Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G60000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015801: aromatic amino acid transport2.32E-06
2GO:0043255: regulation of carbohydrate biosynthetic process6.50E-06
3GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.94E-05
4GO:0071483: cellular response to blue light2.77E-05
5GO:0010337: regulation of salicylic acid metabolic process4.74E-05
6GO:0048564: photosystem I assembly8.28E-05
7GO:0071482: cellular response to light stimulus9.62E-05
8GO:0006032: chitin catabolic process1.39E-04
9GO:0006352: DNA-templated transcription, initiation1.54E-04
10GO:0090351: seedling development2.20E-04
11GO:0010053: root epidermal cell differentiation2.20E-04
12GO:0009825: multidimensional cell growth2.20E-04
13GO:0010167: response to nitrate2.20E-04
14GO:0003333: amino acid transmembrane transport2.90E-04
15GO:0016998: cell wall macromolecule catabolic process2.90E-04
16GO:0016226: iron-sulfur cluster assembly3.08E-04
17GO:0010197: polar nucleus fusion4.04E-04
18GO:0030244: cellulose biosynthetic process6.99E-04
19GO:0006865: amino acid transport7.90E-04
20GO:0009809: lignin biosynthetic process1.16E-03
21GO:0006096: glycolytic process1.29E-03
22GO:0009658: chloroplast organization2.80E-03
23GO:0015979: photosynthesis3.55E-03
24GO:0009408: response to heat4.23E-03
25GO:0009873: ethylene-activated signaling pathway5.03E-03
26GO:0009735: response to cytokinin5.89E-03
27GO:0045893: positive regulation of transcription, DNA-templated6.90E-03
28GO:0009414: response to water deprivation1.01E-02
29GO:0006810: transport1.35E-02
30GO:0009793: embryo development ending in seed dormancy1.86E-02
31GO:0009651: response to salt stress2.43E-02
RankGO TermAdjusted P value
1GO:0015173: aromatic amino acid transmembrane transporter activity6.50E-06
2GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity1.23E-05
3GO:0008430: selenium binding1.23E-05
4GO:0032947: protein complex scaffold1.23E-05
5GO:0001053: plastid sigma factor activity2.77E-05
6GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.77E-05
7GO:0016987: sigma factor activity2.77E-05
8GO:0005275: amine transmembrane transporter activity3.71E-05
9GO:0004568: chitinase activity1.39E-04
10GO:0051536: iron-sulfur cluster binding2.54E-04
11GO:0048038: quinone binding4.64E-04
12GO:0030247: polysaccharide binding6.55E-04
13GO:0005198: structural molecule activity1.03E-03
14GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.16E-03
15GO:0005506: iron ion binding1.01E-02
RankGO TermAdjusted P value
1GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex2.32E-06
2GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.10E-04
3GO:0009507: chloroplast9.47E-04
4GO:0009706: chloroplast inner membrane1.46E-03
5GO:0005887: integral component of plasma membrane5.21E-03
6GO:0031225: anchored component of membrane8.55E-03
7GO:0009536: plastid1.19E-02
8GO:0009535: chloroplast thylakoid membrane1.82E-02
9GO:0048046: apoplast2.57E-02
10GO:0009570: chloroplast stroma3.92E-02
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Gene type



Gene DE type