co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G53760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0005993: trehalose catabolic process	0.00E+00
2	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
3	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
4	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
5	GO:0046865: terpenoid transport	0.00E+00
6	GO:0018063: cytochrome c-heme linkage	0.00E+00
7	GO:0006983: ER overload response	0.00E+00
8	GO:1902009: positive regulation of toxin transport	0.00E+00
9	GO:0051553: flavone biosynthetic process	0.00E+00
10	GO:0010055: atrichoblast differentiation	0.00E+00
11	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
12	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
13	GO:1902001: fatty acid transmembrane transport	0.00E+00
14	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
15	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
16	GO:0030150: protein import into mitochondrial matrix	5.33E-06
17	GO:0009751: response to salicylic acid	1.07E-04
18	GO:1900057: positive regulation of leaf senescence	2.76E-04
19	GO:0051707: response to other organism	2.83E-04
20	GO:0033306: phytol metabolic process	3.29E-04
21	GO:0046246: terpene biosynthetic process	3.29E-04
22	GO:0050691: regulation of defense response to virus by host	3.29E-04
23	GO:0009968: negative regulation of signal transduction	3.29E-04
24	GO:1990542: mitochondrial transmembrane transport	3.29E-04
25	GO:0032107: regulation of response to nutrient levels	3.29E-04
26	GO:0043547: positive regulation of GTPase activity	3.29E-04
27	GO:1990641: response to iron ion starvation	3.29E-04
28	GO:0010112: regulation of systemic acquired resistance	5.12E-04
29	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.05E-04
30	GO:0042742: defense response to bacterium	6.73E-04
31	GO:0015908: fatty acid transport	7.18E-04
32	GO:0006101: citrate metabolic process	7.18E-04
33	GO:0043066: negative regulation of apoptotic process	7.18E-04
34	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	7.18E-04
35	GO:0015012: heparan sulfate proteoglycan biosynthetic process	7.18E-04
36	GO:0071668: plant-type cell wall assembly	7.18E-04
37	GO:0080183: response to photooxidative stress	7.18E-04
38	GO:0010155: regulation of proton transport	7.18E-04
39	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	7.18E-04
40	GO:0006024: glycosaminoglycan biosynthetic process	7.18E-04
41	GO:0055088: lipid homeostasis	7.18E-04
42	GO:0000266: mitochondrial fission	9.28E-04
43	GO:0080168: abscisic acid transport	1.16E-03
44	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	1.16E-03
45	GO:0080163: regulation of protein serine/threonine phosphatase activity	1.16E-03
46	GO:0071398: cellular response to fatty acid	1.16E-03
47	GO:0006065: UDP-glucuronate biosynthetic process	1.16E-03
48	GO:0015783: GDP-fucose transport	1.16E-03
49	GO:0009410: response to xenobiotic stimulus	1.16E-03
50	GO:0015692: lead ion transport	1.16E-03
51	GO:0052546: cell wall pectin metabolic process	1.16E-03
52	GO:0002237: response to molecule of bacterial origin	1.18E-03
53	GO:0010200: response to chitin	1.18E-03
54	GO:0015031: protein transport	1.19E-03
55	GO:0000162: tryptophan biosynthetic process	1.47E-03
56	GO:0009863: salicylic acid mediated signaling pathway	1.63E-03
57	GO:0010731: protein glutathionylation	1.67E-03
58	GO:0071323: cellular response to chitin	1.67E-03
59	GO:0080024: indolebutyric acid metabolic process	1.67E-03
60	GO:0055070: copper ion homeostasis	1.67E-03
61	GO:0001676: long-chain fatty acid metabolic process	1.67E-03
62	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.67E-03
63	GO:0051639: actin filament network formation	1.67E-03
64	GO:0002239: response to oomycetes	1.67E-03
65	GO:0006631: fatty acid metabolic process	1.73E-03
66	GO:0071456: cellular response to hypoxia	2.16E-03
67	GO:0006621: protein retention in ER lumen	2.24E-03
68	GO:0015867: ATP transport	2.24E-03
69	GO:0051764: actin crosslink formation	2.24E-03
70	GO:0009617: response to bacterium	2.35E-03
71	GO:0006097: glyoxylate cycle	2.87E-03
72	GO:0009229: thiamine diphosphate biosynthetic process	2.87E-03
73	GO:0007275: multicellular organism development	3.39E-03
74	GO:0045040: protein import into mitochondrial outer membrane	3.54E-03
75	GO:0009228: thiamine biosynthetic process	3.54E-03
76	GO:1900425: negative regulation of defense response to bacterium	3.54E-03
77	GO:0033365: protein localization to organelle	3.54E-03
78	GO:0006014: D-ribose metabolic process	3.54E-03
79	GO:0009759: indole glucosinolate biosynthetic process	3.54E-03
80	GO:0015866: ADP transport	3.54E-03
81	GO:0010256: endomembrane system organization	3.54E-03
82	GO:0009620: response to fungus	3.92E-03
83	GO:0002229: defense response to oomycetes	3.98E-03
84	GO:0010193: response to ozone	3.98E-03
85	GO:0045926: negative regulation of growth	4.26E-03
86	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	5.03E-03
87	GO:1902074: response to salt	5.03E-03
88	GO:0010044: response to aluminum ion	5.03E-03
89	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	5.03E-03
90	GO:1900056: negative regulation of leaf senescence	5.03E-03
91	GO:0051607: defense response to virus	5.44E-03
92	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.85E-03
93	GO:0009850: auxin metabolic process	5.85E-03
94	GO:0006605: protein targeting	5.85E-03
95	GO:0031540: regulation of anthocyanin biosynthetic process	5.85E-03
96	GO:0006102: isocitrate metabolic process	5.85E-03
97	GO:0016559: peroxisome fission	5.85E-03
98	GO:0010029: regulation of seed germination	6.09E-03
99	GO:0009816: defense response to bacterium, incompatible interaction	6.09E-03
100	GO:0010120: camalexin biosynthetic process	6.71E-03
101	GO:0006997: nucleus organization	6.71E-03
102	GO:0010204: defense response signaling pathway, resistance gene-independent	6.71E-03
103	GO:0017004: cytochrome complex assembly	6.71E-03
104	GO:0010208: pollen wall assembly	6.71E-03
105	GO:0019432: triglyceride biosynthetic process	7.60E-03
106	GO:0015780: nucleotide-sugar transport	7.60E-03
107	GO:0009835: fruit ripening	7.60E-03
108	GO:0007338: single fertilization	7.60E-03
109	GO:0009086: methionine biosynthetic process	8.55E-03
110	GO:0008202: steroid metabolic process	8.55E-03
111	GO:0010150: leaf senescence	8.84E-03
112	GO:0051555: flavonol biosynthetic process	9.53E-03
113	GO:0009870: defense response signaling pathway, resistance gene-dependent	9.53E-03
114	GO:0043069: negative regulation of programmed cell death	9.53E-03
115	GO:0010629: negative regulation of gene expression	9.53E-03
116	GO:0009753: response to jasmonic acid	9.77E-03
117	GO:0006099: tricarboxylic acid cycle	9.99E-03
118	GO:0006470: protein dephosphorylation	1.05E-02
119	GO:0007166: cell surface receptor signaling pathway	1.05E-02
120	GO:0019684: photosynthesis, light reaction	1.06E-02
121	GO:0009089: lysine biosynthetic process via diaminopimelate	1.06E-02
122	GO:0009684: indoleacetic acid biosynthetic process	1.06E-02
123	GO:0000038: very long-chain fatty acid metabolic process	1.06E-02
124	GO:0006839: mitochondrial transport	1.09E-02
125	GO:0045037: protein import into chloroplast stroma	1.16E-02
126	GO:2000012: regulation of auxin polar transport	1.27E-02
127	GO:0010102: lateral root morphogenesis	1.27E-02
128	GO:0006626: protein targeting to mitochondrion	1.27E-02
129	GO:0030036: actin cytoskeleton organization	1.27E-02
130	GO:0018107: peptidyl-threonine phosphorylation	1.27E-02
131	GO:0006855: drug transmembrane transport	1.44E-02
132	GO:0031347: regulation of defense response	1.50E-02
133	GO:0046688: response to copper ion	1.50E-02
134	GO:0090351: seedling development	1.50E-02
135	GO:0009846: pollen germination	1.55E-02
136	GO:0010224: response to UV-B	1.73E-02
137	GO:0000027: ribosomal large subunit assembly	1.75E-02
138	GO:0080147: root hair cell development	1.75E-02
139	GO:0051017: actin filament bundle assembly	1.75E-02
140	GO:0006289: nucleotide-excision repair	1.75E-02
141	GO:0009723: response to ethylene	1.86E-02
142	GO:0006825: copper ion transport	1.87E-02
143	GO:0009738: abscisic acid-activated signaling pathway	1.98E-02
144	GO:0009269: response to desiccation	2.00E-02
145	GO:0016114: terpenoid biosynthetic process	2.00E-02
146	GO:0006334: nucleosome assembly	2.00E-02
147	GO:0006979: response to oxidative stress	2.08E-02
148	GO:0009814: defense response, incompatible interaction	2.14E-02
149	GO:0016226: iron-sulfur cluster assembly	2.14E-02
150	GO:0031348: negative regulation of defense response	2.14E-02
151	GO:0009693: ethylene biosynthetic process	2.27E-02
152	GO:0009411: response to UV	2.27E-02
153	GO:0006012: galactose metabolic process	2.27E-02
154	GO:0042127: regulation of cell proliferation	2.41E-02
155	GO:0018105: peptidyl-serine phosphorylation	2.45E-02
156	GO:0006520: cellular amino acid metabolic process	2.85E-02
157	GO:0010182: sugar mediated signaling pathway	2.85E-02
158	GO:0009737: response to abscisic acid	2.90E-02
159	GO:0006623: protein targeting to vacuole	3.15E-02
160	GO:0009749: response to glucose	3.15E-02
161	GO:0019252: starch biosynthetic process	3.15E-02
162	GO:0071554: cell wall organization or biogenesis	3.31E-02
163	GO:0006635: fatty acid beta-oxidation	3.31E-02
164	GO:0032502: developmental process	3.47E-02
165	GO:0030163: protein catabolic process	3.63E-02
166	GO:0009567: double fertilization forming a zygote and endosperm	3.79E-02
167	GO:0006810: transport	3.90E-02
168	GO:0040008: regulation of growth	3.92E-02
169	GO:0006351: transcription, DNA-templated	4.25E-02
170	GO:0006906: vesicle fusion	4.65E-02
171	GO:0009627: systemic acquired resistance	4.65E-02
172	GO:0008380: RNA splicing	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
2	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
3	GO:0005212: structural constituent of eye lens	0.00E+00
4	GO:0050334: thiaminase activity	0.00E+00
5	GO:0005046: KDEL sequence binding	0.00E+00
6	GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity	0.00E+00
7	GO:0034338: short-chain carboxylesterase activity	0.00E+00
8	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
9	GO:0033759: flavone synthase activity	0.00E+00
10	GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity	0.00E+00
11	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
12	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
13	GO:0004834: tryptophan synthase activity	6.89E-05
14	GO:0102391: decanoate--CoA ligase activity	2.12E-04
15	GO:0004467: long-chain fatty acid-CoA ligase activity	2.76E-04
16	GO:0047150: betaine-homocysteine S-methyltransferase activity	3.29E-04
17	GO:0015245: fatty acid transporter activity	3.29E-04
18	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.29E-04
19	GO:0016920: pyroglutamyl-peptidase activity	3.29E-04
20	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.29E-04
21	GO:0015927: trehalase activity	3.29E-04
22	GO:0008483: transaminase activity	6.42E-04
23	GO:0016740: transferase activity	7.16E-04
24	GO:0000774: adenyl-nucleotide exchange factor activity	7.18E-04
25	GO:0032934: sterol binding	7.18E-04
26	GO:0050736: O-malonyltransferase activity	7.18E-04
27	GO:0015036: disulfide oxidoreductase activity	7.18E-04
28	GO:0003994: aconitate hydratase activity	7.18E-04
29	GO:0015266: protein channel activity	1.05E-03
30	GO:0032403: protein complex binding	1.16E-03
31	GO:0005457: GDP-fucose transmembrane transporter activity	1.16E-03
32	GO:0003979: UDP-glucose 6-dehydrogenase activity	1.16E-03
33	GO:0004324: ferredoxin-NADP+ reductase activity	1.16E-03
34	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.16E-03
35	GO:0016531: copper chaperone activity	1.16E-03
36	GO:0001046: core promoter sequence-specific DNA binding	1.63E-03
37	GO:0031418: L-ascorbic acid binding	1.63E-03
38	GO:0042803: protein homodimerization activity	1.66E-03
39	GO:0035529: NADH pyrophosphatase activity	1.67E-03
40	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.67E-03
41	GO:0017077: oxidative phosphorylation uncoupler activity	1.67E-03
42	GO:0046923: ER retention sequence binding	2.24E-03
43	GO:0004930: G-protein coupled receptor activity	2.24E-03
44	GO:0004623: phospholipase A2 activity	2.87E-03
45	GO:0047631: ADP-ribose diphosphatase activity	2.87E-03
46	GO:0000210: NAD+ diphosphatase activity	3.54E-03
47	GO:0004747: ribokinase activity	4.26E-03
48	GO:0003978: UDP-glucose 4-epimerase activity	4.26E-03
49	GO:0004144: diacylglycerol O-acyltransferase activity	4.26E-03
50	GO:0005347: ATP transmembrane transporter activity	4.26E-03
51	GO:0004656: procollagen-proline 4-dioxygenase activity	4.26E-03
52	GO:0015217: ADP transmembrane transporter activity	4.26E-03
53	GO:0005509: calcium ion binding	5.82E-03
54	GO:0047893: flavonol 3-O-glucosyltransferase activity	5.85E-03
55	GO:0052747: sinapyl alcohol dehydrogenase activity	5.85E-03
56	GO:0008865: fructokinase activity	5.85E-03
57	GO:0008375: acetylglucosaminyltransferase activity	6.44E-03
58	GO:0030170: pyridoxal phosphate binding	6.70E-03
59	GO:0008142: oxysterol binding	6.71E-03
60	GO:0030247: polysaccharide binding	6.79E-03
61	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	7.52E-03
62	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	7.60E-03
63	GO:0015297: antiporter activity	8.33E-03
64	GO:0004864: protein phosphatase inhibitor activity	9.53E-03
65	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	9.55E-03
66	GO:0051539: 4 iron, 4 sulfur cluster binding	1.09E-02
67	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.16E-02
68	GO:0004022: alcohol dehydrogenase (NAD) activity	1.27E-02
69	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.32E-02
70	GO:0043565: sequence-specific DNA binding	1.34E-02
71	GO:0008061: chitin binding	1.50E-02
72	GO:0003712: transcription cofactor activity	1.50E-02
73	GO:0051287: NAD binding	1.50E-02
74	GO:0051536: iron-sulfur cluster binding	1.75E-02
75	GO:0051087: chaperone binding	1.87E-02
76	GO:0035251: UDP-glucosyltransferase activity	2.00E-02
77	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.41E-02
78	GO:0005102: receptor binding	2.55E-02
79	GO:0004722: protein serine/threonine phosphatase activity	2.85E-02
80	GO:0050662: coenzyme binding	3.00E-02
81	GO:0046872: metal ion binding	3.01E-02
82	GO:0005515: protein binding	3.04E-02
83	GO:0004872: receptor activity	3.15E-02
84	GO:0051015: actin filament binding	3.63E-02
85	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.83E-02
86	GO:0008237: metallopeptidase activity	3.96E-02
87	GO:0016413: O-acetyltransferase activity	4.13E-02
88	GO:0008194: UDP-glycosyltransferase activity	4.58E-02
89	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.65E-02
90	GO:0004806: triglyceride lipase activity	4.82E-02
91	GO:0004683: calmodulin-dependent protein kinase activity	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	5.70E-06
2	GO:0005743: mitochondrial inner membrane	1.29E-05
3	GO:0005794: Golgi apparatus	2.39E-04
4	GO:0045252: oxoglutarate dehydrogenase complex	3.29E-04
5	GO:0001405: presequence translocase-associated import motor	3.29E-04
6	GO:0031314: extrinsic component of mitochondrial inner membrane	7.18E-04
7	GO:0032432: actin filament bundle	1.67E-03
8	GO:0030658: transport vesicle membrane	1.67E-03
9	GO:0005789: endoplasmic reticulum membrane	1.85E-03
10	GO:0005741: mitochondrial outer membrane	1.97E-03
11	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.56E-03
12	GO:0000813: ESCRT I complex	2.87E-03
13	GO:0000164: protein phosphatase type 1 complex	2.87E-03
14	GO:0005801: cis-Golgi network	4.26E-03
15	GO:0031305: integral component of mitochondrial inner membrane	5.85E-03
16	GO:0005779: integral component of peroxisomal membrane	6.71E-03
17	GO:0005742: mitochondrial outer membrane translocase complex	6.71E-03
18	GO:0030665: clathrin-coated vesicle membrane	8.55E-03
19	GO:0017119: Golgi transport complex	9.53E-03
20	GO:0005884: actin filament	1.06E-02
21	GO:0031902: late endosome membrane	1.14E-02
22	GO:0031307: integral component of mitochondrial outer membrane	1.16E-02
23	GO:0005783: endoplasmic reticulum	1.30E-02
24	GO:0005795: Golgi stack	1.50E-02
25	GO:0005758: mitochondrial intermembrane space	1.75E-02
26	GO:0005635: nuclear envelope	1.79E-02
27	GO:0009706: chloroplast inner membrane	2.38E-02
28	GO:0005777: peroxisome	2.56E-02
29	GO:0009543: chloroplast thylakoid lumen	2.98E-02
30	GO:0005623: cell	3.06E-02
31	GO:0009504: cell plate	3.15E-02
32	GO:0031965: nuclear membrane	3.15E-02
33	GO:0019898: extrinsic component of membrane	3.15E-02
34	GO:0005778: peroxisomal membrane	3.96E-02
35	GO:0005802: trans-Golgi network	4.15E-02