Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G55130

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901333: positive regulation of lateral root development0.00E+00
2GO:0010376: stomatal complex formation4.26E-06
3GO:0090610: bundle sheath cell fate specification4.26E-06
4GO:0050891: multicellular organismal water homeostasis4.26E-06
5GO:0009629: response to gravity1.18E-05
6GO:1900871: chloroplast mRNA modification1.18E-05
7GO:0010424: DNA methylation on cytosine within a CG sequence1.18E-05
8GO:0061087: positive regulation of histone H3-K27 methylation1.18E-05
9GO:0010069: zygote asymmetric cytokinesis in embryo sac1.18E-05
10GO:0010235: guard mother cell cytokinesis1.18E-05
11GO:1902806: regulation of cell cycle G1/S phase transition2.19E-05
12GO:0090436: leaf pavement cell development2.19E-05
13GO:0010321: regulation of vegetative phase change3.41E-05
14GO:1901002: positive regulation of response to salt stress4.83E-05
15GO:0051322: anaphase4.83E-05
16GO:1902584: positive regulation of response to water deprivation4.83E-05
17GO:0009554: megasporogenesis9.94E-05
18GO:2000037: regulation of stomatal complex patterning9.94E-05
19GO:0010444: guard mother cell differentiation1.19E-04
20GO:0048528: post-embryonic root development1.19E-04
21GO:0032875: regulation of DNA endoreduplication1.39E-04
22GO:0010052: guard cell differentiation1.60E-04
23GO:0010233: phloem transport1.60E-04
24GO:0006349: regulation of gene expression by genetic imprinting2.05E-04
25GO:0010216: maintenance of DNA methylation2.53E-04
26GO:0010229: inflorescence development3.02E-04
27GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.16E-04
28GO:0051321: meiotic cell cycle4.63E-04
29GO:0009294: DNA mediated transformation5.20E-04
30GO:0080022: primary root development6.08E-04
31GO:0010051: xylem and phloem pattern formation6.08E-04
32GO:0000226: microtubule cytoskeleton organization6.08E-04
33GO:0009734: auxin-activated signaling pathway6.23E-04
34GO:0010305: leaf vascular tissue pattern formation6.38E-04
35GO:0009908: flower development7.06E-04
36GO:0032502: developmental process7.62E-04
37GO:0000910: cytokinesis8.92E-04
38GO:0009911: positive regulation of flower development9.24E-04
39GO:0009910: negative regulation of flower development1.20E-03
40GO:0000724: double-strand break repair via homologous recombination1.24E-03
41GO:0008283: cell proliferation1.51E-03
42GO:0009926: auxin polar transport1.51E-03
43GO:0010224: response to UV-B1.88E-03
44GO:0016569: covalent chromatin modification2.23E-03
45GO:0009553: embryo sac development2.28E-03
46GO:0009742: brassinosteroid mediated signaling pathway2.41E-03
47GO:0010228: vegetative to reproductive phase transition of meristem3.46E-03
48GO:0009658: chloroplast organization4.52E-03
49GO:0016567: protein ubiquitination4.52E-03
50GO:0048366: leaf development5.05E-03
51GO:0006357: regulation of transcription from RNA polymerase II promoter8.33E-03
52GO:0009416: response to light stimulus1.02E-02
53GO:0006468: protein phosphorylation1.15E-02
54GO:0006511: ubiquitin-dependent protein catabolic process1.27E-02
55GO:0030154: cell differentiation1.79E-02
56GO:0009733: response to auxin1.83E-02
57GO:0006351: transcription, DNA-templated2.02E-02
58GO:0009737: response to abscisic acid2.89E-02
59GO:0006355: regulation of transcription, DNA-templated3.39E-02
RankGO TermAdjusted P value
1GO:0003886: DNA (cytosine-5-)-methyltransferase activity9.94E-05
2GO:0031625: ubiquitin protein ligase binding1.96E-03
3GO:0005515: protein binding2.87E-03
4GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.20E-03
5GO:0008017: microtubule binding3.46E-03
6GO:0008168: methyltransferase activity4.40E-03
7GO:0003682: chromatin binding4.69E-03
8GO:0003677: DNA binding5.28E-03
9GO:0061630: ubiquitin protein ligase activity5.42E-03
10GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting5.93E-03
11GO:0004871: signal transducer activity6.12E-03
12GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding6.38E-03
13GO:0004674: protein serine/threonine kinase activity7.31E-03
14GO:0043565: sequence-specific DNA binding7.59E-03
15GO:0016740: transferase activity1.18E-02
16GO:0044212: transcription regulatory region DNA binding1.69E-02
17GO:0003700: transcription factor activity, sequence-specific DNA binding1.96E-02
18GO:0004842: ubiquitin-protein transferase activity2.12E-02
19GO:0004672: protein kinase activity2.22E-02
20GO:0005524: ATP binding3.34E-02
21GO:0016757: transferase activity, transferring glycosyl groups4.04E-02
RankGO TermAdjusted P value
1GO:0072686: mitotic spindle6.40E-05
2GO:0000922: spindle pole1.83E-04
3GO:0055028: cortical microtubule2.29E-04
4GO:0009574: preprophase band3.02E-04
5GO:0005875: microtubule associated complex3.81E-04
6GO:0005819: spindle1.35E-03
7GO:0009524: phragmoplast2.80E-03
8GO:0005874: microtubule5.11E-03
9GO:0031969: chloroplast membrane5.24E-03
10GO:0009536: plastid1.95E-02
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Gene type



Gene DE type