GO Enrichment Analysis of Co-expressed Genes with
AT1G60790
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
2 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
4 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
5 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
6 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
7 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
8 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
9 | GO:1901259: chloroplast rRNA processing | 1.63E-06 |
10 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.46E-06 |
11 | GO:0009657: plastid organization | 5.89E-06 |
12 | GO:0015979: photosynthesis | 9.51E-05 |
13 | GO:0006353: DNA-templated transcription, termination | 2.03E-04 |
14 | GO:0019252: starch biosynthetic process | 2.11E-04 |
15 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.29E-04 |
16 | GO:1904964: positive regulation of phytol biosynthetic process | 2.29E-04 |
17 | GO:0043686: co-translational protein modification | 2.29E-04 |
18 | GO:0000476: maturation of 4.5S rRNA | 2.29E-04 |
19 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.29E-04 |
20 | GO:0000967: rRNA 5'-end processing | 2.29E-04 |
21 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 2.29E-04 |
22 | GO:0032544: plastid translation | 2.51E-04 |
23 | GO:0032502: developmental process | 2.54E-04 |
24 | GO:0010027: thylakoid membrane organization | 3.82E-04 |
25 | GO:0009773: photosynthetic electron transport in photosystem I | 4.90E-04 |
26 | GO:0019684: photosynthesis, light reaction | 4.90E-04 |
27 | GO:0018026: peptidyl-lysine monomethylation | 5.10E-04 |
28 | GO:1904143: positive regulation of carotenoid biosynthetic process | 5.10E-04 |
29 | GO:0051262: protein tetramerization | 5.10E-04 |
30 | GO:0034470: ncRNA processing | 5.10E-04 |
31 | GO:0055114: oxidation-reduction process | 5.12E-04 |
32 | GO:0019853: L-ascorbic acid biosynthetic process | 8.00E-04 |
33 | GO:0015940: pantothenate biosynthetic process | 8.29E-04 |
34 | GO:0005977: glycogen metabolic process | 8.29E-04 |
35 | GO:0006954: inflammatory response | 8.29E-04 |
36 | GO:0034051: negative regulation of plant-type hypersensitive response | 8.29E-04 |
37 | GO:0006168: adenine salvage | 1.18E-03 |
38 | GO:0071786: endoplasmic reticulum tubular network organization | 1.18E-03 |
39 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.18E-03 |
40 | GO:0006166: purine ribonucleoside salvage | 1.18E-03 |
41 | GO:0009152: purine ribonucleotide biosynthetic process | 1.18E-03 |
42 | GO:0046653: tetrahydrofolate metabolic process | 1.18E-03 |
43 | GO:0051016: barbed-end actin filament capping | 1.18E-03 |
44 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.18E-03 |
45 | GO:0016556: mRNA modification | 1.18E-03 |
46 | GO:0009658: chloroplast organization | 1.56E-03 |
47 | GO:0010021: amylopectin biosynthetic process | 1.57E-03 |
48 | GO:0009765: photosynthesis, light harvesting | 1.57E-03 |
49 | GO:0006021: inositol biosynthetic process | 1.57E-03 |
50 | GO:0032543: mitochondrial translation | 2.01E-03 |
51 | GO:0006564: L-serine biosynthetic process | 2.01E-03 |
52 | GO:0031365: N-terminal protein amino acid modification | 2.01E-03 |
53 | GO:0044209: AMP salvage | 2.01E-03 |
54 | GO:0006465: signal peptide processing | 2.01E-03 |
55 | GO:0050665: hydrogen peroxide biosynthetic process | 2.48E-03 |
56 | GO:0032973: amino acid export | 2.48E-03 |
57 | GO:0000741: karyogamy | 2.48E-03 |
58 | GO:0010190: cytochrome b6f complex assembly | 2.48E-03 |
59 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.48E-03 |
60 | GO:0046855: inositol phosphate dephosphorylation | 2.48E-03 |
61 | GO:0048280: vesicle fusion with Golgi apparatus | 2.97E-03 |
62 | GO:0009854: oxidative photosynthetic carbon pathway | 2.97E-03 |
63 | GO:0009955: adaxial/abaxial pattern specification | 2.97E-03 |
64 | GO:0009772: photosynthetic electron transport in photosystem II | 3.50E-03 |
65 | GO:0043090: amino acid import | 3.50E-03 |
66 | GO:0051693: actin filament capping | 3.50E-03 |
67 | GO:0009769: photosynthesis, light harvesting in photosystem II | 3.50E-03 |
68 | GO:0009645: response to low light intensity stimulus | 3.50E-03 |
69 | GO:0015995: chlorophyll biosynthetic process | 4.01E-03 |
70 | GO:0010078: maintenance of root meristem identity | 4.06E-03 |
71 | GO:0007155: cell adhesion | 4.06E-03 |
72 | GO:0042255: ribosome assembly | 4.06E-03 |
73 | GO:0018298: protein-chromophore linkage | 4.44E-03 |
74 | GO:0010204: defense response signaling pathway, resistance gene-independent | 4.65E-03 |
75 | GO:0043562: cellular response to nitrogen levels | 4.65E-03 |
76 | GO:0017004: cytochrome complex assembly | 4.65E-03 |
77 | GO:0046685: response to arsenic-containing substance | 5.27E-03 |
78 | GO:0009821: alkaloid biosynthetic process | 5.27E-03 |
79 | GO:0080144: amino acid homeostasis | 5.27E-03 |
80 | GO:0046916: cellular transition metal ion homeostasis | 5.27E-03 |
81 | GO:0005982: starch metabolic process | 5.91E-03 |
82 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.91E-03 |
83 | GO:0045036: protein targeting to chloroplast | 6.58E-03 |
84 | GO:0006896: Golgi to vacuole transport | 6.58E-03 |
85 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.58E-03 |
86 | GO:0010114: response to red light | 7.25E-03 |
87 | GO:0009684: indoleacetic acid biosynthetic process | 7.28E-03 |
88 | GO:0009089: lysine biosynthetic process via diaminopimelate | 7.28E-03 |
89 | GO:0006415: translational termination | 7.28E-03 |
90 | GO:0006790: sulfur compound metabolic process | 8.00E-03 |
91 | GO:0030036: actin cytoskeleton organization | 8.75E-03 |
92 | GO:0009767: photosynthetic electron transport chain | 8.75E-03 |
93 | GO:0010588: cotyledon vascular tissue pattern formation | 8.75E-03 |
94 | GO:0030048: actin filament-based movement | 8.75E-03 |
95 | GO:0009416: response to light stimulus | 9.37E-03 |
96 | GO:0007015: actin filament organization | 9.52E-03 |
97 | GO:0048467: gynoecium development | 9.52E-03 |
98 | GO:0010207: photosystem II assembly | 9.52E-03 |
99 | GO:0046854: phosphatidylinositol phosphorylation | 1.03E-02 |
100 | GO:0080167: response to karrikin | 1.03E-02 |
101 | GO:0048367: shoot system development | 1.20E-02 |
102 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.28E-02 |
103 | GO:0006418: tRNA aminoacylation for protein translation | 1.28E-02 |
104 | GO:0019915: lipid storage | 1.37E-02 |
105 | GO:0009269: response to desiccation | 1.37E-02 |
106 | GO:0009409: response to cold | 1.39E-02 |
107 | GO:0019748: secondary metabolic process | 1.46E-02 |
108 | GO:0016226: iron-sulfur cluster assembly | 1.46E-02 |
109 | GO:0006012: galactose metabolic process | 1.56E-02 |
110 | GO:0009686: gibberellin biosynthetic process | 1.56E-02 |
111 | GO:0006810: transport | 1.60E-02 |
112 | GO:0009306: protein secretion | 1.65E-02 |
113 | GO:0005975: carbohydrate metabolic process | 1.69E-02 |
114 | GO:0016117: carotenoid biosynthetic process | 1.75E-02 |
115 | GO:0042147: retrograde transport, endosome to Golgi | 1.75E-02 |
116 | GO:0080022: primary root development | 1.85E-02 |
117 | GO:0009058: biosynthetic process | 1.85E-02 |
118 | GO:0010087: phloem or xylem histogenesis | 1.85E-02 |
119 | GO:0006662: glycerol ether metabolic process | 1.95E-02 |
120 | GO:0010197: polar nucleus fusion | 1.95E-02 |
121 | GO:0009741: response to brassinosteroid | 1.95E-02 |
122 | GO:0010268: brassinosteroid homeostasis | 1.95E-02 |
123 | GO:0009958: positive gravitropism | 1.95E-02 |
124 | GO:0015986: ATP synthesis coupled proton transport | 2.05E-02 |
125 | GO:0009646: response to absence of light | 2.05E-02 |
126 | GO:0009851: auxin biosynthetic process | 2.16E-02 |
127 | GO:0006623: protein targeting to vacuole | 2.16E-02 |
128 | GO:0048825: cotyledon development | 2.16E-02 |
129 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.27E-02 |
130 | GO:0016132: brassinosteroid biosynthetic process | 2.27E-02 |
131 | GO:1901657: glycosyl compound metabolic process | 2.48E-02 |
132 | GO:0016125: sterol metabolic process | 2.60E-02 |
133 | GO:0008380: RNA splicing | 2.89E-02 |
134 | GO:0009735: response to cytokinin | 3.11E-02 |
135 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.31E-02 |
136 | GO:0016311: dephosphorylation | 3.43E-02 |
137 | GO:0009817: defense response to fungus, incompatible interaction | 3.56E-02 |
138 | GO:0009813: flavonoid biosynthetic process | 3.68E-02 |
139 | GO:0010218: response to far red light | 3.81E-02 |
140 | GO:0048527: lateral root development | 3.94E-02 |
141 | GO:0009637: response to blue light | 4.21E-02 |
142 | GO:0009853: photorespiration | 4.21E-02 |
143 | GO:0034599: cellular response to oxidative stress | 4.34E-02 |
144 | GO:0006839: mitochondrial transport | 4.62E-02 |
145 | GO:0030001: metal ion transport | 4.62E-02 |
146 | GO:0055085: transmembrane transport | 4.66E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
2 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
3 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
4 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
5 | GO:0009011: starch synthase activity | 3.72E-05 |
6 | GO:0004033: aldo-keto reductase (NADP) activity | 2.03E-04 |
7 | GO:0005080: protein kinase C binding | 2.29E-04 |
8 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.29E-04 |
9 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.29E-04 |
10 | GO:0005227: calcium activated cation channel activity | 2.29E-04 |
11 | GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 2.29E-04 |
12 | GO:0051777: ent-kaurenoate oxidase activity | 2.29E-04 |
13 | GO:0004856: xylulokinase activity | 2.29E-04 |
14 | GO:0042586: peptide deformylase activity | 2.29E-04 |
15 | GO:0019843: rRNA binding | 4.96E-04 |
16 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 5.10E-04 |
17 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.10E-04 |
18 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.10E-04 |
19 | GO:0033201: alpha-1,4-glucan synthase activity | 5.10E-04 |
20 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 5.10E-04 |
21 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.10E-04 |
22 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.10E-04 |
23 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 5.10E-04 |
24 | GO:0019156: isoamylase activity | 5.10E-04 |
25 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 5.10E-04 |
26 | GO:0004751: ribose-5-phosphate isomerase activity | 8.29E-04 |
27 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 8.29E-04 |
28 | GO:0070402: NADPH binding | 8.29E-04 |
29 | GO:0008864: formyltetrahydrofolate deformylase activity | 8.29E-04 |
30 | GO:0004373: glycogen (starch) synthase activity | 8.29E-04 |
31 | GO:0002161: aminoacyl-tRNA editing activity | 8.29E-04 |
32 | GO:0004148: dihydrolipoyl dehydrogenase activity | 8.29E-04 |
33 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.18E-03 |
34 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.18E-03 |
35 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.18E-03 |
36 | GO:0003999: adenine phosphoribosyltransferase activity | 1.18E-03 |
37 | GO:0016851: magnesium chelatase activity | 1.18E-03 |
38 | GO:0016149: translation release factor activity, codon specific | 1.18E-03 |
39 | GO:0003727: single-stranded RNA binding | 1.52E-03 |
40 | GO:0008891: glycolate oxidase activity | 1.57E-03 |
41 | GO:0016279: protein-lysine N-methyltransferase activity | 1.57E-03 |
42 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.57E-03 |
43 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.57E-03 |
44 | GO:0080032: methyl jasmonate esterase activity | 1.57E-03 |
45 | GO:0045430: chalcone isomerase activity | 1.57E-03 |
46 | GO:0043495: protein anchor | 1.57E-03 |
47 | GO:0016788: hydrolase activity, acting on ester bonds | 1.61E-03 |
48 | GO:0016846: carbon-sulfur lyase activity | 2.01E-03 |
49 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.01E-03 |
50 | GO:0080030: methyl indole-3-acetate esterase activity | 2.48E-03 |
51 | GO:0004556: alpha-amylase activity | 2.48E-03 |
52 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.97E-03 |
53 | GO:0008195: phosphatidate phosphatase activity | 2.97E-03 |
54 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.97E-03 |
55 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.97E-03 |
56 | GO:0005261: cation channel activity | 2.97E-03 |
57 | GO:0019899: enzyme binding | 3.50E-03 |
58 | GO:0016168: chlorophyll binding | 3.60E-03 |
59 | GO:0046914: transition metal ion binding | 4.65E-03 |
60 | GO:0003747: translation release factor activity | 5.27E-03 |
61 | GO:0003993: acid phosphatase activity | 5.88E-03 |
62 | GO:0016844: strictosidine synthase activity | 5.91E-03 |
63 | GO:0004185: serine-type carboxypeptidase activity | 7.25E-03 |
64 | GO:0008559: xenobiotic-transporting ATPase activity | 7.28E-03 |
65 | GO:0047372: acylglycerol lipase activity | 7.28E-03 |
66 | GO:0008378: galactosyltransferase activity | 8.00E-03 |
67 | GO:0003725: double-stranded RNA binding | 8.75E-03 |
68 | GO:0004022: alcohol dehydrogenase (NAD) activity | 8.75E-03 |
69 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 9.52E-03 |
70 | GO:0003774: motor activity | 9.52E-03 |
71 | GO:0008266: poly(U) RNA binding | 9.52E-03 |
72 | GO:0003824: catalytic activity | 9.66E-03 |
73 | GO:0003690: double-stranded DNA binding | 1.01E-02 |
74 | GO:0031409: pigment binding | 1.11E-02 |
75 | GO:0051536: iron-sulfur cluster binding | 1.20E-02 |
76 | GO:0005528: FK506 binding | 1.20E-02 |
77 | GO:0022891: substrate-specific transmembrane transporter activity | 1.56E-02 |
78 | GO:0047134: protein-disulfide reductase activity | 1.75E-02 |
79 | GO:0004812: aminoacyl-tRNA ligase activity | 1.75E-02 |
80 | GO:0009055: electron carrier activity | 1.85E-02 |
81 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.95E-02 |
82 | GO:0005525: GTP binding | 1.98E-02 |
83 | GO:0004791: thioredoxin-disulfide reductase activity | 2.05E-02 |
84 | GO:0010181: FMN binding | 2.05E-02 |
85 | GO:0008565: protein transporter activity | 2.10E-02 |
86 | GO:0048038: quinone binding | 2.27E-02 |
87 | GO:0003723: RNA binding | 2.37E-02 |
88 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.48E-02 |
89 | GO:0016597: amino acid binding | 2.83E-02 |
90 | GO:0016787: hydrolase activity | 3.02E-02 |
91 | GO:0042802: identical protein binding | 3.07E-02 |
92 | GO:0102483: scopolin beta-glucosidase activity | 3.31E-02 |
93 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.56E-02 |
94 | GO:0008168: methyltransferase activity | 3.60E-02 |
95 | GO:0015238: drug transmembrane transporter activity | 3.68E-02 |
96 | GO:0004601: peroxidase activity | 3.74E-02 |
97 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.94E-02 |
98 | GO:0016491: oxidoreductase activity | 4.02E-02 |
99 | GO:0050660: flavin adenine dinucleotide binding | 4.32E-02 |
100 | GO:0000149: SNARE binding | 4.48E-02 |
101 | GO:0008422: beta-glucosidase activity | 4.48E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009571: proplastid stroma | 0.00E+00 |
2 | GO:0009507: chloroplast | 6.68E-24 |
3 | GO:0009535: chloroplast thylakoid membrane | 1.03E-12 |
4 | GO:0009570: chloroplast stroma | 1.83E-11 |
5 | GO:0009579: thylakoid | 4.51E-06 |
6 | GO:0005787: signal peptidase complex | 2.29E-04 |
7 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.29E-04 |
8 | GO:0009547: plastid ribosome | 2.29E-04 |
9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.04E-04 |
10 | GO:0009543: chloroplast thylakoid lumen | 4.96E-04 |
11 | GO:0008290: F-actin capping protein complex | 5.10E-04 |
12 | GO:0010007: magnesium chelatase complex | 8.29E-04 |
13 | GO:0033281: TAT protein transport complex | 8.29E-04 |
14 | GO:0009534: chloroplast thylakoid | 8.62E-04 |
15 | GO:0031977: thylakoid lumen | 8.99E-04 |
16 | GO:0009941: chloroplast envelope | 1.03E-03 |
17 | GO:0009654: photosystem II oxygen evolving complex | 1.08E-03 |
18 | GO:0071782: endoplasmic reticulum tubular network | 1.18E-03 |
19 | GO:0042646: plastid nucleoid | 1.18E-03 |
20 | GO:0030658: transport vesicle membrane | 1.18E-03 |
21 | GO:0009517: PSII associated light-harvesting complex II | 1.57E-03 |
22 | GO:0009522: photosystem I | 2.06E-03 |
23 | GO:0031969: chloroplast membrane | 2.17E-03 |
24 | GO:0009523: photosystem II | 2.21E-03 |
25 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.48E-03 |
26 | GO:0009295: nucleoid | 3.04E-03 |
27 | GO:0012507: ER to Golgi transport vesicle membrane | 4.06E-03 |
28 | GO:0009501: amyloplast | 4.06E-03 |
29 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 4.06E-03 |
30 | GO:0009707: chloroplast outer membrane | 4.44E-03 |
31 | GO:0009539: photosystem II reaction center | 4.65E-03 |
32 | GO:0005763: mitochondrial small ribosomal subunit | 5.27E-03 |
33 | GO:0042644: chloroplast nucleoid | 5.27E-03 |
34 | GO:0016459: myosin complex | 6.58E-03 |
35 | GO:0000311: plastid large ribosomal subunit | 8.00E-03 |
36 | GO:0009508: plastid chromosome | 8.75E-03 |
37 | GO:0030095: chloroplast photosystem II | 9.52E-03 |
38 | GO:0030076: light-harvesting complex | 1.03E-02 |
39 | GO:0042651: thylakoid membrane | 1.28E-02 |
40 | GO:0009706: chloroplast inner membrane | 1.40E-02 |
41 | GO:0016021: integral component of membrane | 1.63E-02 |
42 | GO:0010287: plastoglobule | 1.66E-02 |
43 | GO:0005789: endoplasmic reticulum membrane | 1.71E-02 |
44 | GO:0019898: extrinsic component of membrane | 2.16E-02 |
45 | GO:0010319: stromule | 2.71E-02 |
46 | GO:0005840: ribosome | 2.89E-02 |
47 | GO:0030529: intracellular ribonucleoprotein complex | 2.94E-02 |
48 | GO:0046658: anchored component of plasma membrane | 3.20E-02 |
49 | GO:0000325: plant-type vacuole | 3.94E-02 |
50 | GO:0031201: SNARE complex | 4.76E-02 |
51 | GO:0031902: late endosome membrane | 4.76E-02 |