co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G59710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0010398: xylogalacturonan metabolic process	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0071985: multivesicular body sorting pathway	0.00E+00
5	GO:0006903: vesicle targeting	0.00E+00
6	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
7	GO:0080149: sucrose induced translational repression	0.00E+00
8	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
9	GO:0016192: vesicle-mediated transport	6.49E-07
10	GO:0006680: glucosylceramide catabolic process	2.27E-04
11	GO:0006083: acetate metabolic process	2.27E-04
12	GO:0042350: GDP-L-fucose biosynthetic process	2.27E-04
13	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.27E-04
14	GO:0019478: D-amino acid catabolic process	2.27E-04
15	GO:0015709: thiosulfate transport	5.05E-04
16	GO:0071422: succinate transmembrane transport	5.05E-04
17	GO:0009805: coumarin biosynthetic process	5.05E-04
18	GO:0042853: L-alanine catabolic process	5.05E-04
19	GO:0080026: response to indolebutyric acid	5.05E-04
20	GO:0055046: microgametogenesis	6.27E-04
21	GO:0007033: vacuole organization	7.89E-04
22	GO:0061158: 3'-UTR-mediated mRNA destabilization	8.21E-04
23	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	8.21E-04
24	GO:0010253: UDP-rhamnose biosynthetic process	8.21E-04
25	GO:0010272: response to silver ion	8.21E-04
26	GO:0009062: fatty acid catabolic process	8.21E-04
27	GO:0000162: tryptophan biosynthetic process	8.76E-04
28	GO:0055114: oxidation-reduction process	1.05E-03
29	GO:0015031: protein transport	1.10E-03
30	GO:0009636: response to toxic substance	1.13E-03
31	GO:0080024: indolebutyric acid metabolic process	1.17E-03
32	GO:0055070: copper ion homeostasis	1.17E-03
33	GO:0001676: long-chain fatty acid metabolic process	1.17E-03
34	GO:0015729: oxaloacetate transport	1.17E-03
35	GO:0009226: nucleotide-sugar biosynthetic process	1.17E-03
36	GO:0006612: protein targeting to membrane	1.17E-03
37	GO:0006893: Golgi to plasma membrane transport	1.17E-03
38	GO:1902584: positive regulation of response to water deprivation	1.56E-03
39	GO:0006621: protein retention in ER lumen	1.56E-03
40	GO:0006564: L-serine biosynthetic process	1.99E-03
41	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.99E-03
42	GO:0045927: positive regulation of growth	1.99E-03
43	GO:0071423: malate transmembrane transport	1.99E-03
44	GO:0006623: protein targeting to vacuole	2.18E-03
45	GO:0006555: methionine metabolic process	2.45E-03
46	GO:0010315: auxin efflux	2.45E-03
47	GO:0035435: phosphate ion transmembrane transport	2.45E-03
48	GO:0006886: intracellular protein transport	2.92E-03
49	GO:0009099: valine biosynthetic process	2.94E-03
50	GO:0080113: regulation of seed growth	2.94E-03
51	GO:0019509: L-methionine salvage from methylthioadenosine	2.94E-03
52	GO:0030643: cellular phosphate ion homeostasis	2.94E-03
53	GO:0034389: lipid particle organization	2.94E-03
54	GO:0009082: branched-chain amino acid biosynthetic process	2.94E-03
55	GO:0017148: negative regulation of translation	2.94E-03
56	GO:0006744: ubiquinone biosynthetic process	3.47E-03
57	GO:0080186: developmental vegetative growth	3.47E-03
58	GO:0071669: plant-type cell wall organization or biogenesis	3.47E-03
59	GO:0008272: sulfate transport	3.47E-03
60	GO:0006605: protein targeting	4.02E-03
61	GO:0006102: isocitrate metabolic process	4.02E-03
62	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.02E-03
63	GO:0009819: drought recovery	4.02E-03
64	GO:0009097: isoleucine biosynthetic process	4.60E-03
65	GO:0006972: hyperosmotic response	4.60E-03
66	GO:0048767: root hair elongation	4.60E-03
67	GO:0009699: phenylpropanoid biosynthetic process	4.60E-03
68	GO:0006002: fructose 6-phosphate metabolic process	4.60E-03
69	GO:0015996: chlorophyll catabolic process	4.60E-03
70	GO:0060321: acceptance of pollen	4.60E-03
71	GO:0009407: toxin catabolic process	4.82E-03
72	GO:0009835: fruit ripening	5.22E-03
73	GO:0009098: leucine biosynthetic process	5.85E-03
74	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.85E-03
75	GO:0000103: sulfate assimilation	6.51E-03
76	GO:0006032: chitin catabolic process	6.51E-03
77	GO:0009688: abscisic acid biosynthetic process	6.51E-03
78	GO:0051555: flavonol biosynthetic process	6.51E-03
79	GO:0006887: exocytosis	6.58E-03
80	GO:0006631: fatty acid metabolic process	6.58E-03
81	GO:0000272: polysaccharide catabolic process	7.20E-03
82	GO:0000209: protein polyubiquitination	7.43E-03
83	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	8.66E-03
84	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	8.66E-03
85	GO:0090351: seedling development	1.02E-02
86	GO:0010053: root epidermal cell differentiation	1.02E-02
87	GO:0009225: nucleotide-sugar metabolic process	1.02E-02
88	GO:0007030: Golgi organization	1.02E-02
89	GO:0009825: multidimensional cell growth	1.02E-02
90	GO:0034976: response to endoplasmic reticulum stress	1.10E-02
91	GO:0030150: protein import into mitochondrial matrix	1.19E-02
92	GO:0008299: isoprenoid biosynthetic process	1.27E-02
93	GO:0006457: protein folding	1.35E-02
94	GO:0016998: cell wall macromolecule catabolic process	1.36E-02
95	GO:0019915: lipid storage	1.36E-02
96	GO:0030433: ubiquitin-dependent ERAD pathway	1.45E-02
97	GO:0019748: secondary metabolic process	1.45E-02
98	GO:0030245: cellulose catabolic process	1.45E-02
99	GO:0009411: response to UV	1.54E-02
100	GO:0009306: protein secretion	1.64E-02
101	GO:0009561: megagametogenesis	1.64E-02
102	GO:0042127: regulation of cell proliferation	1.64E-02
103	GO:0046686: response to cadmium ion	1.72E-02
104	GO:0042631: cellular response to water deprivation	1.83E-02
105	GO:0006662: glycerol ether metabolic process	1.93E-02
106	GO:0045489: pectin biosynthetic process	1.93E-02
107	GO:0009851: auxin biosynthetic process	2.14E-02
108	GO:0006635: fatty acid beta-oxidation	2.24E-02
109	GO:0010193: response to ozone	2.24E-02
110	GO:0016032: viral process	2.35E-02
111	GO:0010150: leaf senescence	2.38E-02
112	GO:0007275: multicellular organism development	2.55E-02
113	GO:0009567: double fertilization forming a zygote and endosperm	2.57E-02
114	GO:0019760: glucosinolate metabolic process	2.57E-02
115	GO:0006464: cellular protein modification process	2.57E-02
116	GO:0006904: vesicle docking involved in exocytosis	2.68E-02
117	GO:0051607: defense response to virus	2.80E-02
118	GO:0009615: response to virus	2.91E-02
119	GO:0001666: response to hypoxia	2.91E-02
120	GO:0009816: defense response to bacterium, incompatible interaction	3.03E-02
121	GO:0009627: systemic acquired resistance	3.15E-02
122	GO:0006906: vesicle fusion	3.15E-02
123	GO:0016311: dephosphorylation	3.40E-02
124	GO:0006499: N-terminal protein myristoylation	3.77E-02
125	GO:0010043: response to zinc ion	3.90E-02
126	GO:0009860: pollen tube growth	3.96E-02
127	GO:0045087: innate immune response	4.17E-02
128	GO:0034599: cellular response to oxidative stress	4.30E-02
129	GO:0006099: tricarboxylic acid cycle	4.30E-02
130	GO:0006839: mitochondrial transport	4.57E-02
131	GO:0042542: response to hydrogen peroxide	4.85E-02
132	GO:0009744: response to sucrose	4.98E-02
133	GO:0051707: response to other organism	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005046: KDEL sequence binding	0.00E+00
2	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
3	GO:0016504: peptidase activator activity	0.00E+00
4	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
5	GO:0070577: lysine-acetylated histone binding	0.00E+00
6	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
7	GO:0008320: protein transmembrane transporter activity	2.58E-06
8	GO:0016229: steroid dehydrogenase activity	2.27E-04
9	GO:0050577: GDP-L-fucose synthase activity	2.27E-04
10	GO:0003987: acetate-CoA ligase activity	2.27E-04
11	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.27E-04
12	GO:0070401: NADP+ binding	2.27E-04
13	GO:0032266: phosphatidylinositol-3-phosphate binding	2.27E-04
14	GO:0102293: pheophytinase b activity	2.27E-04
15	GO:0004348: glucosylceramidase activity	2.27E-04
16	GO:1901677: phosphate transmembrane transporter activity	5.05E-04
17	GO:0047746: chlorophyllase activity	5.05E-04
18	GO:0010297: heteropolysaccharide binding	5.05E-04
19	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.05E-04
20	GO:0004617: phosphoglycerate dehydrogenase activity	5.05E-04
21	GO:0010280: UDP-L-rhamnose synthase activity	5.05E-04
22	GO:0050347: trans-octaprenyltranstransferase activity	5.05E-04
23	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	5.05E-04
24	GO:0000774: adenyl-nucleotide exchange factor activity	5.05E-04
25	GO:0008805: carbon-monoxide oxygenase activity	5.05E-04
26	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.05E-04
27	GO:0015117: thiosulfate transmembrane transporter activity	5.05E-04
28	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	8.21E-04
29	GO:0005310: dicarboxylic acid transmembrane transporter activity	8.21E-04
30	GO:0015141: succinate transmembrane transporter activity	8.21E-04
31	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.17E-03
32	GO:0052656: L-isoleucine transaminase activity	1.17E-03
33	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.17E-03
34	GO:0052654: L-leucine transaminase activity	1.17E-03
35	GO:0017077: oxidative phosphorylation uncoupler activity	1.17E-03
36	GO:0052655: L-valine transaminase activity	1.17E-03
37	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.17E-03
38	GO:0015131: oxaloacetate transmembrane transporter activity	1.17E-03
39	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.17E-03
40	GO:0004659: prenyltransferase activity	1.56E-03
41	GO:0004834: tryptophan synthase activity	1.56E-03
42	GO:0046923: ER retention sequence binding	1.56E-03
43	GO:0004084: branched-chain-amino-acid transaminase activity	1.56E-03
44	GO:0070628: proteasome binding	1.56E-03
45	GO:0004031: aldehyde oxidase activity	1.56E-03
46	GO:0050302: indole-3-acetaldehyde oxidase activity	1.56E-03
47	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.99E-03
48	GO:0004040: amidase activity	1.99E-03
49	GO:0016853: isomerase activity	2.03E-03
50	GO:0035252: UDP-xylosyltransferase activity	2.45E-03
51	GO:0016208: AMP binding	2.45E-03
52	GO:0004656: procollagen-proline 4-dioxygenase activity	2.94E-03
53	GO:0102391: decanoate--CoA ligase activity	2.94E-03
54	GO:0043295: glutathione binding	3.47E-03
55	GO:0004467: long-chain fatty acid-CoA ligase activity	3.47E-03
56	GO:0003872: 6-phosphofructokinase activity	3.47E-03
57	GO:0015140: malate transmembrane transporter activity	3.47E-03
58	GO:0004033: aldo-keto reductase (NADP) activity	4.02E-03
59	GO:0052747: sinapyl alcohol dehydrogenase activity	4.02E-03
60	GO:0004630: phospholipase D activity	4.60E-03
61	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.60E-03
62	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.54E-03
63	GO:0003746: translation elongation factor activity	5.54E-03
64	GO:0045309: protein phosphorylated amino acid binding	5.85E-03
65	GO:0004568: chitinase activity	6.51E-03
66	GO:0004364: glutathione transferase activity	6.86E-03
67	GO:0004161: dimethylallyltranstransferase activity	7.20E-03
68	GO:0019904: protein domain specific binding	7.20E-03
69	GO:0016887: ATPase activity	7.46E-03
70	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.92E-03
71	GO:0015116: sulfate transmembrane transporter activity	7.92E-03
72	GO:0005198: structural molecule activity	8.03E-03
73	GO:0031072: heat shock protein binding	8.66E-03
74	GO:0050660: flavin adenine dinucleotide binding	9.28E-03
75	GO:0003824: catalytic activity	9.41E-03
76	GO:0031624: ubiquitin conjugating enzyme binding	9.42E-03
77	GO:0004867: serine-type endopeptidase inhibitor activity	1.02E-02
78	GO:0008061: chitin binding	1.02E-02
79	GO:0003712: transcription cofactor activity	1.02E-02
80	GO:0031625: ubiquitin protein ligase binding	1.07E-02
81	GO:0061630: ubiquitin protein ligase activity	1.08E-02
82	GO:0051536: iron-sulfur cluster binding	1.19E-02
83	GO:0031418: L-ascorbic acid binding	1.19E-02
84	GO:0043130: ubiquitin binding	1.19E-02
85	GO:0051087: chaperone binding	1.27E-02
86	GO:0008408: 3'-5' exonuclease activity	1.36E-02
87	GO:0051082: unfolded protein binding	1.38E-02
88	GO:0008810: cellulase activity	1.54E-02
89	GO:0003727: single-stranded RNA binding	1.64E-02
90	GO:0003756: protein disulfide isomerase activity	1.64E-02
91	GO:0047134: protein-disulfide reductase activity	1.73E-02
92	GO:0005102: receptor binding	1.73E-02
93	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.77E-02
94	GO:0030170: pyridoxal phosphate binding	1.92E-02
95	GO:0004527: exonuclease activity	1.93E-02
96	GO:0004791: thioredoxin-disulfide reductase activity	2.03E-02
97	GO:0050662: coenzyme binding	2.03E-02
98	GO:0004872: receptor activity	2.14E-02
99	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.46E-02
100	GO:0016791: phosphatase activity	2.57E-02
101	GO:0005506: iron ion binding	2.58E-02
102	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.68E-02
103	GO:0016597: amino acid binding	2.80E-02
104	GO:0051213: dioxygenase activity	2.91E-02
105	GO:0004806: triglyceride lipase activity	3.27E-02
106	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.52E-02
107	GO:0004601: peroxidase activity	3.68E-02
108	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.90E-02
109	GO:0003993: acid phosphatase activity	4.30E-02
110	GO:0000149: SNARE binding	4.43E-02
111	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.43E-02
112	GO:0030246: carbohydrate binding	4.91E-02
113	GO:0005484: SNAP receptor activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005801: cis-Golgi network	1.19E-04
2	GO:0005789: endoplasmic reticulum membrane	1.28E-04
3	GO:0005783: endoplasmic reticulum	1.43E-04
4	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.57E-04
5	GO:0001405: presequence translocase-associated import motor	2.27E-04
6	GO:0031901: early endosome membrane	3.00E-04
7	GO:0000814: ESCRT II complex	5.05E-04
8	GO:0030134: ER to Golgi transport vesicle	5.05E-04
9	GO:0030130: clathrin coat of trans-Golgi network vesicle	8.21E-04
10	GO:0030132: clathrin coat of coated pit	8.21E-04
11	GO:0005829: cytosol	1.72E-03
12	GO:0005945: 6-phosphofructokinase complex	1.99E-03
13	GO:0016592: mediator complex	2.49E-03
14	GO:0032580: Golgi cisterna membrane	2.82E-03
15	GO:0030173: integral component of Golgi membrane	2.94E-03
16	GO:0009986: cell surface	3.47E-03
17	GO:0005788: endoplasmic reticulum lumen	3.55E-03
18	GO:0005794: Golgi apparatus	3.60E-03
19	GO:0016021: integral component of membrane	3.69E-03
20	GO:0031982: vesicle	4.02E-03
21	GO:0005811: lipid particle	4.60E-03
22	GO:0009514: glyoxysome	4.60E-03
23	GO:0030665: clathrin-coated vesicle membrane	5.85E-03
24	GO:0008540: proteasome regulatory particle, base subcomplex	5.85E-03
25	GO:0017119: Golgi transport complex	6.51E-03
26	GO:0031902: late endosome membrane	6.58E-03
27	GO:0005737: cytoplasm	7.42E-03
28	GO:0005886: plasma membrane	8.18E-03
29	GO:0005769: early endosome	1.10E-02
30	GO:0005839: proteasome core complex	1.36E-02
31	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.64E-02
32	GO:0005623: cell	1.77E-02
33	GO:0005770: late endosome	1.93E-02
34	GO:0005768: endosome	2.26E-02
35	GO:0000145: exocyst	2.35E-02
36	GO:0005615: extracellular space	2.67E-02
37	GO:0009506: plasmodesma	3.46E-02
38	GO:0000151: ubiquitin ligase complex	3.52E-02
39	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.04E-02
40	GO:0031201: SNARE complex	4.71E-02