co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G61120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0006216: cytidine catabolic process	0.00E+00
3	GO:0048034: heme O biosynthetic process	0.00E+00
4	GO:0006784: heme a biosynthetic process	0.00E+00
5	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
6	GO:0010398: xylogalacturonan metabolic process	0.00E+00
7	GO:0010120: camalexin biosynthetic process	3.49E-05
8	GO:0042964: thioredoxin reduction	6.26E-05
9	GO:0046686: response to cadmium ion	1.44E-04
10	GO:0046939: nucleotide phosphorylation	1.52E-04
11	GO:0010272: response to silver ion	2.57E-04
12	GO:0006556: S-adenosylmethionine biosynthetic process	2.57E-04
13	GO:0040009: regulation of growth rate	2.57E-04
14	GO:0080028: nitrile biosynthetic process	3.73E-04
15	GO:0010150: leaf senescence	4.84E-04
16	GO:0010188: response to microbial phytotoxin	4.99E-04
17	GO:0010252: auxin homeostasis	5.16E-04
18	GO:0009615: response to virus	6.12E-04
19	GO:0006461: protein complex assembly	6.32E-04
20	GO:0098719: sodium ion import across plasma membrane	6.32E-04
21	GO:0006564: L-serine biosynthetic process	6.32E-04
22	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	7.73E-04
23	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	7.73E-04
24	GO:0009972: cytidine deamination	7.73E-04
25	GO:0006561: proline biosynthetic process	7.73E-04
26	GO:0009407: toxin catabolic process	8.67E-04
27	GO:0009082: branched-chain amino acid biosynthetic process	9.20E-04
28	GO:0009099: valine biosynthetic process	9.20E-04
29	GO:0080113: regulation of seed growth	9.20E-04
30	GO:0006099: tricarboxylic acid cycle	1.03E-03
31	GO:1900056: negative regulation of leaf senescence	1.07E-03
32	GO:0071669: plant-type cell wall organization or biogenesis	1.07E-03
33	GO:0050829: defense response to Gram-negative bacterium	1.07E-03
34	GO:0055114: oxidation-reduction process	1.10E-03
35	GO:0006102: isocitrate metabolic process	1.24E-03
36	GO:0007165: signal transduction	1.27E-03
37	GO:0045454: cell redox homeostasis	1.35E-03
38	GO:0019430: removal of superoxide radicals	1.41E-03
39	GO:0009097: isoleucine biosynthetic process	1.41E-03
40	GO:0009821: alkaloid biosynthetic process	1.58E-03
41	GO:0006783: heme biosynthetic process	1.58E-03
42	GO:0006754: ATP biosynthetic process	1.58E-03
43	GO:0051453: regulation of intracellular pH	1.77E-03
44	GO:0009098: leucine biosynthetic process	1.77E-03
45	GO:0006032: chitin catabolic process	1.96E-03
46	GO:0043069: negative regulation of programmed cell death	1.96E-03
47	GO:0009620: response to fungus	2.17E-03
48	GO:0009682: induced systemic resistance	2.17E-03
49	GO:0006415: translational termination	2.17E-03
50	GO:0000272: polysaccharide catabolic process	2.17E-03
51	GO:0071365: cellular response to auxin stimulus	2.37E-03
52	GO:0009718: anthocyanin-containing compound biosynthetic process	2.58E-03
53	GO:0006807: nitrogen compound metabolic process	2.58E-03
54	GO:0009058: biosynthetic process	3.11E-03
55	GO:0019762: glucosinolate catabolic process	3.26E-03
56	GO:0000162: tryptophan biosynthetic process	3.26E-03
57	GO:0005992: trehalose biosynthetic process	3.49E-03
58	GO:0045333: cellular respiration	3.49E-03
59	GO:0003333: amino acid transmembrane transport	3.98E-03
60	GO:0016998: cell wall macromolecule catabolic process	3.98E-03
61	GO:0030245: cellulose catabolic process	4.24E-03
62	GO:0006730: one-carbon metabolic process	4.24E-03
63	GO:0009693: ethylene biosynthetic process	4.50E-03
64	GO:0009617: response to bacterium	4.84E-03
65	GO:0015991: ATP hydrolysis coupled proton transport	5.31E-03
66	GO:0042631: cellular response to water deprivation	5.31E-03
67	GO:0045489: pectin biosynthetic process	5.59E-03
68	GO:0006662: glycerol ether metabolic process	5.59E-03
69	GO:0006814: sodium ion transport	5.88E-03
70	GO:0010183: pollen tube guidance	6.17E-03
71	GO:0071554: cell wall organization or biogenesis	6.46E-03
72	GO:0071281: cellular response to iron ion	7.07E-03
73	GO:0009567: double fertilization forming a zygote and endosperm	7.38E-03
74	GO:0019760: glucosinolate metabolic process	7.38E-03
75	GO:0006464: cellular protein modification process	7.38E-03
76	GO:0071805: potassium ion transmembrane transport	7.70E-03
77	GO:0006979: response to oxidative stress	8.97E-03
78	GO:0009627: systemic acquired resistance	9.01E-03
79	GO:0050832: defense response to fungus	9.36E-03
80	GO:0016049: cell growth	9.70E-03
81	GO:0009733: response to auxin	1.03E-02
82	GO:0010311: lateral root formation	1.04E-02
83	GO:0009751: response to salicylic acid	1.13E-02
84	GO:0045087: innate immune response	1.19E-02
85	GO:0034599: cellular response to oxidative stress	1.23E-02
86	GO:0009926: auxin polar transport	1.42E-02
87	GO:0009636: response to toxic substance	1.54E-02
88	GO:0031347: regulation of defense response	1.63E-02
89	GO:0009664: plant-type cell wall organization	1.67E-02
90	GO:0009846: pollen germination	1.67E-02
91	GO:0042538: hyperosmotic salinity response	1.67E-02
92	GO:0048316: seed development	2.02E-02
93	GO:0009611: response to wounding	2.09E-02
94	GO:0042545: cell wall modification	2.21E-02
95	GO:0006952: defense response	2.39E-02
96	GO:0042744: hydrogen peroxide catabolic process	2.90E-02
97	GO:0040008: regulation of growth	3.22E-02
98	GO:0045490: pectin catabolic process	3.33E-02
99	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.60E-02
100	GO:0009739: response to gibberellin	3.60E-02
101	GO:0071555: cell wall organization	4.13E-02
102	GO:0042742: defense response to bacterium	4.13E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
3	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
4	GO:0047844: deoxycytidine deaminase activity	0.00E+00
5	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
6	GO:0008495: protoheme IX farnesyltransferase activity	0.00E+00
7	GO:0010179: IAA-Ala conjugate hydrolase activity	6.26E-05
8	GO:0004425: indole-3-glycerol-phosphate synthase activity	6.26E-05
9	GO:0000824: inositol tetrakisphosphate 3-kinase activity	6.26E-05
10	GO:0047326: inositol tetrakisphosphate 5-kinase activity	6.26E-05
11	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	6.26E-05
12	GO:0048037: cofactor binding	6.26E-05
13	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	6.26E-05
14	GO:0004617: phosphoglycerate dehydrogenase activity	1.52E-04
15	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.52E-04
16	GO:1990585: hydroxyproline O-arabinosyltransferase activity	1.52E-04
17	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.52E-04
18	GO:0004478: methionine adenosyltransferase activity	2.57E-04
19	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	2.57E-04
20	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	3.73E-04
21	GO:0052655: L-valine transaminase activity	3.73E-04
22	GO:0004791: thioredoxin-disulfide reductase activity	3.73E-04
23	GO:0019201: nucleotide kinase activity	3.73E-04
24	GO:0004416: hydroxyacylglutathione hydrolase activity	3.73E-04
25	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.73E-04
26	GO:0016149: translation release factor activity, codon specific	3.73E-04
27	GO:0052656: L-isoleucine transaminase activity	3.73E-04
28	GO:0052654: L-leucine transaminase activity	3.73E-04
29	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.99E-04
30	GO:0004084: branched-chain-amino-acid transaminase activity	4.99E-04
31	GO:0010279: indole-3-acetic acid amido synthetase activity	4.99E-04
32	GO:0004659: prenyltransferase activity	4.99E-04
33	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	7.73E-04
34	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	7.73E-04
35	GO:0035252: UDP-xylosyltransferase activity	7.73E-04
36	GO:0004126: cytidine deaminase activity	9.20E-04
37	GO:0004017: adenylate kinase activity	9.20E-04
38	GO:0043295: glutathione binding	1.07E-03
39	GO:0004364: glutathione transferase activity	1.21E-03
40	GO:0004311: farnesyltranstransferase activity	1.24E-03
41	GO:0003747: translation release factor activity	1.58E-03
42	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.58E-03
43	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.58E-03
44	GO:0016844: strictosidine synthase activity	1.77E-03
45	GO:0015174: basic amino acid transmembrane transporter activity	1.77E-03
46	GO:0009672: auxin:proton symporter activity	1.77E-03
47	GO:0004568: chitinase activity	1.96E-03
48	GO:0015386: potassium:proton antiporter activity	2.17E-03
49	GO:0008794: arsenate reductase (glutaredoxin) activity	2.17E-03
50	GO:0015035: protein disulfide oxidoreductase activity	2.44E-03
51	GO:0010329: auxin efflux transmembrane transporter activity	2.58E-03
52	GO:0008061: chitin binding	3.03E-03
53	GO:0008810: cellulase activity	4.50E-03
54	GO:0047134: protein-disulfide reductase activity	5.03E-03
55	GO:0005199: structural constituent of cell wall	5.59E-03
56	GO:0001085: RNA polymerase II transcription factor binding	5.59E-03
57	GO:0010181: FMN binding	5.88E-03
58	GO:0004601: peroxidase activity	6.27E-03
59	GO:0015385: sodium:proton antiporter activity	7.07E-03
60	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	7.07E-03
61	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	7.70E-03
62	GO:0008237: metallopeptidase activity	7.70E-03
63	GO:0016413: O-acetyltransferase activity	8.02E-03
64	GO:0016597: amino acid binding	8.02E-03
65	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.11E-02
66	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.19E-02
67	GO:0051287: NAD binding	1.63E-02
68	GO:0016298: lipase activity	1.80E-02
69	GO:0015171: amino acid transmembrane transporter activity	1.89E-02
70	GO:0045330: aspartyl esterase activity	1.89E-02
71	GO:0030599: pectinesterase activity	2.16E-02
72	GO:0030170: pyridoxal phosphate binding	2.85E-02
73	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.90E-02
74	GO:0005507: copper ion binding	2.91E-02
75	GO:0046910: pectinesterase inhibitor activity	3.17E-02
76	GO:0005509: calcium ion binding	3.81E-02
77	GO:0005506: iron ion binding	4.07E-02
78	GO:0016757: transferase activity, transferring glycosyl groups	4.13E-02
79	GO:0000287: magnesium ion binding	4.48E-02
80	GO:0003824: catalytic activity	4.53E-02
81	GO:0003682: chromatin binding	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0009530: primary cell wall	2.57E-04
2	GO:0005886: plasma membrane	1.67E-03
3	GO:0005794: Golgi apparatus	6.87E-03
4	GO:0071944: cell periphery	7.07E-03
5	GO:0032580: Golgi cisterna membrane	7.38E-03
6	GO:0005768: endosome	7.77E-03
7	GO:0005788: endoplasmic reticulum lumen	8.68E-03
8	GO:0005667: transcription factor complex	9.01E-03
9	GO:0005737: cytoplasm	9.47E-03
10	GO:0009707: chloroplast outer membrane	1.01E-02
11	GO:0005743: mitochondrial inner membrane	1.07E-02
12	GO:0005774: vacuolar membrane	1.18E-02
13	GO:0016020: membrane	1.24E-02
14	GO:0090406: pollen tube	1.42E-02
15	GO:0005618: cell wall	1.45E-02
16	GO:0016021: integral component of membrane	1.47E-02
17	GO:0005829: cytosol	1.58E-02
18	GO:0010008: endosome membrane	2.02E-02
19	GO:0005773: vacuole	2.24E-02
20	GO:0005759: mitochondrial matrix	3.11E-02
21	GO:0005802: trans-Golgi network	3.28E-02
22	GO:0009705: plant-type vacuole membrane	3.33E-02
23	GO:0005783: endoplasmic reticulum	3.35E-02