GO Enrichment Analysis of Co-expressed Genes with
AT1G59920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 2 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
| 3 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
| 4 | GO:0080029: cellular response to boron-containing substance levels | 1.07E-04 |
| 5 | GO:0006898: receptor-mediated endocytosis | 1.07E-04 |
| 6 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.70E-04 |
| 7 | GO:0046713: borate transport | 2.70E-04 |
| 8 | GO:0006020: inositol metabolic process | 2.70E-04 |
| 9 | GO:0032502: developmental process | 2.83E-04 |
| 10 | GO:0006021: inositol biosynthetic process | 3.64E-04 |
| 11 | GO:0071483: cellular response to blue light | 3.64E-04 |
| 12 | GO:0009765: photosynthesis, light harvesting | 3.64E-04 |
| 13 | GO:0009904: chloroplast accumulation movement | 4.63E-04 |
| 14 | GO:0009643: photosynthetic acclimation | 5.67E-04 |
| 15 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 5.67E-04 |
| 16 | GO:0042549: photosystem II stabilization | 5.67E-04 |
| 17 | GO:0046855: inositol phosphate dephosphorylation | 5.67E-04 |
| 18 | GO:0009903: chloroplast avoidance movement | 6.76E-04 |
| 19 | GO:0015979: photosynthesis | 7.03E-04 |
| 20 | GO:0009645: response to low light intensity stimulus | 7.90E-04 |
| 21 | GO:0010196: nonphotochemical quenching | 7.90E-04 |
| 22 | GO:0009769: photosynthesis, light harvesting in photosystem II | 7.90E-04 |
| 23 | GO:0010114: response to red light | 7.97E-04 |
| 24 | GO:0042255: ribosome assembly | 9.08E-04 |
| 25 | GO:0006353: DNA-templated transcription, termination | 9.08E-04 |
| 26 | GO:0015996: chlorophyll catabolic process | 1.03E-03 |
| 27 | GO:0006364: rRNA processing | 1.06E-03 |
| 28 | GO:0009821: alkaloid biosynthetic process | 1.16E-03 |
| 29 | GO:0005982: starch metabolic process | 1.29E-03 |
| 30 | GO:0009641: shade avoidance | 1.43E-03 |
| 31 | GO:0006790: sulfur compound metabolic process | 1.72E-03 |
| 32 | GO:0010207: photosystem II assembly | 2.03E-03 |
| 33 | GO:0007015: actin filament organization | 2.03E-03 |
| 34 | GO:0010223: secondary shoot formation | 2.03E-03 |
| 35 | GO:0046854: phosphatidylinositol phosphorylation | 2.19E-03 |
| 36 | GO:0080147: root hair cell development | 2.52E-03 |
| 37 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.70E-03 |
| 38 | GO:0009269: response to desiccation | 2.88E-03 |
| 39 | GO:0000413: protein peptidyl-prolyl isomerization | 3.82E-03 |
| 40 | GO:0019252: starch biosynthetic process | 4.43E-03 |
| 41 | GO:0009630: gravitropism | 4.86E-03 |
| 42 | GO:1901657: glycosyl compound metabolic process | 5.07E-03 |
| 43 | GO:0016126: sterol biosynthetic process | 5.98E-03 |
| 44 | GO:0032259: methylation | 6.78E-03 |
| 45 | GO:0018298: protein-chromophore linkage | 7.19E-03 |
| 46 | GO:0009813: flavonoid biosynthetic process | 7.43E-03 |
| 47 | GO:0010218: response to far red light | 7.69E-03 |
| 48 | GO:0009637: response to blue light | 8.47E-03 |
| 49 | GO:0051707: response to other organism | 1.01E-02 |
| 50 | GO:0009644: response to high light intensity | 1.07E-02 |
| 51 | GO:0006813: potassium ion transport | 1.25E-02 |
| 52 | GO:0009416: response to light stimulus | 1.26E-02 |
| 53 | GO:0010224: response to UV-B | 1.28E-02 |
| 54 | GO:0009611: response to wounding | 1.29E-02 |
| 55 | GO:0006457: protein folding | 1.63E-02 |
| 56 | GO:0009058: biosynthetic process | 1.95E-02 |
| 57 | GO:0055114: oxidation-reduction process | 2.08E-02 |
| 58 | GO:0008380: RNA splicing | 2.68E-02 |
| 59 | GO:0009658: chloroplast organization | 3.22E-02 |
| 60 | GO:0042254: ribosome biogenesis | 3.27E-02 |
| 61 | GO:0009409: response to cold | 3.46E-02 |
| 62 | GO:0006810: transport | 3.75E-02 |
| 63 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.85E-02 |
| 64 | GO:0045454: cell redox homeostasis | 4.27E-02 |
| 65 | GO:0009408: response to heat | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 2 | GO:0034256: chlorophyll(ide) b reductase activity | 4.31E-05 |
| 3 | GO:0015168: glycerol transmembrane transporter activity | 4.31E-05 |
| 4 | GO:0045486: naringenin 3-dioxygenase activity | 4.31E-05 |
| 5 | GO:0035671: enone reductase activity | 4.31E-05 |
| 6 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.07E-04 |
| 7 | GO:0033201: alpha-1,4-glucan synthase activity | 1.07E-04 |
| 8 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.07E-04 |
| 9 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.07E-04 |
| 10 | GO:0004751: ribose-5-phosphate isomerase activity | 1.84E-04 |
| 11 | GO:0004373: glycogen (starch) synthase activity | 1.84E-04 |
| 12 | GO:0022890: inorganic cation transmembrane transporter activity | 2.70E-04 |
| 13 | GO:0046715: borate transmembrane transporter activity | 2.70E-04 |
| 14 | GO:0009011: starch synthase activity | 3.64E-04 |
| 15 | GO:0015204: urea transmembrane transporter activity | 3.64E-04 |
| 16 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 6.76E-04 |
| 17 | GO:0071949: FAD binding | 1.16E-03 |
| 18 | GO:0016844: strictosidine synthase activity | 1.29E-03 |
| 19 | GO:0015386: potassium:proton antiporter activity | 1.57E-03 |
| 20 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.87E-03 |
| 21 | GO:0031072: heat shock protein binding | 1.87E-03 |
| 22 | GO:0031409: pigment binding | 2.36E-03 |
| 23 | GO:0031418: L-ascorbic acid binding | 2.52E-03 |
| 24 | GO:0015079: potassium ion transmembrane transporter activity | 2.70E-03 |
| 25 | GO:0003727: single-stranded RNA binding | 3.43E-03 |
| 26 | GO:0008168: methyltransferase activity | 3.74E-03 |
| 27 | GO:0015299: solute:proton antiporter activity | 4.23E-03 |
| 28 | GO:0015250: water channel activity | 5.98E-03 |
| 29 | GO:0016168: chlorophyll binding | 6.21E-03 |
| 30 | GO:0102483: scopolin beta-glucosidase activity | 6.69E-03 |
| 31 | GO:0016491: oxidoreductase activity | 6.79E-03 |
| 32 | GO:0003993: acid phosphatase activity | 8.74E-03 |
| 33 | GO:0008422: beta-glucosidase activity | 9.01E-03 |
| 34 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.13E-02 |
| 35 | GO:0003690: double-stranded DNA binding | 1.28E-02 |
| 36 | GO:0051082: unfolded protein binding | 1.60E-02 |
| 37 | GO:0019843: rRNA binding | 1.88E-02 |
| 38 | GO:0004252: serine-type endopeptidase activity | 2.02E-02 |
| 39 | GO:0016788: hydrolase activity, acting on ester bonds | 3.27E-02 |
| 40 | GO:0004672: protein kinase activity | 3.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.65E-09 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 6.83E-08 |
| 4 | GO:0009534: chloroplast thylakoid | 3.00E-06 |
| 5 | GO:0009579: thylakoid | 4.29E-05 |
| 6 | GO:0009941: chloroplast envelope | 1.05E-04 |
| 7 | GO:0009570: chloroplast stroma | 2.45E-04 |
| 8 | GO:0009517: PSII associated light-harvesting complex II | 3.64E-04 |
| 9 | GO:0031977: thylakoid lumen | 7.37E-04 |
| 10 | GO:0031982: vesicle | 9.08E-04 |
| 11 | GO:0009501: amyloplast | 9.08E-04 |
| 12 | GO:0010287: plastoglobule | 1.75E-03 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 1.84E-03 |
| 14 | GO:0009508: plastid chromosome | 1.87E-03 |
| 15 | GO:0030076: light-harvesting complex | 2.19E-03 |
| 16 | GO:0042651: thylakoid membrane | 2.70E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 2.70E-03 |
| 18 | GO:0009522: photosystem I | 4.23E-03 |
| 19 | GO:0009523: photosystem II | 4.43E-03 |
| 20 | GO:0019898: extrinsic component of membrane | 4.43E-03 |
| 21 | GO:0010319: stromule | 5.52E-03 |
| 22 | GO:0009295: nucleoid | 5.52E-03 |
| 23 | GO:0005623: cell | 1.91E-02 |
| 24 | GO:0009705: plant-type vacuole membrane | 2.36E-02 |
| 25 | GO:0031969: chloroplast membrane | 3.76E-02 |