Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G57630

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010324: membrane invagination0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0010055: atrichoblast differentiation0.00E+00
4GO:1902001: fatty acid transmembrane transport0.00E+00
5GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
6GO:1900067: regulation of cellular response to alkaline pH0.00E+00
7GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
8GO:0009312: oligosaccharide biosynthetic process0.00E+00
9GO:0015690: aluminum cation transport0.00E+00
10GO:1900367: positive regulation of defense response to insect0.00E+00
11GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
12GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
13GO:0046865: terpenoid transport0.00E+00
14GO:0060548: negative regulation of cell death1.55E-08
15GO:0009751: response to salicylic acid2.13E-07
16GO:0051707: response to other organism2.15E-06
17GO:0010150: leaf senescence1.32E-05
18GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.71E-05
19GO:0019725: cellular homeostasis1.71E-05
20GO:0009753: response to jasmonic acid1.77E-05
21GO:0009737: response to abscisic acid1.86E-05
22GO:0010200: response to chitin2.13E-05
23GO:0042742: defense response to bacterium2.65E-05
24GO:0006979: response to oxidative stress2.76E-05
25GO:0006952: defense response3.73E-05
26GO:0010186: positive regulation of cellular defense response5.65E-05
27GO:0071456: cellular response to hypoxia6.95E-05
28GO:0009625: response to insect8.21E-05
29GO:0010112: regulation of systemic acquired resistance9.12E-05
30GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.19E-04
31GO:0009867: jasmonic acid mediated signaling pathway1.34E-04
32GO:0045227: capsule polysaccharide biosynthetic process2.03E-04
33GO:0033358: UDP-L-arabinose biosynthetic process2.03E-04
34GO:0009636: response to toxic substance2.84E-04
35GO:0006855: drug transmembrane transport3.05E-04
36GO:0031347: regulation of defense response3.28E-04
37GO:0009643: photosynthetic acclimation4.27E-04
38GO:0009611: response to wounding4.50E-04
39GO:0006468: protein phosphorylation5.24E-04
40GO:0007166: cell surface receptor signaling pathway6.30E-04
41GO:1990542: mitochondrial transmembrane transport6.31E-04
42GO:0032107: regulation of response to nutrient levels6.31E-04
43GO:1902600: hydrogen ion transmembrane transport6.31E-04
44GO:0048508: embryonic meristem development6.31E-04
45GO:0015760: glucose-6-phosphate transport6.31E-04
46GO:0046256: 2,4,6-trinitrotoluene catabolic process6.31E-04
47GO:0043547: positive regulation of GTPase activity6.31E-04
48GO:0019567: arabinose biosynthetic process6.31E-04
49GO:0080173: male-female gamete recognition during double fertilization6.31E-04
50GO:1901183: positive regulation of camalexin biosynthetic process6.31E-04
51GO:0009270: response to humidity6.31E-04
52GO:0033306: phytol metabolic process6.31E-04
53GO:0009700: indole phytoalexin biosynthetic process6.31E-04
54GO:0050691: regulation of defense response to virus by host6.31E-04
55GO:0034214: protein hexamerization6.31E-04
56GO:0042759: long-chain fatty acid biosynthetic process6.31E-04
57GO:0009968: negative regulation of signal transduction6.31E-04
58GO:0031348: negative regulation of defense response7.24E-04
59GO:2000022: regulation of jasmonic acid mediated signaling pathway7.24E-04
60GO:0006012: galactose metabolic process8.09E-04
61GO:2000031: regulation of salicylic acid mediated signaling pathway1.10E-03
62GO:0010120: camalexin biosynthetic process1.10E-03
63GO:0042391: regulation of membrane potential1.10E-03
64GO:0006098: pentose-phosphate shunt1.31E-03
65GO:0009646: response to absence of light1.32E-03
66GO:0015914: phospholipid transport1.36E-03
67GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.36E-03
68GO:0009838: abscission1.36E-03
69GO:0010618: aerenchyma formation1.36E-03
70GO:0006527: arginine catabolic process1.36E-03
71GO:0080181: lateral root branching1.36E-03
72GO:0006024: glycosaminoglycan biosynthetic process1.36E-03
73GO:0055088: lipid homeostasis1.36E-03
74GO:0019521: D-gluconate metabolic process1.36E-03
75GO:0010115: regulation of abscisic acid biosynthetic process1.36E-03
76GO:0015865: purine nucleotide transport1.36E-03
77GO:0010271: regulation of chlorophyll catabolic process1.36E-03
78GO:0015908: fatty acid transport1.36E-03
79GO:0044419: interspecies interaction between organisms1.36E-03
80GO:0009945: radial axis specification1.36E-03
81GO:0015012: heparan sulfate proteoglycan biosynthetic process1.36E-03
82GO:0015712: hexose phosphate transport1.36E-03
83GO:0071668: plant-type cell wall assembly1.36E-03
84GO:0051258: protein polymerization1.36E-03
85GO:0009446: putrescine biosynthetic process1.36E-03
86GO:0009749: response to glucose1.45E-03
87GO:1900426: positive regulation of defense response to bacterium1.55E-03
88GO:0010193: response to ozone1.58E-03
89GO:1903507: negative regulation of nucleic acid-templated transcription2.10E-03
90GO:0015692: lead ion transport2.24E-03
91GO:0015714: phosphoenolpyruvate transport2.24E-03
92GO:0015695: organic cation transport2.24E-03
93GO:0080168: abscisic acid transport2.24E-03
94GO:1900055: regulation of leaf senescence2.24E-03
95GO:0006954: inflammatory response2.24E-03
96GO:0034051: negative regulation of plant-type hypersensitive response2.24E-03
97GO:1900140: regulation of seedling development2.24E-03
98GO:0010498: proteasomal protein catabolic process2.24E-03
99GO:0035436: triose phosphate transmembrane transport2.24E-03
100GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway2.24E-03
101GO:0080163: regulation of protein serine/threonine phosphatase activity2.24E-03
102GO:0045793: positive regulation of cell size2.24E-03
103GO:0009626: plant-type hypersensitive response2.89E-03
104GO:0009266: response to temperature stimulus3.09E-03
105GO:0046836: glycolipid transport3.25E-03
106GO:0010116: positive regulation of abscisic acid biosynthetic process3.25E-03
107GO:0048194: Golgi vesicle budding3.25E-03
108GO:0046902: regulation of mitochondrial membrane permeability3.25E-03
109GO:0010731: protein glutathionylation3.25E-03
110GO:0015696: ammonium transport3.25E-03
111GO:0072583: clathrin-dependent endocytosis3.25E-03
112GO:0051289: protein homotetramerization3.25E-03
113GO:0046513: ceramide biosynthetic process3.25E-03
114GO:0009225: nucleotide-sugar metabolic process3.47E-03
115GO:0050832: defense response to fungus3.83E-03
116GO:0009407: toxin catabolic process4.05E-03
117GO:2000377: regulation of reactive oxygen species metabolic process4.30E-03
118GO:0080147: root hair cell development4.30E-03
119GO:1901141: regulation of lignin biosynthetic process4.38E-03
120GO:0010109: regulation of photosynthesis4.38E-03
121GO:0048638: regulation of developmental growth4.38E-03
122GO:0009652: thigmotropism4.38E-03
123GO:0072488: ammonium transmembrane transport4.38E-03
124GO:0015713: phosphoglycerate transport4.38E-03
125GO:0008295: spermidine biosynthetic process4.38E-03
126GO:0080142: regulation of salicylic acid biosynthetic process4.38E-03
127GO:0009269: response to desiccation5.22E-03
128GO:0010225: response to UV-C5.63E-03
129GO:0016094: polyprenol biosynthetic process5.63E-03
130GO:0009697: salicylic acid biosynthetic process5.63E-03
131GO:0034052: positive regulation of plant-type hypersensitive response5.63E-03
132GO:0009164: nucleoside catabolic process5.63E-03
133GO:0080167: response to karrikin6.32E-03
134GO:0009414: response to water deprivation6.73E-03
135GO:0010256: endomembrane system organization6.99E-03
136GO:0033365: protein localization to organelle6.99E-03
137GO:0010337: regulation of salicylic acid metabolic process6.99E-03
138GO:0006596: polyamine biosynthetic process6.99E-03
139GO:0009117: nucleotide metabolic process6.99E-03
140GO:0006574: valine catabolic process6.99E-03
141GO:0002238: response to molecule of fungal origin6.99E-03
142GO:0009759: indole glucosinolate biosynthetic process6.99E-03
143GO:0010942: positive regulation of cell death6.99E-03
144GO:0010310: regulation of hydrogen peroxide metabolic process8.45E-03
145GO:0071470: cellular response to osmotic stress8.45E-03
146GO:0042372: phylloquinone biosynthetic process8.45E-03
147GO:0045926: negative regulation of growth8.45E-03
148GO:0009612: response to mechanical stimulus8.45E-03
149GO:0009942: longitudinal axis specification8.45E-03
150GO:0006486: protein glycosylation9.83E-03
151GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.00E-02
152GO:0043090: amino acid import1.00E-02
153GO:0071446: cellular response to salicylic acid stimulus1.00E-02
154GO:1900056: negative regulation of leaf senescence1.00E-02
155GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c1.00E-02
156GO:1900057: positive regulation of leaf senescence1.00E-02
157GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.00E-02
158GO:0050829: defense response to Gram-negative bacterium1.00E-02
159GO:1902074: response to salt1.00E-02
160GO:0009617: response to bacterium1.05E-02
161GO:0007264: small GTPase mediated signal transduction1.14E-02
162GO:0031540: regulation of anthocyanin biosynthetic process1.17E-02
163GO:0030091: protein repair1.17E-02
164GO:0010928: regulation of auxin mediated signaling pathway1.17E-02
165GO:0009787: regulation of abscisic acid-activated signaling pathway1.17E-02
166GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.17E-02
167GO:0009819: drought recovery1.17E-02
168GO:0043068: positive regulation of programmed cell death1.17E-02
169GO:0010208: pollen wall assembly1.34E-02
170GO:0006997: nucleus organization1.34E-02
171GO:0010204: defense response signaling pathway, resistance gene-independent1.34E-02
172GO:0007338: single fertilization1.53E-02
173GO:0046916: cellular transition metal ion homeostasis1.53E-02
174GO:0019432: triglyceride biosynthetic process1.53E-02
175GO:0009624: response to nematode1.54E-02
176GO:0090332: stomatal closure1.72E-02
177GO:0048268: clathrin coat assembly1.72E-02
178GO:0010380: regulation of chlorophyll biosynthetic process1.72E-02
179GO:0008202: steroid metabolic process1.72E-02
180GO:0009627: systemic acquired resistance1.74E-02
181GO:0006950: response to stress1.83E-02
182GO:0055085: transmembrane transport1.87E-02
183GO:0051555: flavonol biosynthetic process1.92E-02
184GO:0009870: defense response signaling pathway, resistance gene-dependent1.92E-02
185GO:0006032: chitin catabolic process1.92E-02
186GO:0019538: protein metabolic process1.92E-02
187GO:0009723: response to ethylene1.95E-02
188GO:0009684: indoleacetic acid biosynthetic process2.13E-02
189GO:0019684: photosynthesis, light reaction2.13E-02
190GO:0009089: lysine biosynthetic process via diaminopimelate2.13E-02
191GO:0072593: reactive oxygen species metabolic process2.13E-02
192GO:0048229: gametophyte development2.13E-02
193GO:0006499: N-terminal protein myristoylation2.24E-02
194GO:0000266: mitochondrial fission2.34E-02
195GO:0012501: programmed cell death2.34E-02
196GO:0002213: defense response to insect2.34E-02
197GO:0010105: negative regulation of ethylene-activated signaling pathway2.34E-02
198GO:0007568: aging2.35E-02
199GO:0048527: lateral root development2.35E-02
200GO:0010119: regulation of stomatal movement2.35E-02
201GO:0009790: embryo development2.50E-02
202GO:0055046: microgametogenesis2.57E-02
203GO:0006829: zinc II ion transport2.57E-02
204GO:2000028: regulation of photoperiodism, flowering2.57E-02
205GO:0034605: cellular response to heat2.80E-02
206GO:0002237: response to molecule of bacterial origin2.80E-02
207GO:0046688: response to copper ion3.04E-02
208GO:0010167: response to nitrate3.04E-02
209GO:0006887: exocytosis3.07E-02
210GO:0006897: endocytosis3.07E-02
211GO:0000162: tryptophan biosynthetic process3.28E-02
212GO:0009863: salicylic acid mediated signaling pathway3.53E-02
213GO:0006470: protein dephosphorylation3.64E-02
214GO:0006825: copper ion transport3.79E-02
215GO:0006874: cellular calcium ion homeostasis3.79E-02
216GO:0016998: cell wall macromolecule catabolic process4.05E-02
217GO:0006812: cation transport4.17E-02
218GO:0010017: red or far-red light signaling pathway4.32E-02
219GO:0006813: potassium ion transport4.47E-02
220GO:0042127: regulation of cell proliferation4.88E-02
221GO:0009561: megagametogenesis4.88E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
3GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
4GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
5GO:0005212: structural constituent of eye lens0.00E+00
6GO:0003978: UDP-glucose 4-epimerase activity2.16E-05
7GO:0050373: UDP-arabinose 4-epimerase activity2.03E-04
8GO:0016301: kinase activity2.79E-04
9GO:0047631: ADP-ribose diphosphatase activity3.06E-04
10GO:0030552: cAMP binding3.77E-04
11GO:0030553: cGMP binding3.77E-04
12GO:0000210: NAD+ diphosphatase activity4.27E-04
13GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.67E-04
14GO:0004012: phospholipid-translocating ATPase activity5.67E-04
15GO:0005216: ion channel activity5.69E-04
16GO:0032050: clathrin heavy chain binding6.31E-04
17GO:2001227: quercitrin binding6.31E-04
18GO:0019707: protein-cysteine S-acyltransferase activity6.31E-04
19GO:2001147: camalexin binding6.31E-04
20GO:0008792: arginine decarboxylase activity6.31E-04
21GO:0015245: fatty acid transporter activity6.31E-04
22GO:0010285: L,L-diaminopimelate aminotransferase activity6.31E-04
23GO:0015238: drug transmembrane transporter activity6.54E-04
24GO:0043295: glutathione binding7.25E-04
25GO:0005509: calcium ion binding7.88E-04
26GO:0004714: transmembrane receptor protein tyrosine kinase activity9.01E-04
27GO:0005544: calcium-dependent phospholipid binding9.01E-04
28GO:0005249: voltage-gated potassium channel activity1.10E-03
29GO:0030551: cyclic nucleotide binding1.10E-03
30GO:0050291: sphingosine N-acyltransferase activity1.36E-03
31GO:0047364: desulfoglucosinolate sulfotransferase activity1.36E-03
32GO:0015152: glucose-6-phosphate transmembrane transporter activity1.36E-03
33GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.36E-03
34GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.36E-03
35GO:0032934: sterol binding1.36E-03
36GO:0015036: disulfide oxidoreductase activity1.36E-03
37GO:0004385: guanylate kinase activity1.36E-03
38GO:0050736: O-malonyltransferase activity1.36E-03
39GO:0048531: beta-1,3-galactosyltransferase activity1.36E-03
40GO:0019901: protein kinase binding1.45E-03
41GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.76E-03
42GO:0004568: chitinase activity1.81E-03
43GO:0015297: antiporter activity1.84E-03
44GO:0004674: protein serine/threonine kinase activity1.87E-03
45GO:0008559: xenobiotic-transporting ATPase activity2.10E-03
46GO:0071917: triose-phosphate transmembrane transporter activity2.24E-03
47GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity2.24E-03
48GO:0004324: ferredoxin-NADP+ reductase activity2.24E-03
49GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity2.24E-03
50GO:0016531: copper chaperone activity2.24E-03
51GO:0032403: protein complex binding2.24E-03
52GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.74E-03
53GO:0017077: oxidative phosphorylation uncoupler activity3.25E-03
54GO:0017089: glycolipid transporter activity3.25E-03
55GO:0035529: NADH pyrophosphatase activity3.25E-03
56GO:0022890: inorganic cation transmembrane transporter activity3.25E-03
57GO:0001046: core promoter sequence-specific DNA binding4.30E-03
58GO:0003714: transcription corepressor activity4.30E-03
59GO:0015120: phosphoglycerate transmembrane transporter activity4.38E-03
60GO:0004834: tryptophan synthase activity4.38E-03
61GO:0004737: pyruvate decarboxylase activity4.38E-03
62GO:0051861: glycolipid binding4.38E-03
63GO:0009916: alternative oxidase activity4.38E-03
64GO:0004930: G-protein coupled receptor activity4.38E-03
65GO:0033612: receptor serine/threonine kinase binding5.22E-03
66GO:0005471: ATP:ADP antiporter activity5.63E-03
67GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.63E-03
68GO:0002094: polyprenyltransferase activity5.63E-03
69GO:0005496: steroid binding5.63E-03
70GO:0004364: glutathione transferase activity6.37E-03
71GO:0004499: N,N-dimethylaniline monooxygenase activity6.81E-03
72GO:0008519: ammonium transmembrane transporter activity6.99E-03
73GO:0030976: thiamine pyrophosphate binding6.99E-03
74GO:0008113: peptide-methionine (S)-S-oxide reductase activity8.45E-03
75GO:0033743: peptide-methionine (R)-S-oxide reductase activity8.45E-03
76GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides8.45E-03
77GO:0003950: NAD+ ADP-ribosyltransferase activity8.45E-03
78GO:0004144: diacylglycerol O-acyltransferase activity8.45E-03
79GO:0005261: cation channel activity8.45E-03
80GO:0004656: procollagen-proline 4-dioxygenase activity8.45E-03
81GO:0015299: solute:proton antiporter activity9.28E-03
82GO:0043565: sequence-specific DNA binding9.49E-03
83GO:0016831: carboxy-lyase activity1.00E-02
84GO:0005524: ATP binding1.12E-02
85GO:0047893: flavonol 3-O-glucosyltransferase activity1.17E-02
86GO:0004033: aldo-keto reductase (NADP) activity1.17E-02
87GO:0008142: oxysterol binding1.34E-02
88GO:0008483: transaminase activity1.38E-02
89GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.38E-02
90GO:0071949: FAD binding1.53E-02
91GO:0005515: protein binding1.55E-02
92GO:0047617: acyl-CoA hydrolase activity1.72E-02
93GO:0016740: transferase activity1.74E-02
94GO:0008375: acetylglucosaminyltransferase activity1.74E-02
95GO:0004806: triglyceride lipase activity1.83E-02
96GO:0008171: O-methyltransferase activity1.92E-02
97GO:0005545: 1-phosphatidylinositol binding1.92E-02
98GO:0015020: glucuronosyltransferase activity1.92E-02
99GO:0004864: protein phosphatase inhibitor activity1.92E-02
100GO:0016758: transferase activity, transferring hexosyl groups1.99E-02
101GO:0015386: potassium:proton antiporter activity2.13E-02
102GO:0004497: monooxygenase activity2.16E-02
103GO:0005507: copper ion binding2.32E-02
104GO:0005315: inorganic phosphate transmembrane transporter activity2.57E-02
105GO:0005516: calmodulin binding2.58E-02
106GO:0016757: transferase activity, transferring glycosyl groups2.65E-02
107GO:0050661: NADP binding2.94E-02
108GO:0004190: aspartic-type endopeptidase activity3.04E-02
109GO:0004970: ionotropic glutamate receptor activity3.04E-02
110GO:0008146: sulfotransferase activity3.04E-02
111GO:0005217: intracellular ligand-gated ion channel activity3.04E-02
112GO:0031418: L-ascorbic acid binding3.53E-02
113GO:0003954: NADH dehydrogenase activity3.53E-02
114GO:0008194: UDP-glycosyltransferase activity3.54E-02
115GO:0004842: ubiquitin-protein transferase activity3.54E-02
116GO:0043424: protein histidine kinase binding3.79E-02
117GO:0015079: potassium ion transmembrane transporter activity3.79E-02
118GO:0008324: cation transmembrane transporter activity3.79E-02
119GO:0004672: protein kinase activity3.99E-02
120GO:0051287: NAD binding4.02E-02
121GO:0019706: protein-cysteine S-palmitoyltransferase activity4.05E-02
122GO:0035251: UDP-glucosyltransferase activity4.05E-02
123GO:0004707: MAP kinase activity4.05E-02
124GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.14E-02
125GO:0009055: electron carrier activity4.23E-02
126GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.32E-02
127GO:0016298: lipase activity4.62E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0016021: integral component of membrane1.40E-09
3GO:0005886: plasma membrane3.28E-09
4GO:0005794: Golgi apparatus1.93E-04
5GO:0000813: ESCRT I complex3.06E-04
6GO:0000164: protein phosphatase type 1 complex3.06E-04
7GO:0000138: Golgi trans cisterna6.31E-04
8GO:0005901: caveola1.36E-03
9GO:0031304: intrinsic component of mitochondrial inner membrane1.36E-03
10GO:0031314: extrinsic component of mitochondrial inner membrane1.36E-03
11GO:0008287: protein serine/threonine phosphatase complex2.24E-03
12GO:0009530: primary cell wall2.24E-03
13GO:0070062: extracellular exosome3.25E-03
14GO:0005758: mitochondrial intermembrane space4.30E-03
15GO:0070469: respiratory chain4.75E-03
16GO:0016363: nuclear matrix8.45E-03
17GO:0005743: mitochondrial inner membrane1.10E-02
18GO:0005802: trans-Golgi network1.11E-02
19GO:0032580: Golgi cisterna membrane1.30E-02
20GO:0005774: vacuolar membrane1.32E-02
21GO:0005777: peroxisome1.54E-02
22GO:0005789: endoplasmic reticulum membrane1.89E-02
23GO:0030125: clathrin vesicle coat1.92E-02
24GO:0005740: mitochondrial envelope1.92E-02
25GO:0000325: plant-type vacuole2.35E-02
26GO:0005795: Golgi stack3.04E-02
27GO:0005769: early endosome3.28E-02
28GO:0005905: clathrin-coated pit4.05E-02
29GO:0005741: mitochondrial outer membrane4.05E-02
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Gene type



Gene DE type