02
80GO:0006351: transcription, DNA-templated2.00E-02
81GO:0040008: regulation of growth2.77E-02
82GO:0007623: circadian rhythm2.87E-02
83GO:0009451: RNA modification2.91E-02
84GO:0009739: response to gibberellin3.11E-02
85GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.11E-02
86GO:0009617: response to bacterium3.25E-02
87GO:0010468: regulation of gene expression3.25E-02
88GO:0009414: response to water deprivation3.28E-02
89GO:0006979: response to oxidative stress3.38E-02
90GO:0009733: response to auxin3.77E-02
91GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.67E-02
92GO:0016192: vesicle-mediated transport4.73E-02
93GO:0006355: regulation of transcription, DNA-templated4.88E-02
RankGO TermAdjusted P value
1GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity5.34E-05
2GO:0043531: ADP binding7.20E-05
3GO:0016301: kinase activity9.10E-05
4GO:0005516: calmodulin binding1.28E-04
5GO:0045140: inositol phosphoceramide synthase activity1.30E-04
6GO:0004674: protein serine/threonine kinase activity2.44E-04
7GO:0042277: peptide binding4.35E-04
8GO:0005459: UDP-galactose transmembrane transporter activity5.52E-04
9GO:0005546: phosphatidylinositol-4,5-bisphosphate binding5.52E-04
10GO:0005524: ATP binding5.95E-04
11GO:0004709: MAP kinase kinase kinase activity6.76E-04
12GO:0019900: kinase binding8.05E-04
13GO:0008195: phosphatidate phosphatase activity8.05E-04
14GO:0008506: sucrose:proton symporter activity9.40E-04
15GO:0016621: cinnamoyl-CoA reductase activity9.40E-04
16GO:0004630: phospholipase D activity1.23E-03
17GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.23E-03
18GO:0044212: transcription regulatory region DNA binding1.30E-03
19GO:0016207: 4-coumarate-CoA ligase activity1.38E-03
20GO:0047617: acyl-CoA hydrolase activity1.54E-03
21GO:0008559: xenobiotic-transporting ATPase activity1.88E-03
22GO:0005262: calcium channel activity2.25E-03
23GO:0005388: calcium-transporting ATPase activity2.25E-03
24GO:0000175: 3'-5'-exoribonuclease activity2.25E-03
25GO:0004535: poly(A)-specific ribonuclease activity2.43E-03
26GO:0030552: cAMP binding2.63E-03
27GO:0030553: cGMP binding2.63E-03
28GO:0005216: ion channel activity3.24E-03
29GO:0008408: 3'-5' exonuclease activity3.46E-03
30GO:0004540: ribonuclease activity3.46E-03
31GO:0043565: sequence-specific DNA binding4.20E-03
32GO:0005249: voltage-gated potassium channel activity4.60E-03
33GO:0030551: cyclic nucleotide binding4.60E-03
34GO:0050662: coenzyme binding5.09E-03
35GO:0016853: isomerase activity5.09E-03
36GO:0009931: calcium-dependent protein serine/threonine kinase activity7.79E-03
37GO:0004683: calmodulin-dependent protein kinase activity8.09E-03
38GO:0008757: S-adenosylmethionine-dependent methyltransferase activity8.38E-03
39GO:0004672: protein kinase activity1.11E-02
40GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.74E-02
41GO:0016874: ligase activity1.86E-02
42GO:0015144: carbohydrate transmembrane transporter activity2.59E-02
43GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.73E-02
44GO:0005351: sugar:proton symporter activity2.82E-02
45GO:0005509: calcium ion binding3.10E-02
46GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.40E-02
47GO:0008168: methyltransferase activity3.81E-02
48GO:0016788: hydrolase activity, acting on ester bonds3.96E-02
49GO:0003682: chromatin binding4.07E-02
50GO:0003700: transcription factor activity, sequence-specific DNA binding4.42E-02
51GO:0004842: ubiquitin-protein transferase activity4.62E-02
52GO:0061630: ubiquitin protein ligase activity4.73E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane3.01E-05
2GO:0030014: CCR4-NOT complex5.34E-05
3GO:0005887: integral component of plasma membrane2.96E-04
4GO:0030173: integral component of Golgi membrane8.05E-04
5GO:0016604: nuclear body1.54E-03
6GO:0030176: integral component of endoplasmic reticulum membrane2.63E-03
7GO:0000325: plant-type vacuole9.61E-03
8GO:0009706: chloroplast inner membrane1.94E-02
9GO:0046658: anchored component of plasma membrane3.50E-02
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Gene type



Gene DE type