GO Enrichment Analysis of Co-expressed Genes with
AT1G52900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048034: heme O biosynthetic process | 0.00E+00 |
| 2 | GO:0009821: alkaloid biosynthetic process | 3.12E-05 |
| 3 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 5.03E-05 |
| 4 | GO:0042964: thioredoxin reduction | 5.03E-05 |
| 5 | GO:0046939: nucleotide phosphorylation | 1.23E-04 |
| 6 | GO:0010372: positive regulation of gibberellin biosynthetic process | 1.23E-04 |
| 7 | GO:0055074: calcium ion homeostasis | 2.11E-04 |
| 8 | GO:0009058: biosynthetic process | 2.34E-04 |
| 9 | GO:0042744: hydrogen peroxide catabolic process | 2.60E-04 |
| 10 | GO:0006878: cellular copper ion homeostasis | 4.15E-04 |
| 11 | GO:0006536: glutamate metabolic process | 4.15E-04 |
| 12 | GO:0046686: response to cadmium ion | 4.59E-04 |
| 13 | GO:0009615: response to virus | 4.65E-04 |
| 14 | GO:0046283: anthocyanin-containing compound metabolic process | 5.26E-04 |
| 15 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 6.44E-04 |
| 16 | GO:0006561: proline biosynthetic process | 6.44E-04 |
| 17 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 6.44E-04 |
| 18 | GO:0009554: megasporogenesis | 7.68E-04 |
| 19 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 7.68E-04 |
| 20 | GO:1900056: negative regulation of leaf senescence | 8.97E-04 |
| 21 | GO:0006402: mRNA catabolic process | 1.03E-03 |
| 22 | GO:0019430: removal of superoxide radicals | 1.17E-03 |
| 23 | GO:0010120: camalexin biosynthetic process | 1.17E-03 |
| 24 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.17E-03 |
| 25 | GO:0007186: G-protein coupled receptor signaling pathway | 1.17E-03 |
| 26 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.17E-03 |
| 27 | GO:0006979: response to oxidative stress | 1.18E-03 |
| 28 | GO:0006783: heme biosynthetic process | 1.32E-03 |
| 29 | GO:2000280: regulation of root development | 1.47E-03 |
| 30 | GO:0006096: glycolytic process | 1.50E-03 |
| 31 | GO:0009688: abscisic acid biosynthetic process | 1.63E-03 |
| 32 | GO:0009620: response to fungus | 1.64E-03 |
| 33 | GO:0072593: reactive oxygen species metabolic process | 1.79E-03 |
| 34 | GO:0016925: protein sumoylation | 1.96E-03 |
| 35 | GO:0006790: sulfur compound metabolic process | 1.96E-03 |
| 36 | GO:0009718: anthocyanin-containing compound biosynthetic process | 2.14E-03 |
| 37 | GO:0006829: zinc II ion transport | 2.14E-03 |
| 38 | GO:0006807: nitrogen compound metabolic process | 2.14E-03 |
| 39 | GO:0034605: cellular response to heat | 2.32E-03 |
| 40 | GO:0046854: phosphatidylinositol phosphorylation | 2.50E-03 |
| 41 | GO:0010167: response to nitrate | 2.50E-03 |
| 42 | GO:0005992: trehalose biosynthetic process | 2.88E-03 |
| 43 | GO:0045333: cellular respiration | 2.88E-03 |
| 44 | GO:0010150: leaf senescence | 3.07E-03 |
| 45 | GO:0006874: cellular calcium ion homeostasis | 3.08E-03 |
| 46 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.50E-03 |
| 47 | GO:0009306: protein secretion | 3.93E-03 |
| 48 | GO:0010089: xylem development | 3.93E-03 |
| 49 | GO:0051028: mRNA transport | 4.15E-03 |
| 50 | GO:0010118: stomatal movement | 4.37E-03 |
| 51 | GO:0009851: auxin biosynthetic process | 5.07E-03 |
| 52 | GO:0010183: pollen tube guidance | 5.07E-03 |
| 53 | GO:0009723: response to ethylene | 5.46E-03 |
| 54 | GO:0031047: gene silencing by RNA | 5.56E-03 |
| 55 | GO:0010252: auxin homeostasis | 6.07E-03 |
| 56 | GO:0006906: vesicle fusion | 7.40E-03 |
| 57 | GO:0016049: cell growth | 7.96E-03 |
| 58 | GO:0009751: response to salicylic acid | 8.51E-03 |
| 59 | GO:0006499: N-terminal protein myristoylation | 8.82E-03 |
| 60 | GO:0009753: response to jasmonic acid | 9.26E-03 |
| 61 | GO:0006099: tricarboxylic acid cycle | 1.00E-02 |
| 62 | GO:0030001: metal ion transport | 1.07E-02 |
| 63 | GO:0006887: exocytosis | 1.10E-02 |
| 64 | GO:0055114: oxidation-reduction process | 1.15E-02 |
| 65 | GO:0009926: auxin polar transport | 1.16E-02 |
| 66 | GO:0006855: drug transmembrane transport | 1.30E-02 |
| 67 | GO:0009664: plant-type cell wall organization | 1.37E-02 |
| 68 | GO:0009846: pollen germination | 1.37E-02 |
| 69 | GO:0042538: hyperosmotic salinity response | 1.37E-02 |
| 70 | GO:0009809: lignin biosynthetic process | 1.44E-02 |
| 71 | GO:0009416: response to light stimulus | 1.54E-02 |
| 72 | GO:0009611: response to wounding | 1.57E-02 |
| 73 | GO:0048316: seed development | 1.65E-02 |
| 74 | GO:0009626: plant-type hypersensitive response | 1.69E-02 |
| 75 | GO:0009624: response to nematode | 1.84E-02 |
| 76 | GO:0055085: transmembrane transport | 1.95E-02 |
| 77 | GO:0007166: cell surface receptor signaling pathway | 2.99E-02 |
| 78 | GO:0042742: defense response to bacterium | 3.12E-02 |
| 79 | GO:0009826: unidimensional cell growth | 3.61E-02 |
| 80 | GO:0015031: protein transport | 3.95E-02 |
| 81 | GO:0016192: vesicle-mediated transport | 4.48E-02 |
| 82 | GO:0045454: cell redox homeostasis | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051765: inositol tetrakisphosphate kinase activity | 0.00E+00 |
| 2 | GO:0008495: protoheme IX farnesyltransferase activity | 0.00E+00 |
| 3 | GO:0051766: inositol trisphosphate kinase activity | 0.00E+00 |
| 4 | GO:0030955: potassium ion binding | 3.83E-05 |
| 5 | GO:0016844: strictosidine synthase activity | 3.83E-05 |
| 6 | GO:0004743: pyruvate kinase activity | 3.83E-05 |
| 7 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 5.03E-05 |
| 8 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 5.03E-05 |
| 9 | GO:0048037: cofactor binding | 5.03E-05 |
| 10 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 5.03E-05 |
| 11 | GO:0010013: N-1-naphthylphthalamic acid binding | 5.03E-05 |
| 12 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 5.03E-05 |
| 13 | GO:0008517: folic acid transporter activity | 1.23E-04 |
| 14 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.23E-04 |
| 15 | GO:0004566: beta-glucuronidase activity | 1.23E-04 |
| 16 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.23E-04 |
| 17 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 2.11E-04 |
| 18 | GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity | 3.09E-04 |
| 19 | GO:0004351: glutamate decarboxylase activity | 3.09E-04 |
| 20 | GO:0019201: nucleotide kinase activity | 3.09E-04 |
| 21 | GO:0004518: nuclease activity | 3.45E-04 |
| 22 | GO:0004031: aldehyde oxidase activity | 4.15E-04 |
| 23 | GO:0050302: indole-3-acetaldehyde oxidase activity | 4.15E-04 |
| 24 | GO:0010279: indole-3-acetic acid amido synthetase activity | 4.15E-04 |
| 25 | GO:0004659: prenyltransferase activity | 4.15E-04 |
| 26 | GO:0004930: G-protein coupled receptor activity | 4.15E-04 |
| 27 | GO:0031386: protein tag | 5.26E-04 |
| 28 | GO:0004601: peroxidase activity | 5.85E-04 |
| 29 | GO:0031593: polyubiquitin binding | 6.44E-04 |
| 30 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 6.44E-04 |
| 31 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 6.44E-04 |
| 32 | GO:0036402: proteasome-activating ATPase activity | 6.44E-04 |
| 33 | GO:0004017: adenylate kinase activity | 7.68E-04 |
| 34 | GO:0004602: glutathione peroxidase activity | 7.68E-04 |
| 35 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 7.68E-04 |
| 36 | GO:0004311: farnesyltranstransferase activity | 1.03E-03 |
| 37 | GO:0004177: aminopeptidase activity | 1.79E-03 |
| 38 | GO:0008559: xenobiotic-transporting ATPase activity | 1.79E-03 |
| 39 | GO:0046872: metal ion binding | 2.24E-03 |
| 40 | GO:0030170: pyridoxal phosphate binding | 2.48E-03 |
| 41 | GO:0017025: TBP-class protein binding | 2.50E-03 |
| 42 | GO:0004970: ionotropic glutamate receptor activity | 2.50E-03 |
| 43 | GO:0005217: intracellular ligand-gated ion channel activity | 2.50E-03 |
| 44 | GO:0005507: copper ion binding | 3.95E-03 |
| 45 | GO:0005199: structural constituent of cell wall | 4.60E-03 |
| 46 | GO:0046873: metal ion transmembrane transporter activity | 4.60E-03 |
| 47 | GO:0000287: magnesium ion binding | 4.64E-03 |
| 48 | GO:0016788: hydrolase activity, acting on ester bonds | 4.82E-03 |
| 49 | GO:0004791: thioredoxin-disulfide reductase activity | 4.83E-03 |
| 50 | GO:0030145: manganese ion binding | 9.12E-03 |
| 51 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 9.12E-03 |
| 52 | GO:0003993: acid phosphatase activity | 1.00E-02 |
| 53 | GO:0000149: SNARE binding | 1.03E-02 |
| 54 | GO:0020037: heme binding | 1.10E-02 |
| 55 | GO:0005484: SNAP receptor activity | 1.16E-02 |
| 56 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.23E-02 |
| 57 | GO:0016298: lipase activity | 1.47E-02 |
| 58 | GO:0000166: nucleotide binding | 1.54E-02 |
| 59 | GO:0045735: nutrient reservoir activity | 1.62E-02 |
| 60 | GO:0051082: unfolded protein binding | 1.84E-02 |
| 61 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.59E-02 |
| 62 | GO:0016301: kinase activity | 2.85E-02 |
| 63 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.23E-02 |
| 64 | GO:0043531: ADP binding | 3.96E-02 |
| 65 | GO:0050660: flavin adenine dinucleotide binding | 4.12E-02 |
| 66 | GO:0003729: mRNA binding | 4.62E-02 |
| 67 | GO:0052689: carboxylic ester hydrolase activity | 4.64E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016442: RISC complex | 5.03E-05 |
| 2 | GO:0009530: primary cell wall | 2.11E-04 |
| 3 | GO:0005829: cytosol | 3.89E-04 |
| 4 | GO:0005886: plasma membrane | 4.38E-04 |
| 5 | GO:0005618: cell wall | 5.70E-04 |
| 6 | GO:0031597: cytosolic proteasome complex | 7.68E-04 |
| 7 | GO:0031595: nuclear proteasome complex | 8.97E-04 |
| 8 | GO:0000502: proteasome complex | 1.28E-03 |
| 9 | GO:0010494: cytoplasmic stress granule | 1.32E-03 |
| 10 | GO:0005635: nuclear envelope | 1.36E-03 |
| 11 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.47E-03 |
| 12 | GO:0048471: perinuclear region of cytoplasm | 1.79E-03 |
| 13 | GO:0005765: lysosomal membrane | 1.79E-03 |
| 14 | GO:0005773: vacuole | 3.92E-03 |
| 15 | GO:0005783: endoplasmic reticulum | 6.33E-03 |
| 16 | GO:0000932: P-body | 6.85E-03 |
| 17 | GO:0005788: endoplasmic reticulum lumen | 7.12E-03 |
| 18 | GO:0005643: nuclear pore | 8.24E-03 |
| 19 | GO:0000325: plant-type vacuole | 9.12E-03 |
| 20 | GO:0031201: SNARE complex | 1.10E-02 |
| 21 | GO:0005794: Golgi apparatus | 1.10E-02 |
| 22 | GO:0090406: pollen tube | 1.16E-02 |
| 23 | GO:0005834: heterotrimeric G-protein complex | 1.69E-02 |
| 24 | GO:0005759: mitochondrial matrix | 2.54E-02 |
| 25 | GO:0005774: vacuolar membrane | 2.97E-02 |
| 26 | GO:0048046: apoplast | 3.16E-02 |
| 27 | GO:0009505: plant-type cell wall | 3.90E-02 |