GO Enrichment Analysis of Co-expressed Genes with
AT1G53750
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006858: extracellular transport | 0.00E+00 |
| 2 | GO:0046680: response to DDT | 0.00E+00 |
| 3 | GO:2000117: negative regulation of cysteine-type endopeptidase activity | 0.00E+00 |
| 4 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.86E-07 |
| 5 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.07E-05 |
| 6 | GO:0009646: response to absence of light | 6.15E-05 |
| 7 | GO:0006144: purine nucleobase metabolic process | 1.31E-04 |
| 8 | GO:0019628: urate catabolic process | 1.31E-04 |
| 9 | GO:0000032: cell wall mannoprotein biosynthetic process | 1.31E-04 |
| 10 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 1.31E-04 |
| 11 | GO:0010372: positive regulation of gibberellin biosynthetic process | 3.03E-04 |
| 12 | GO:0090630: activation of GTPase activity | 4.99E-04 |
| 13 | GO:0006517: protein deglycosylation | 4.99E-04 |
| 14 | GO:0001927: exocyst assembly | 4.99E-04 |
| 15 | GO:0033591: response to L-ascorbic acid | 4.99E-04 |
| 16 | GO:0010359: regulation of anion channel activity | 4.99E-04 |
| 17 | GO:0043617: cellular response to sucrose starvation | 4.99E-04 |
| 18 | GO:0001676: long-chain fatty acid metabolic process | 7.14E-04 |
| 19 | GO:0009298: GDP-mannose biosynthetic process | 7.14E-04 |
| 20 | GO:0051601: exocyst localization | 7.14E-04 |
| 21 | GO:0010222: stem vascular tissue pattern formation | 9.47E-04 |
| 22 | GO:0006536: glutamate metabolic process | 9.47E-04 |
| 23 | GO:0010363: regulation of plant-type hypersensitive response | 9.47E-04 |
| 24 | GO:0046686: response to cadmium ion | 1.19E-03 |
| 25 | GO:0006461: protein complex assembly | 1.20E-03 |
| 26 | GO:0009823: cytokinin catabolic process | 1.20E-03 |
| 27 | GO:0018279: protein N-linked glycosylation via asparagine | 1.20E-03 |
| 28 | GO:0006564: L-serine biosynthetic process | 1.20E-03 |
| 29 | GO:0030163: protein catabolic process | 1.25E-03 |
| 30 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.47E-03 |
| 31 | GO:0009651: response to salt stress | 1.67E-03 |
| 32 | GO:0009554: megasporogenesis | 1.76E-03 |
| 33 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.76E-03 |
| 34 | GO:0000338: protein deneddylation | 2.06E-03 |
| 35 | GO:0010043: response to zinc ion | 2.37E-03 |
| 36 | GO:0006491: N-glycan processing | 2.39E-03 |
| 37 | GO:0006402: mRNA catabolic process | 2.39E-03 |
| 38 | GO:0006972: hyperosmotic response | 2.73E-03 |
| 39 | GO:0060321: acceptance of pollen | 2.73E-03 |
| 40 | GO:0006897: endocytosis | 3.07E-03 |
| 41 | GO:0046685: response to arsenic-containing substance | 3.08E-03 |
| 42 | GO:0009821: alkaloid biosynthetic process | 3.08E-03 |
| 43 | GO:0009744: response to sucrose | 3.32E-03 |
| 44 | GO:0009688: abscisic acid biosynthetic process | 3.84E-03 |
| 45 | GO:0043069: negative regulation of programmed cell death | 3.84E-03 |
| 46 | GO:0055085: transmembrane transport | 4.07E-03 |
| 47 | GO:0072593: reactive oxygen species metabolic process | 4.24E-03 |
| 48 | GO:0043085: positive regulation of catalytic activity | 4.24E-03 |
| 49 | GO:0016925: protein sumoylation | 4.65E-03 |
| 50 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 4.65E-03 |
| 51 | GO:0006790: sulfur compound metabolic process | 4.65E-03 |
| 52 | GO:0006820: anion transport | 4.65E-03 |
| 53 | GO:0006829: zinc II ion transport | 5.08E-03 |
| 54 | GO:0006807: nitrogen compound metabolic process | 5.08E-03 |
| 55 | GO:0006096: glycolytic process | 5.28E-03 |
| 56 | GO:0034605: cellular response to heat | 5.52E-03 |
| 57 | GO:0046854: phosphatidylinositol phosphorylation | 5.97E-03 |
| 58 | GO:0007031: peroxisome organization | 5.97E-03 |
| 59 | GO:0019853: L-ascorbic acid biosynthetic process | 5.97E-03 |
| 60 | GO:0018105: peptidyl-serine phosphorylation | 6.54E-03 |
| 61 | GO:0015992: proton transport | 7.91E-03 |
| 62 | GO:0009058: biosynthetic process | 8.38E-03 |
| 63 | GO:0030433: ubiquitin-dependent ERAD pathway | 8.42E-03 |
| 64 | GO:0010227: floral organ abscission | 8.95E-03 |
| 65 | GO:0042744: hydrogen peroxide catabolic process | 9.06E-03 |
| 66 | GO:0009306: protein secretion | 9.49E-03 |
| 67 | GO:0010089: xylem development | 9.49E-03 |
| 68 | GO:0009561: megagametogenesis | 9.49E-03 |
| 69 | GO:0051028: mRNA transport | 1.00E-02 |
| 70 | GO:0010118: stomatal movement | 1.06E-02 |
| 71 | GO:0008360: regulation of cell shape | 1.12E-02 |
| 72 | GO:0006662: glycerol ether metabolic process | 1.12E-02 |
| 73 | GO:0009739: response to gibberellin | 1.23E-02 |
| 74 | GO:0009851: auxin biosynthetic process | 1.24E-02 |
| 75 | GO:0007166: cell surface receptor signaling pathway | 1.26E-02 |
| 76 | GO:0010193: response to ozone | 1.30E-02 |
| 77 | GO:0031047: gene silencing by RNA | 1.36E-02 |
| 78 | GO:1901657: glycosyl compound metabolic process | 1.42E-02 |
| 79 | GO:0006914: autophagy | 1.49E-02 |
| 80 | GO:0016579: protein deubiquitination | 1.62E-02 |
| 81 | GO:0009826: unidimensional cell growth | 1.64E-02 |
| 82 | GO:0009615: response to virus | 1.68E-02 |
| 83 | GO:0006950: response to stress | 1.89E-02 |
| 84 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.89E-02 |
| 85 | GO:0010311: lateral root formation | 2.11E-02 |
| 86 | GO:0006811: ion transport | 2.18E-02 |
| 87 | GO:0006499: N-terminal protein myristoylation | 2.18E-02 |
| 88 | GO:0007568: aging | 2.25E-02 |
| 89 | GO:0010119: regulation of stomatal movement | 2.25E-02 |
| 90 | GO:0006099: tricarboxylic acid cycle | 2.48E-02 |
| 91 | GO:0034599: cellular response to oxidative stress | 2.48E-02 |
| 92 | GO:0030001: metal ion transport | 2.64E-02 |
| 93 | GO:0006887: exocytosis | 2.72E-02 |
| 94 | GO:0006631: fatty acid metabolic process | 2.72E-02 |
| 95 | GO:0009926: auxin polar transport | 2.88E-02 |
| 96 | GO:0009640: photomorphogenesis | 2.88E-02 |
| 97 | GO:0009751: response to salicylic acid | 3.08E-02 |
| 98 | GO:0006855: drug transmembrane transport | 3.22E-02 |
| 99 | GO:0031347: regulation of defense response | 3.30E-02 |
| 100 | GO:0009753: response to jasmonic acid | 3.35E-02 |
| 101 | GO:0009664: plant-type cell wall organization | 3.39E-02 |
| 102 | GO:0009809: lignin biosynthetic process | 3.56E-02 |
| 103 | GO:0006486: protein glycosylation | 3.56E-02 |
| 104 | GO:0009585: red, far-red light phototransduction | 3.56E-02 |
| 105 | GO:0015031: protein transport | 4.22E-02 |
| 106 | GO:0009620: response to fungus | 4.29E-02 |
| 107 | GO:0009624: response to nematode | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group | 0.00E+00 |
| 2 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 3 | GO:0004298: threonine-type endopeptidase activity | 5.75E-09 |
| 4 | GO:0008233: peptidase activity | 9.03E-05 |
| 5 | GO:0010013: N-1-naphthylphthalamic acid binding | 1.31E-04 |
| 6 | GO:0019786: Atg8-specific protease activity | 1.31E-04 |
| 7 | GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | 1.31E-04 |
| 8 | GO:0048037: cofactor binding | 1.31E-04 |
| 9 | GO:0004476: mannose-6-phosphate isomerase activity | 1.31E-04 |
| 10 | GO:0030955: potassium ion binding | 1.62E-04 |
| 11 | GO:0004743: pyruvate kinase activity | 1.62E-04 |
| 12 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.66E-04 |
| 13 | GO:0008517: folic acid transporter activity | 3.03E-04 |
| 14 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 3.03E-04 |
| 15 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.03E-04 |
| 16 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 3.03E-04 |
| 17 | GO:0019779: Atg8 activating enzyme activity | 3.03E-04 |
| 18 | GO:0052692: raffinose alpha-galactosidase activity | 4.99E-04 |
| 19 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 4.99E-04 |
| 20 | GO:0004848: ureidoglycolate hydrolase activity | 4.99E-04 |
| 21 | GO:0004557: alpha-galactosidase activity | 4.99E-04 |
| 22 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 4.99E-04 |
| 23 | GO:0004351: glutamate decarboxylase activity | 7.14E-04 |
| 24 | GO:0004031: aldehyde oxidase activity | 9.47E-04 |
| 25 | GO:0050302: indole-3-acetaldehyde oxidase activity | 9.47E-04 |
| 26 | GO:0019776: Atg8 ligase activity | 9.47E-04 |
| 27 | GO:0004518: nuclease activity | 1.18E-03 |
| 28 | GO:0031386: protein tag | 1.20E-03 |
| 29 | GO:0019139: cytokinin dehydrogenase activity | 1.20E-03 |
| 30 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.20E-03 |
| 31 | GO:0031593: polyubiquitin binding | 1.47E-03 |
| 32 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.47E-03 |
| 33 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.47E-03 |
| 34 | GO:0036402: proteasome-activating ATPase activity | 1.47E-03 |
| 35 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.76E-03 |
| 36 | GO:0102391: decanoate--CoA ligase activity | 1.76E-03 |
| 37 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.06E-03 |
| 38 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.37E-03 |
| 39 | GO:0015288: porin activity | 2.39E-03 |
| 40 | GO:0008308: voltage-gated anion channel activity | 2.73E-03 |
| 41 | GO:0000166: nucleotide binding | 2.83E-03 |
| 42 | GO:0016844: strictosidine synthase activity | 3.46E-03 |
| 43 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 3.84E-03 |
| 44 | GO:0008047: enzyme activator activity | 3.84E-03 |
| 45 | GO:0004177: aminopeptidase activity | 4.24E-03 |
| 46 | GO:0008559: xenobiotic-transporting ATPase activity | 4.24E-03 |
| 47 | GO:0008131: primary amine oxidase activity | 5.52E-03 |
| 48 | GO:0017025: TBP-class protein binding | 5.97E-03 |
| 49 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 7.91E-03 |
| 50 | GO:0030170: pyridoxal phosphate binding | 8.83E-03 |
| 51 | GO:0047134: protein-disulfide reductase activity | 1.00E-02 |
| 52 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.02E-02 |
| 53 | GO:0046873: metal ion transmembrane transporter activity | 1.12E-02 |
| 54 | GO:0004791: thioredoxin-disulfide reductase activity | 1.18E-02 |
| 55 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 1.30E-02 |
| 56 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.40E-02 |
| 57 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.42E-02 |
| 58 | GO:0008237: metallopeptidase activity | 1.55E-02 |
| 59 | GO:0016597: amino acid binding | 1.62E-02 |
| 60 | GO:0000287: magnesium ion binding | 1.67E-02 |
| 61 | GO:0004601: peroxidase activity | 1.71E-02 |
| 62 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.82E-02 |
| 63 | GO:0004683: calmodulin-dependent protein kinase activity | 1.89E-02 |
| 64 | GO:0102483: scopolin beta-glucosidase activity | 1.89E-02 |
| 65 | GO:0050660: flavin adenine dinucleotide binding | 1.97E-02 |
| 66 | GO:0005096: GTPase activator activity | 2.11E-02 |
| 67 | GO:0005516: calmodulin binding | 2.17E-02 |
| 68 | GO:0003746: translation elongation factor activity | 2.41E-02 |
| 69 | GO:0008422: beta-glucosidase activity | 2.56E-02 |
| 70 | GO:0016787: hydrolase activity | 2.59E-02 |
| 71 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.05E-02 |
| 72 | GO:0005198: structural molecule activity | 3.13E-02 |
| 73 | GO:0051287: NAD binding | 3.30E-02 |
| 74 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.56E-02 |
| 75 | GO:0016298: lipase activity | 3.65E-02 |
| 76 | GO:0015035: protein disulfide oxidoreductase activity | 4.67E-02 |
| 77 | GO:0008026: ATP-dependent helicase activity | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 4.08E-11 |
| 2 | GO:0005839: proteasome core complex | 5.75E-09 |
| 3 | GO:0005829: cytosol | 4.99E-07 |
| 4 | GO:0005773: vacuole | 3.00E-05 |
| 5 | GO:0016442: RISC complex | 1.31E-04 |
| 6 | GO:0005774: vacuolar membrane | 1.41E-04 |
| 7 | GO:0048471: perinuclear region of cytoplasm | 2.24E-04 |
| 8 | GO:0046861: glyoxysomal membrane | 4.99E-04 |
| 9 | GO:0005775: vacuolar lumen | 7.14E-04 |
| 10 | GO:0005618: cell wall | 7.48E-04 |
| 11 | GO:0005776: autophagosome | 9.47E-04 |
| 12 | GO:0008250: oligosaccharyltransferase complex | 1.20E-03 |
| 13 | GO:0031597: cytosolic proteasome complex | 1.76E-03 |
| 14 | GO:0031595: nuclear proteasome complex | 2.06E-03 |
| 15 | GO:0000421: autophagosome membrane | 2.39E-03 |
| 16 | GO:0046930: pore complex | 2.73E-03 |
| 17 | GO:0009514: glyoxysome | 2.73E-03 |
| 18 | GO:0019773: proteasome core complex, alpha-subunit complex | 2.73E-03 |
| 19 | GO:0010494: cytoplasmic stress granule | 3.08E-03 |
| 20 | GO:0008180: COP9 signalosome | 3.08E-03 |
| 21 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.46E-03 |
| 22 | GO:0008541: proteasome regulatory particle, lid subcomplex | 4.24E-03 |
| 23 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.65E-03 |
| 24 | GO:0005635: nuclear envelope | 4.78E-03 |
| 25 | GO:0005802: trans-Golgi network | 5.79E-03 |
| 26 | GO:0000419: DNA-directed RNA polymerase V complex | 6.43E-03 |
| 27 | GO:0005737: cytoplasm | 6.63E-03 |
| 28 | GO:0005768: endosome | 7.04E-03 |
| 29 | GO:0005741: mitochondrial outer membrane | 7.91E-03 |
| 30 | GO:0031410: cytoplasmic vesicle | 8.42E-03 |
| 31 | GO:0009506: plasmodesma | 1.28E-02 |
| 32 | GO:0000145: exocyst | 1.36E-02 |
| 33 | GO:0000932: P-body | 1.68E-02 |
| 34 | GO:0005886: plasma membrane | 2.02E-02 |
| 35 | GO:0005643: nuclear pore | 2.03E-02 |
| 36 | GO:0005783: endoplasmic reticulum | 2.23E-02 |
| 37 | GO:0000325: plant-type vacuole | 2.25E-02 |
| 38 | GO:0005794: Golgi apparatus | 2.54E-02 |
| 39 | GO:0005856: cytoskeleton | 3.13E-02 |
| 40 | GO:0005834: heterotrimeric G-protein complex | 4.20E-02 |