co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G55360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000372: Group I intron splicing	0.00E+00
2	GO:0043972: histone H3-K23 acetylation	0.00E+00
3	GO:0044154: histone H3-K14 acetylation	0.00E+00
4	GO:1901698: response to nitrogen compound	0.00E+00
5	GO:0046460: neutral lipid biosynthetic process	0.00E+00
6	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
7	GO:0048657: anther wall tapetum cell differentiation	2.04E-04
8	GO:0042547: cell wall modification involved in multidimensional cell growth	2.04E-04
9	GO:0006436: tryptophanyl-tRNA aminoacylation	2.04E-04
10	GO:0000066: mitochondrial ornithine transport	2.04E-04
11	GO:0051171: regulation of nitrogen compound metabolic process	2.04E-04
12	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	2.04E-04
13	GO:0043971: histone H3-K18 acetylation	2.04E-04
14	GO:0000373: Group II intron splicing	2.57E-04
15	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	4.57E-04
16	GO:0010275: NAD(P)H dehydrogenase complex assembly	4.57E-04
17	GO:0006435: threonyl-tRNA aminoacylation	4.57E-04
18	GO:0080005: photosystem stoichiometry adjustment	4.57E-04
19	GO:0006508: proteolysis	6.03E-04
20	GO:0001578: microtubule bundle formation	7.44E-04
21	GO:0045493: xylan catabolic process	7.44E-04
22	GO:0006013: mannose metabolic process	7.44E-04
23	GO:0071705: nitrogen compound transport	7.44E-04
24	GO:0009800: cinnamic acid biosynthetic process	1.06E-03
25	GO:0010306: rhamnogalacturonan II biosynthetic process	1.06E-03
26	GO:0010255: glucose mediated signaling pathway	1.06E-03
27	GO:0051322: anaphase	1.41E-03
28	GO:0071249: cellular response to nitrate	1.41E-03
29	GO:0006552: leucine catabolic process	1.41E-03
30	GO:0007020: microtubule nucleation	1.41E-03
31	GO:0015846: polyamine transport	1.41E-03
32	GO:0048868: pollen tube development	1.63E-03
33	GO:0031365: N-terminal protein amino acid modification	1.80E-03
34	GO:0006465: signal peptide processing	1.80E-03
35	GO:0046785: microtubule polymerization	1.80E-03
36	GO:0006559: L-phenylalanine catabolic process	2.21E-03
37	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.66E-03
38	GO:0034389: lipid particle organization	2.66E-03
39	GO:0022904: respiratory electron transport chain	3.13E-03
40	GO:0009610: response to symbiotic fungus	3.13E-03
41	GO:0048528: post-embryonic root development	3.13E-03
42	GO:0019745: pentacyclic triterpenoid biosynthetic process	3.13E-03
43	GO:0009704: de-etiolation	3.63E-03
44	GO:0007155: cell adhesion	3.63E-03
45	GO:0048564: photosystem I assembly	3.63E-03
46	GO:0006353: DNA-templated transcription, termination	3.63E-03
47	GO:0007389: pattern specification process	4.15E-03
48	GO:0044030: regulation of DNA methylation	4.15E-03
49	GO:0009932: cell tip growth	4.15E-03
50	GO:0006002: fructose 6-phosphate metabolic process	4.15E-03
51	GO:0022900: electron transport chain	4.15E-03
52	GO:0009827: plant-type cell wall modification	4.15E-03
53	GO:0019432: triglyceride biosynthetic process	4.70E-03
54	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.70E-03
55	GO:0010380: regulation of chlorophyll biosynthetic process	5.27E-03
56	GO:0006535: cysteine biosynthetic process from serine	5.86E-03
57	GO:0009750: response to fructose	6.48E-03
58	GO:0015706: nitrate transport	7.12E-03
59	GO:0009767: photosynthetic electron transport chain	7.78E-03
60	GO:0080167: response to karrikin	8.35E-03
61	GO:0010207: photosystem II assembly	8.47E-03
62	GO:0006417: regulation of translation	9.16E-03
63	GO:0010053: root epidermal cell differentiation	9.17E-03
64	GO:0080188: RNA-directed DNA methylation	9.17E-03
65	GO:0010167: response to nitrate	9.17E-03
66	GO:0006071: glycerol metabolic process	9.90E-03
67	GO:0006289: nucleotide-excision repair	1.06E-02
68	GO:0019344: cysteine biosynthetic process	1.06E-02
69	GO:0010187: negative regulation of seed germination	1.06E-02
70	GO:0009740: gibberellic acid mediated signaling pathway	1.11E-02
71	GO:0010073: meristem maintenance	1.14E-02
72	GO:0006825: copper ion transport	1.14E-02
73	GO:0006418: tRNA aminoacylation for protein translation	1.14E-02
74	GO:0043622: cortical microtubule organization	1.14E-02
75	GO:0015992: proton transport	1.22E-02
76	GO:0048511: rhythmic process	1.22E-02
77	GO:0080092: regulation of pollen tube growth	1.30E-02
78	GO:0035428: hexose transmembrane transport	1.30E-02
79	GO:0009814: defense response, incompatible interaction	1.30E-02
80	GO:0016226: iron-sulfur cluster assembly	1.30E-02
81	GO:0010584: pollen exine formation	1.47E-02
82	GO:0042744: hydrogen peroxide catabolic process	1.69E-02
83	GO:0046323: glucose import	1.73E-02
84	GO:0010268: brassinosteroid homeostasis	1.73E-02
85	GO:0045489: pectin biosynthetic process	1.73E-02
86	GO:0009646: response to absence of light	1.82E-02
87	GO:0006633: fatty acid biosynthetic process	1.86E-02
88	GO:0009749: response to glucose	1.92E-02
89	GO:0016132: brassinosteroid biosynthetic process	2.01E-02
90	GO:0009451: RNA modification	2.09E-02
91	GO:0007264: small GTPase mediated signal transduction	2.11E-02
92	GO:0010583: response to cyclopentenone	2.11E-02
93	GO:0071281: cellular response to iron ion	2.21E-02
94	GO:0009739: response to gibberellin	2.29E-02
95	GO:0016125: sterol metabolic process	2.30E-02
96	GO:0010252: auxin homeostasis	2.30E-02
97	GO:0010468: regulation of gene expression	2.44E-02
98	GO:0000910: cytokinesis	2.51E-02
99	GO:0016126: sterol biosynthetic process	2.61E-02
100	GO:0009911: positive regulation of flower development	2.61E-02
101	GO:0009416: response to light stimulus	2.82E-02
102	GO:0010411: xyloglucan metabolic process	2.94E-02
103	GO:0048481: plant ovule development	3.16E-02
104	GO:0030244: cellulose biosynthetic process	3.16E-02
105	GO:0009834: plant-type secondary cell wall biogenesis	3.38E-02
106	GO:0006811: ion transport	3.38E-02
107	GO:0009860: pollen tube growth	3.41E-02
108	GO:0007568: aging	3.50E-02
109	GO:0009910: negative regulation of flower development	3.50E-02
110	GO:0009853: photorespiration	3.74E-02
111	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.05E-02
112	GO:0006839: mitochondrial transport	4.10E-02
113	GO:0046777: protein autophosphorylation	4.19E-02
114	GO:0009926: auxin polar transport	4.47E-02
115	GO:0009744: response to sucrose	4.47E-02
116	GO:0008283: cell proliferation	4.47E-02

Rank	GO Term	Adjusted P value
1	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
2	GO:0048039: ubiquinone binding	0.00E+00
3	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
4	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
5	GO:0102245: lupan-3beta,20-diol synthase activity	0.00E+00
6	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
7	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
8	GO:0019808: polyamine binding	0.00E+00
9	GO:0004830: tryptophan-tRNA ligase activity	2.04E-04
10	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	2.04E-04
11	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	2.04E-04
12	GO:0005290: L-histidine transmembrane transporter activity	2.04E-04
13	GO:0004008: copper-exporting ATPase activity	2.04E-04
14	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	2.04E-04
15	GO:0050017: L-3-cyanoalanine synthase activity	4.57E-04
16	GO:0005094: Rho GDP-dissociation inhibitor activity	4.57E-04
17	GO:0004047: aminomethyltransferase activity	4.57E-04
18	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	4.57E-04
19	GO:0000064: L-ornithine transmembrane transporter activity	4.57E-04
20	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	4.57E-04
21	GO:0004829: threonine-tRNA ligase activity	4.57E-04
22	GO:0046872: metal ion binding	5.16E-04
23	GO:0016805: dipeptidase activity	7.44E-04
24	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	7.44E-04
25	GO:0042300: beta-amyrin synthase activity	7.44E-04
26	GO:0045548: phenylalanine ammonia-lyase activity	7.44E-04
27	GO:0032549: ribonucleoside binding	7.44E-04
28	GO:0004176: ATP-dependent peptidase activity	1.01E-03
29	GO:0015189: L-lysine transmembrane transporter activity	1.06E-03
30	GO:0000254: C-4 methylsterol oxidase activity	1.06E-03
31	GO:0015181: arginine transmembrane transporter activity	1.06E-03
32	GO:0042299: lupeol synthase activity	1.06E-03
33	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.06E-03
34	GO:0046556: alpha-L-arabinofuranosidase activity	1.41E-03
35	GO:0010385: double-stranded methylated DNA binding	1.41E-03
36	GO:0070628: proteasome binding	1.41E-03
37	GO:0009044: xylan 1,4-beta-xylosidase activity	1.41E-03
38	GO:0005471: ATP:ADP antiporter activity	1.80E-03
39	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.80E-03
40	GO:0031593: polyubiquitin binding	2.21E-03
41	GO:0008237: metallopeptidase activity	2.58E-03
42	GO:0004144: diacylglycerol O-acyltransferase activity	2.66E-03
43	GO:0004559: alpha-mannosidase activity	2.66E-03
44	GO:0004124: cysteine synthase activity	2.66E-03
45	GO:0008235: metalloexopeptidase activity	3.13E-03
46	GO:0004427: inorganic diphosphatase activity	3.13E-03
47	GO:0003872: 6-phosphofructokinase activity	3.13E-03
48	GO:0019899: enzyme binding	3.13E-03
49	GO:0004222: metalloendopeptidase activity	4.15E-03
50	GO:0005375: copper ion transmembrane transporter activity	4.15E-03
51	GO:0009672: auxin:proton symporter activity	5.27E-03
52	GO:0015020: glucuronosyltransferase activity	5.86E-03
53	GO:0008327: methyl-CpG binding	6.48E-03
54	GO:0001054: RNA polymerase I activity	6.48E-03
55	GO:0004177: aminopeptidase activity	6.48E-03
56	GO:0005089: Rho guanyl-nucleotide exchange factor activity	6.48E-03
57	GO:0051537: 2 iron, 2 sulfur cluster binding	6.63E-03
58	GO:0010329: auxin efflux transmembrane transporter activity	7.78E-03
59	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.78E-03
60	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	9.90E-03
61	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	9.90E-03
62	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	9.90E-03
63	GO:0043130: ubiquitin binding	1.06E-02
64	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.08E-02
65	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.08E-02
66	GO:0030570: pectate lyase activity	1.38E-02
67	GO:0004812: aminoacyl-tRNA ligase activity	1.55E-02
68	GO:0004402: histone acetyltransferase activity	1.64E-02
69	GO:0008536: Ran GTPase binding	1.73E-02
70	GO:0001085: RNA polymerase II transcription factor binding	1.73E-02
71	GO:0010181: FMN binding	1.82E-02
72	GO:0005355: glucose transmembrane transporter activity	1.82E-02
73	GO:0019901: protein kinase binding	1.92E-02
74	GO:0004518: nuclease activity	2.11E-02
75	GO:0008017: microtubule binding	2.14E-02
76	GO:0008194: UDP-glycosyltransferase activity	2.29E-02
77	GO:0003684: damaged DNA binding	2.30E-02
78	GO:0016413: O-acetyltransferase activity	2.51E-02
79	GO:0004806: triglyceride lipase activity	2.94E-02
80	GO:0004721: phosphoprotein phosphatase activity	2.94E-02
81	GO:0046982: protein heterodimerization activity	3.11E-02
82	GO:0004601: peroxidase activity	3.17E-02
83	GO:0005096: GTPase activator activity	3.27E-02
84	GO:0003682: chromatin binding	3.35E-02
85	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.38E-02
86	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.50E-02
87	GO:0003993: acid phosphatase activity	3.86E-02
88	GO:0030246: carbohydrate binding	4.07E-02
89	GO:0042393: histone binding	4.10E-02
90	GO:0051539: 4 iron, 4 sulfur cluster binding	4.10E-02
91	GO:0004185: serine-type carboxypeptidase activity	4.47E-02
92	GO:0043621: protein self-association	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0042597: periplasmic space	0.00E+00
3	GO:0009507: chloroplast	7.86E-06
4	GO:0010370: perinucleolar chromocenter	2.04E-04
5	GO:0072686: mitotic spindle	1.80E-03
6	GO:0005945: 6-phosphofructokinase complex	1.80E-03
7	GO:0010005: cortical microtubule, transverse to long axis	2.66E-03
8	GO:0009505: plant-type cell wall	2.67E-03
9	GO:0030529: intracellular ribonucleoprotein complex	2.89E-03
10	GO:0031305: integral component of mitochondrial inner membrane	3.63E-03
11	GO:0005811: lipid particle	4.15E-03
12	GO:0009570: chloroplast stroma	4.25E-03
13	GO:0005720: nuclear heterochromatin	4.70E-03
14	GO:0005736: DNA-directed RNA polymerase I complex	4.70E-03
15	GO:0005819: spindle	5.20E-03
16	GO:0055028: cortical microtubule	5.86E-03
17	GO:0005740: mitochondrial envelope	5.86E-03
18	GO:0016324: apical plasma membrane	5.86E-03
19	GO:0009574: preprophase band	7.78E-03
20	GO:0005938: cell cortex	7.78E-03
21	GO:0016602: CCAAT-binding factor complex	7.78E-03
22	GO:0045271: respiratory chain complex I	1.14E-02
23	GO:0009532: plastid stroma	1.22E-02
24	GO:0031225: anchored component of membrane	1.42E-02
25	GO:0009535: chloroplast thylakoid membrane	2.45E-02
26	GO:0005667: transcription factor complex	2.83E-02
27	GO:0009707: chloroplast outer membrane	3.16E-02
28	GO:0005874: microtubule	3.79E-02
29	GO:0031969: chloroplast membrane	3.92E-02
30	GO:0005856: cytoskeleton	4.86E-02