Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G58200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006480: N-terminal protein amino acid methylation0.00E+00
2GO:0015843: methylammonium transport0.00E+00
3GO:0016118: carotenoid catabolic process0.00E+00
4GO:0015882: L-ascorbic acid transport0.00E+00
5GO:0046467: membrane lipid biosynthetic process6.58E-05
6GO:0006637: acyl-CoA metabolic process6.58E-05
7GO:0065002: intracellular protein transmembrane transport6.58E-05
8GO:0010028: xanthophyll cycle6.58E-05
9GO:0009081: branched-chain amino acid metabolic process6.58E-05
10GO:0043953: protein transport by the Tat complex6.58E-05
11GO:0000476: maturation of 4.5S rRNA6.58E-05
12GO:0000967: rRNA 5'-end processing6.58E-05
13GO:0009658: chloroplast organization1.01E-04
14GO:0016124: xanthophyll catabolic process1.59E-04
15GO:0000256: allantoin catabolic process1.59E-04
16GO:0016121: carotene catabolic process1.59E-04
17GO:0034470: ncRNA processing1.59E-04
18GO:2000030: regulation of response to red or far red light1.59E-04
19GO:0010136: ureide catabolic process2.69E-04
20GO:0005977: glycogen metabolic process2.69E-04
21GO:0015696: ammonium transport3.90E-04
22GO:0071786: endoplasmic reticulum tubular network organization3.90E-04
23GO:0009152: purine ribonucleotide biosynthetic process3.90E-04
24GO:0046653: tetrahydrofolate metabolic process3.90E-04
25GO:0006145: purine nucleobase catabolic process3.90E-04
26GO:0019252: starch biosynthetic process4.26E-04
27GO:0006021: inositol biosynthetic process5.20E-04
28GO:0010021: amylopectin biosynthetic process5.20E-04
29GO:0010037: response to carbon dioxide5.20E-04
30GO:0015976: carbon utilization5.20E-04
31GO:0015689: molybdate ion transport5.20E-04
32GO:0072488: ammonium transmembrane transport5.20E-04
33GO:2000122: negative regulation of stomatal complex development5.20E-04
34GO:0046855: inositol phosphate dephosphorylation8.06E-04
35GO:0071333: cellular response to glucose stimulus9.59E-04
36GO:0034599: cellular response to oxidative stress1.10E-03
37GO:1900056: negative regulation of leaf senescence1.12E-03
38GO:0016559: peroxisome fission1.29E-03
39GO:0070413: trehalose metabolism in response to stress1.29E-03
40GO:0098656: anion transmembrane transport1.65E-03
41GO:0005982: starch metabolic process1.85E-03
42GO:0010380: regulation of chlorophyll biosynthetic process1.85E-03
43GO:0072593: reactive oxygen species metabolic process2.26E-03
44GO:0006790: sulfur compound metabolic process2.48E-03
45GO:0030048: actin filament-based movement2.70E-03
46GO:0010020: chloroplast fission2.93E-03
47GO:0019853: L-ascorbic acid biosynthetic process3.16E-03
48GO:0046854: phosphatidylinositol phosphorylation3.16E-03
49GO:0009833: plant-type primary cell wall biogenesis3.40E-03
50GO:0005992: trehalose biosynthetic process3.65E-03
51GO:0009768: photosynthesis, light harvesting in photosystem I3.90E-03
52GO:0019748: secondary metabolic process4.43E-03
53GO:0071215: cellular response to abscisic acid stimulus4.70E-03
54GO:0006817: phosphate ion transport4.98E-03
55GO:0006520: cellular amino acid metabolic process5.85E-03
56GO:0007059: chromosome segregation6.15E-03
57GO:0019761: glucosinolate biosynthetic process7.08E-03
58GO:0007264: small GTPase mediated signal transduction7.08E-03
59GO:1901657: glycosyl compound metabolic process7.40E-03
60GO:0009567: double fertilization forming a zygote and endosperm7.73E-03
61GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.59E-03
62GO:0010027: thylakoid membrane organization8.74E-03
63GO:0006950: response to stress9.79E-03
64GO:0016311: dephosphorylation1.02E-02
65GO:0030244: cellulose biosynthetic process1.05E-02
66GO:0018298: protein-chromophore linkage1.05E-02
67GO:0010218: response to far red light1.13E-02
68GO:0009407: toxin catabolic process1.13E-02
69GO:0009910: negative regulation of flower development1.17E-02
70GO:0010119: regulation of stomatal movement1.17E-02
71GO:0009637: response to blue light1.24E-02
72GO:0009853: photorespiration1.24E-02
73GO:0009636: response to toxic substance1.62E-02
74GO:0005975: carbohydrate metabolic process1.64E-02
75GO:0009624: response to nematode2.36E-02
76GO:0009058: biosynthetic process2.88E-02
77GO:0040008: regulation of growth3.37E-02
78GO:0007623: circadian rhythm3.49E-02
79GO:0010150: leaf senescence3.49E-02
80GO:0010228: vegetative to reproductive phase transition of meristem3.60E-02
RankGO TermAdjusted P value
1GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
2GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
3GO:0015229: L-ascorbic acid transporter activity0.00E+00
4GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
5GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
6GO:0010347: L-galactose-1-phosphate phosphatase activity6.58E-05
7GO:0005315: inorganic phosphate transmembrane transporter activity1.11E-04
8GO:0019156: isoamylase activity1.59E-04
9GO:0004103: choline kinase activity1.59E-04
10GO:0009977: proton motive force dependent protein transmembrane transporter activity1.59E-04
11GO:0052832: inositol monophosphate 3-phosphatase activity1.59E-04
12GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.59E-04
13GO:0008934: inositol monophosphate 1-phosphatase activity1.59E-04
14GO:0052833: inositol monophosphate 4-phosphatase activity1.59E-04
15GO:0010326: methionine-oxo-acid transaminase activity1.59E-04
16GO:0016742: hydroxymethyl-, formyl- and related transferase activity2.69E-04
17GO:0008864: formyltetrahydrofolate deformylase activity2.69E-04
18GO:0004848: ureidoglycolate hydrolase activity2.69E-04
19GO:0009011: starch synthase activity5.20E-04
20GO:0004084: branched-chain-amino-acid transaminase activity5.20E-04
21GO:0015098: molybdate ion transmembrane transporter activity5.20E-04
22GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity6.60E-04
23GO:0004556: alpha-amylase activity8.06E-04
24GO:0008519: ammonium transmembrane transporter activity8.06E-04
25GO:2001070: starch binding8.06E-04
26GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity9.59E-04
27GO:0003993: acid phosphatase activity1.10E-03
28GO:0019899: enzyme binding1.12E-03
29GO:0047617: acyl-CoA hydrolase activity1.85E-03
30GO:0004089: carbonate dehydratase activity2.70E-03
31GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.93E-03
32GO:0003774: motor activity2.93E-03
33GO:0031409: pigment binding3.40E-03
34GO:0016760: cellulose synthase (UDP-forming) activity4.70E-03
35GO:0008514: organic anion transmembrane transporter activity4.98E-03
36GO:0042802: identical protein binding5.50E-03
37GO:0016787: hydrolase activity6.31E-03
38GO:0016759: cellulose synthase activity7.73E-03
39GO:0016791: phosphatase activity7.73E-03
40GO:0008237: metallopeptidase activity8.06E-03
41GO:0016168: chlorophyll binding9.08E-03
42GO:0102483: scopolin beta-glucosidase activity9.79E-03
43GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.17E-02
44GO:0008422: beta-glucosidase activity1.32E-02
45GO:0004712: protein serine/threonine/tyrosine kinase activity1.32E-02
46GO:0016491: oxidoreductase activity1.37E-02
47GO:0004364: glutathione transferase activity1.45E-02
48GO:0004185: serine-type carboxypeptidase activity1.49E-02
49GO:0004672: protein kinase activity1.57E-02
50GO:0015293: symporter activity1.62E-02
51GO:0003777: microtubule motor activity1.98E-02
52GO:0015171: amino acid transmembrane transporter activity1.98E-02
53GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.12E-02
54GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.88E-02
55GO:0005525: GTP binding3.59E-02
56GO:0008017: microtubule binding3.60E-02
57GO:0016757: transferase activity, transferring glycosyl groups4.48E-02
58GO:0046982: protein heterodimerization activity4.69E-02
59GO:0016788: hydrolase activity, acting on ester bonds4.82E-02
RankGO TermAdjusted P value
1GO:0043235: receptor complex0.00E+00
2GO:0031361: integral component of thylakoid membrane6.58E-05
3GO:0043036: starch grain1.59E-04
4GO:0009507: chloroplast2.34E-04
5GO:0033281: TAT protein transport complex2.69E-04
6GO:0071782: endoplasmic reticulum tubular network3.90E-04
7GO:0005773: vacuole5.64E-04
8GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane1.29E-03
9GO:0016459: myosin complex2.05E-03
10GO:0005765: lysosomal membrane2.26E-03
11GO:0009706: chloroplast inner membrane2.53E-03
12GO:0030076: light-harvesting complex3.16E-03
13GO:0009941: chloroplast envelope5.92E-03
14GO:0009522: photosystem I6.15E-03
15GO:0009523: photosystem II6.45E-03
16GO:0009707: chloroplast outer membrane1.05E-02
17GO:0005819: spindle1.32E-02
18GO:0031902: late endosome membrane1.40E-02
19GO:0005886: plasma membrane1.89E-02
20GO:0010287: plastoglobule2.67E-02
21GO:0009535: chloroplast thylakoid membrane2.68E-02
22GO:0005623: cell2.82E-02
23GO:0009506: plasmodesma3.47E-02
24GO:0005576: extracellular region4.19E-02
25GO:0005774: vacuolar membrane4.58E-02
<
Gene type



Gene DE type