Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G56550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0055122: response to very low light intensity stimulus0.00E+00
2GO:0003400: regulation of COPII vesicle coating1.97E-05
3GO:0000303: response to superoxide1.97E-05
4GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic1.97E-05
5GO:0008535: respiratory chain complex IV assembly5.10E-05
6GO:0042780: tRNA 3'-end processing9.05E-05
7GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic9.05E-05
8GO:0042256: mature ribosome assembly9.05E-05
9GO:0006809: nitric oxide biosynthetic process1.36E-04
10GO:0034613: cellular protein localization1.86E-04
11GO:0008152: metabolic process3.12E-04
12GO:0009903: chloroplast avoidance movement3.57E-04
13GO:0006396: RNA processing5.98E-04
14GO:0030042: actin filament depolymerization6.90E-04
15GO:0012501: programmed cell death9.12E-04
16GO:0010102: lateral root morphogenesis9.90E-04
17GO:0034605: cellular response to heat1.07E-03
18GO:2000377: regulation of reactive oxygen species metabolic process1.32E-03
19GO:0009306: protein secretion1.78E-03
20GO:0006817: phosphate ion transport1.78E-03
21GO:0010193: response to ozone2.40E-03
22GO:0016032: viral process2.50E-03
23GO:0009408: response to heat2.67E-03
24GO:0009816: defense response to bacterium, incompatible interaction3.19E-03
25GO:0048573: photoperiodism, flowering3.43E-03
26GO:0009873: ethylene-activated signaling pathway3.43E-03
27GO:0006888: ER to Golgi vesicle-mediated transport3.43E-03
28GO:0009867: jasmonic acid mediated signaling pathway4.32E-03
29GO:0042542: response to hydrogen peroxide4.99E-03
30GO:0000209: protein polyubiquitination5.28E-03
31GO:0009644: response to high light intensity5.42E-03
32GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process5.86E-03
33GO:0006457: protein folding6.08E-03
34GO:0006857: oligopeptide transport6.61E-03
35GO:0006979: response to oxidative stress9.58E-03
36GO:0009790: embryo development1.05E-02
37GO:0016036: cellular response to phosphate starvation1.12E-02
38GO:0010150: leaf senescence1.18E-02
39GO:0010228: vegetative to reproductive phase transition of meristem1.22E-02
40GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.28E-02
41GO:0006470: protein dephosphorylation1.30E-02
42GO:0009860: pollen tube growth1.70E-02
43GO:0006970: response to osmotic stress1.70E-02
44GO:0009723: response to ethylene1.78E-02
45GO:0044550: secondary metabolite biosynthetic process1.99E-02
46GO:0016042: lipid catabolic process2.42E-02
47GO:0006629: lipid metabolic process2.47E-02
48GO:0009738: abscisic acid-activated signaling pathway3.64E-02
49GO:0055085: transmembrane transport4.41E-02
RankGO TermAdjusted P value
1GO:0005090: Sar guanyl-nucleotide exchange factor activity1.97E-05
2GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters5.10E-05
3GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity5.10E-05
4GO:0042781: 3'-tRNA processing endoribonuclease activity9.05E-05
5GO:0046527: glucosyltransferase activity1.86E-04
6GO:0051020: GTPase binding3.57E-04
7GO:0003950: NAD+ ADP-ribosyltransferase activity3.57E-04
8GO:0004525: ribonuclease III activity4.84E-04
9GO:0080043: quercetin 3-O-glucosyltransferase activity5.32E-04
10GO:0080044: quercetin 7-O-glucosyltransferase activity5.32E-04
11GO:0015198: oligopeptide transporter activity9.12E-04
12GO:0008194: UDP-glycosyltransferase activity1.09E-03
13GO:0016597: amino acid binding2.95E-03
14GO:0004721: phosphoprotein phosphatase activity3.43E-03
15GO:0004004: ATP-dependent RNA helicase activity3.43E-03
16GO:0004806: triglyceride lipase activity3.43E-03
17GO:0005096: GTPase activator activity3.80E-03
18GO:0004222: metalloendopeptidase activity3.93E-03
19GO:0022857: transmembrane transporter activity7.72E-03
20GO:0003779: actin binding7.89E-03
21GO:0004386: helicase activity8.56E-03
22GO:0061630: ubiquitin protein ligase activity1.94E-02
23GO:0016787: hydrolase activity2.05E-02
24GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.25E-02
25GO:0004722: protein serine/threonine phosphatase activity2.28E-02
26GO:0000166: nucleotide binding3.72E-02
27GO:0003676: nucleic acid binding3.93E-02
28GO:0019825: oxygen binding4.79E-02
RankGO TermAdjusted P value
1GO:0016363: nuclear matrix3.57E-04
2GO:0030176: integral component of endoplasmic reticulum membrane1.15E-03
3GO:0015629: actin cytoskeleton1.68E-03
4GO:0043231: intracellular membrane-bounded organelle2.94E-03
5GO:0005788: endoplasmic reticulum lumen3.19E-03
6GO:0009543: chloroplast thylakoid lumen9.42E-03
7GO:0005737: cytoplasm1.21E-02
8GO:0005743: mitochondrial inner membrane2.35E-02
9GO:0005777: peroxisome4.11E-02
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Gene type



Gene DE type