GO Enrichment Analysis of Co-expressed Genes with
AT1G55260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 3 | GO:0015979: photosynthesis | 3.34E-17 |
| 4 | GO:0010196: nonphotochemical quenching | 1.92E-08 |
| 5 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 6.26E-08 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 1.03E-07 |
| 7 | GO:0006000: fructose metabolic process | 2.43E-07 |
| 8 | GO:0090391: granum assembly | 2.43E-07 |
| 9 | GO:0006094: gluconeogenesis | 2.65E-07 |
| 10 | GO:0006633: fatty acid biosynthetic process | 4.65E-06 |
| 11 | GO:0010027: thylakoid membrane organization | 6.06E-06 |
| 12 | GO:0006002: fructose 6-phosphate metabolic process | 1.10E-05 |
| 13 | GO:0010206: photosystem II repair | 1.39E-05 |
| 14 | GO:0010205: photoinhibition | 1.72E-05 |
| 15 | GO:0009773: photosynthetic electron transport in photosystem I | 2.52E-05 |
| 16 | GO:0005986: sucrose biosynthetic process | 3.49E-05 |
| 17 | GO:0019253: reductive pentose-phosphate cycle | 4.04E-05 |
| 18 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.28E-05 |
| 19 | GO:0006518: peptide metabolic process | 1.32E-04 |
| 20 | GO:0006081: cellular aldehyde metabolic process | 1.32E-04 |
| 21 | GO:0055114: oxidation-reduction process | 2.11E-04 |
| 22 | GO:0009658: chloroplast organization | 2.48E-04 |
| 23 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.55E-04 |
| 24 | GO:0045727: positive regulation of translation | 2.67E-04 |
| 25 | GO:2000122: negative regulation of stomatal complex development | 2.67E-04 |
| 26 | GO:0010037: response to carbon dioxide | 2.67E-04 |
| 27 | GO:0015976: carbon utilization | 2.67E-04 |
| 28 | GO:0016311: dephosphorylation | 3.00E-04 |
| 29 | GO:0010189: vitamin E biosynthetic process | 5.02E-04 |
| 30 | GO:0009409: response to cold | 6.71E-04 |
| 31 | GO:0030091: protein repair | 6.76E-04 |
| 32 | GO:0032544: plastid translation | 7.68E-04 |
| 33 | GO:0006096: glycolytic process | 8.01E-04 |
| 34 | GO:0009245: lipid A biosynthetic process | 8.63E-04 |
| 35 | GO:0072593: reactive oxygen species metabolic process | 1.16E-03 |
| 36 | GO:0000272: polysaccharide catabolic process | 1.16E-03 |
| 37 | GO:0009750: response to fructose | 1.16E-03 |
| 38 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.16E-03 |
| 39 | GO:0005983: starch catabolic process | 1.27E-03 |
| 40 | GO:0006006: glucose metabolic process | 1.38E-03 |
| 41 | GO:0018107: peptidyl-threonine phosphorylation | 1.38E-03 |
| 42 | GO:0009725: response to hormone | 1.38E-03 |
| 43 | GO:0010143: cutin biosynthetic process | 1.50E-03 |
| 44 | GO:0009266: response to temperature stimulus | 1.50E-03 |
| 45 | GO:0005985: sucrose metabolic process | 1.61E-03 |
| 46 | GO:0010025: wax biosynthetic process | 1.73E-03 |
| 47 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.98E-03 |
| 48 | GO:0061077: chaperone-mediated protein folding | 2.11E-03 |
| 49 | GO:0070417: cellular response to cold | 2.66E-03 |
| 50 | GO:0042335: cuticle development | 2.80E-03 |
| 51 | GO:0042631: cellular response to water deprivation | 2.80E-03 |
| 52 | GO:0080167: response to karrikin | 3.04E-03 |
| 53 | GO:0055072: iron ion homeostasis | 3.24E-03 |
| 54 | GO:0006810: transport | 4.32E-03 |
| 55 | GO:0016042: lipid catabolic process | 4.35E-03 |
| 56 | GO:0009627: systemic acquired resistance | 4.70E-03 |
| 57 | GO:0009817: defense response to fungus, incompatible interaction | 5.23E-03 |
| 58 | GO:0018298: protein-chromophore linkage | 5.23E-03 |
| 59 | GO:0010311: lateral root formation | 5.41E-03 |
| 60 | GO:0010218: response to far red light | 5.60E-03 |
| 61 | GO:0009631: cold acclimation | 5.78E-03 |
| 62 | GO:0010119: regulation of stomatal movement | 5.78E-03 |
| 63 | GO:0009637: response to blue light | 6.16E-03 |
| 64 | GO:0006631: fatty acid metabolic process | 6.94E-03 |
| 65 | GO:0009735: response to cytokinin | 7.23E-03 |
| 66 | GO:0010114: response to red light | 7.34E-03 |
| 67 | GO:0009744: response to sucrose | 7.34E-03 |
| 68 | GO:0006364: rRNA processing | 9.03E-03 |
| 69 | GO:0045893: positive regulation of transcription, DNA-templated | 9.08E-03 |
| 70 | GO:0018105: peptidyl-serine phosphorylation | 1.18E-02 |
| 71 | GO:0042742: defense response to bacterium | 1.61E-02 |
| 72 | GO:0006979: response to oxidative stress | 1.62E-02 |
| 73 | GO:0007623: circadian rhythm | 1.70E-02 |
| 74 | GO:0010150: leaf senescence | 1.70E-02 |
| 75 | GO:0010468: regulation of gene expression | 1.93E-02 |
| 76 | GO:0009723: response to ethylene | 2.58E-02 |
| 77 | GO:0045454: cell redox homeostasis | 3.08E-02 |
| 78 | GO:0006869: lipid transport | 3.29E-02 |
| 79 | GO:0006629: lipid metabolic process | 3.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 3 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 4 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 6.26E-08 |
| 5 | GO:0045485: omega-6 fatty acid desaturase activity | 3.00E-05 |
| 6 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 3.00E-05 |
| 7 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 7.58E-05 |
| 8 | GO:0016630: protochlorophyllide reductase activity | 7.58E-05 |
| 9 | GO:0042389: omega-3 fatty acid desaturase activity | 7.58E-05 |
| 10 | GO:0010297: heteropolysaccharide binding | 7.58E-05 |
| 11 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 1.32E-04 |
| 12 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.32E-04 |
| 13 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.97E-04 |
| 14 | GO:0016851: magnesium chelatase activity | 1.97E-04 |
| 15 | GO:0016788: hydrolase activity, acting on ester bonds | 2.54E-04 |
| 16 | GO:0016168: chlorophyll binding | 2.55E-04 |
| 17 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 4.20E-04 |
| 18 | GO:0031177: phosphopantetheine binding | 4.20E-04 |
| 19 | GO:0004332: fructose-bisphosphate aldolase activity | 4.20E-04 |
| 20 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 5.02E-04 |
| 21 | GO:0102391: decanoate--CoA ligase activity | 5.02E-04 |
| 22 | GO:0000035: acyl binding | 5.02E-04 |
| 23 | GO:0004467: long-chain fatty acid-CoA ligase activity | 5.88E-04 |
| 24 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 6.76E-04 |
| 25 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 7.68E-04 |
| 26 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 9.61E-04 |
| 27 | GO:0044183: protein binding involved in protein folding | 1.16E-03 |
| 28 | GO:0004089: carbonate dehydratase activity | 1.38E-03 |
| 29 | GO:0031072: heat shock protein binding | 1.38E-03 |
| 30 | GO:0031409: pigment binding | 1.73E-03 |
| 31 | GO:0022891: substrate-specific transmembrane transporter activity | 2.38E-03 |
| 32 | GO:0003756: protein disulfide isomerase activity | 2.52E-03 |
| 33 | GO:0050662: coenzyme binding | 3.09E-03 |
| 34 | GO:0004872: receptor activity | 3.24E-03 |
| 35 | GO:0052689: carboxylic ester hydrolase activity | 3.36E-03 |
| 36 | GO:0048038: quinone binding | 3.40E-03 |
| 37 | GO:0016491: oxidoreductase activity | 3.76E-03 |
| 38 | GO:0046872: metal ion binding | 3.79E-03 |
| 39 | GO:0004222: metalloendopeptidase activity | 5.60E-03 |
| 40 | GO:0030145: manganese ion binding | 5.78E-03 |
| 41 | GO:0003993: acid phosphatase activity | 6.35E-03 |
| 42 | GO:0050661: NADP binding | 6.74E-03 |
| 43 | GO:0051537: 2 iron, 2 sulfur cluster binding | 7.75E-03 |
| 44 | GO:0051287: NAD binding | 8.38E-03 |
| 45 | GO:0051082: unfolded protein binding | 1.16E-02 |
| 46 | GO:0019843: rRNA binding | 1.36E-02 |
| 47 | GO:0008289: lipid binding | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 7.96E-23 |
| 3 | GO:0009534: chloroplast thylakoid | 5.37E-22 |
| 4 | GO:0009507: chloroplast | 1.07E-17 |
| 5 | GO:0009941: chloroplast envelope | 6.50E-17 |
| 6 | GO:0009579: thylakoid | 7.74E-10 |
| 7 | GO:0009523: photosystem II | 2.81E-06 |
| 8 | GO:0010319: stromule | 4.96E-06 |
| 9 | GO:0009570: chloroplast stroma | 8.54E-06 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.39E-05 |
| 11 | GO:0009706: chloroplast inner membrane | 6.05E-05 |
| 12 | GO:0016020: membrane | 7.28E-05 |
| 13 | GO:0031357: integral component of chloroplast inner membrane | 7.58E-05 |
| 14 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 7.58E-05 |
| 15 | GO:0010287: plastoglobule | 7.83E-05 |
| 16 | GO:0010007: magnesium chelatase complex | 1.32E-04 |
| 17 | GO:0009517: PSII associated light-harvesting complex II | 2.67E-04 |
| 18 | GO:0031969: chloroplast membrane | 3.29E-04 |
| 19 | GO:0031977: thylakoid lumen | 4.74E-04 |
| 20 | GO:0009533: chloroplast stromal thylakoid | 5.88E-04 |
| 21 | GO:0048046: apoplast | 6.19E-04 |
| 22 | GO:0009538: photosystem I reaction center | 6.76E-04 |
| 23 | GO:0016021: integral component of membrane | 1.05E-03 |
| 24 | GO:0009543: chloroplast thylakoid lumen | 1.18E-03 |
| 25 | GO:0030095: chloroplast photosystem II | 1.50E-03 |
| 26 | GO:0030076: light-harvesting complex | 1.61E-03 |
| 27 | GO:0009522: photosystem I | 3.09E-03 |
| 28 | GO:0009707: chloroplast outer membrane | 5.23E-03 |
| 29 | GO:0005783: endoplasmic reticulum | 3.10E-02 |