co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G54460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006569: tryptophan catabolic process	4.26E-06
2	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.41E-05
3	GO:0006542: glutamine biosynthetic process	4.83E-05
4	GO:0009943: adaxial/abaxial axis specification	4.83E-05
5	GO:0006090: pyruvate metabolic process	6.40E-05
6	GO:0010358: leaf shaping	8.11E-05
7	GO:0009554: megasporogenesis	9.94E-05
8	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.19E-04
9	GO:0010120: camalexin biosynthetic process	1.60E-04
10	GO:0010449: root meristem growth	2.05E-04
11	GO:0048229: gametophyte development	2.53E-04
12	GO:0009684: indoleacetic acid biosynthetic process	2.53E-04
13	GO:0009682: induced systemic resistance	2.53E-04
14	GO:0052544: defense response by callose deposition in cell wall	2.53E-04
15	GO:0006108: malate metabolic process	3.02E-04
16	GO:0010075: regulation of meristem growth	3.02E-04
17	GO:0010073: meristem maintenance	4.35E-04
18	GO:0009625: response to insect	5.20E-04
19	GO:0010305: leaf vascular tissue pattern formation	6.38E-04
20	GO:0009556: microsporogenesis	6.99E-04
21	GO:0002229: defense response to oomycetes	7.30E-04
22	GO:0019761: glucosinolate biosynthetic process	7.62E-04
23	GO:0042128: nitrate assimilation	9.92E-04
24	GO:0016049: cell growth	1.06E-03
25	GO:0008283: cell proliferation	1.51E-03
26	GO:0009553: embryo sac development	2.28E-03
27	GO:0010150: leaf senescence	3.36E-03
28	GO:0009617: response to bacterium	3.79E-03
29	GO:0006629: lipid metabolic process	6.85E-03
30	GO:0048364: root development	7.06E-03
31	GO:0009734: auxin-activated signaling pathway	8.70E-03
32	GO:0055114: oxidation-reduction process	9.36E-03
33	GO:0051301: cell division	1.09E-02
34	GO:0009414: response to water deprivation	1.66E-02
35	GO:0042742: defense response to bacterium	1.69E-02
36	GO:0006979: response to oxidative stress	1.70E-02
37	GO:0046686: response to cadmium ion	2.31E-02
38	GO:0009793: embryo development ending in seed dormancy	3.07E-02

Rank	GO Term	Adjusted P value
1	GO:0030145: manganese ion binding	2.67E-05
2	GO:0004470: malic enzyme activity	4.83E-05
3	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	4.83E-05
4	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	4.83E-05
5	GO:0004356: glutamate-ammonia ligase activity	6.40E-05
6	GO:0045735: nutrient reservoir activity	6.92E-05
7	GO:0004602: glutathione peroxidase activity	9.94E-05
8	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.19E-04
9	GO:0050897: cobalt ion binding	1.20E-03
10	GO:0051287: NAD binding	1.71E-03
11	GO:0004601: peroxidase activity	4.52E-03
12	GO:0042803: protein homodimerization activity	6.12E-03
13	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	6.25E-03
14	GO:0005507: copper ion binding	1.31E-02
15	GO:0019825: oxygen binding	1.31E-02
16	GO:0005506: iron ion binding	1.67E-02
17	GO:0003824: catalytic activity	1.80E-02
18	GO:0020037: heme binding	2.33E-02

Rank	GO Term	Adjusted P value
1	GO:0005750: mitochondrial respiratory chain complex III	3.28E-04
2	GO:0005769: early endosome	3.81E-04
3	GO:0009705: plant-type vacuole membrane	3.36E-03
4	GO:0048046: apoplast	5.40E-03
5	GO:0022626: cytosolic ribosome	9.92E-03
6	GO:0005777: peroxisome	1.13E-02
7	GO:0005802: trans-Golgi network	1.43E-02
8	GO:0005774: vacuolar membrane	4.09E-02
9	GO:0005739: mitochondrion	4.82E-02