co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G52750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
2	GO:0080127: fruit septum development	0.00E+00
3	GO:0045014: negative regulation of transcription by glucose	0.00E+00
4	GO:0000819: sister chromatid segregation	0.00E+00
5	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
6	GO:0048497: maintenance of floral organ identity	7.01E-05
7	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	2.53E-04
8	GO:0032958: inositol phosphate biosynthetic process	2.53E-04
9	GO:0006434: seryl-tRNA aminoacylation	2.53E-04
10	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.53E-04
11	GO:0006438: valyl-tRNA aminoacylation	2.53E-04
12	GO:0046520: sphingoid biosynthetic process	2.53E-04
13	GO:0010583: response to cyclopentenone	3.07E-04
14	GO:0043039: tRNA aminoacylation	5.59E-04
15	GO:1901529: positive regulation of anion channel activity	5.59E-04
16	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	9.07E-04
17	GO:0010226: response to lithium ion	9.07E-04
18	GO:0030001: metal ion transport	1.01E-03
19	GO:0016042: lipid catabolic process	1.07E-03
20	GO:0009558: embryo sac cellularization	1.29E-03
21	GO:0010321: regulation of vegetative phase change	1.29E-03
22	GO:0006020: inositol metabolic process	1.29E-03
23	GO:0051513: regulation of monopolar cell growth	1.29E-03
24	GO:0007276: gamete generation	1.29E-03
25	GO:0009736: cytokinin-activated signaling pathway	1.72E-03
26	GO:0042991: transcription factor import into nucleus	1.73E-03
27	GO:0042127: regulation of cell proliferation	1.75E-03
28	GO:0009741: response to brassinosteroid	2.21E-03
29	GO:0007018: microtubule-based movement	2.37E-03
30	GO:0048825: cotyledon development	2.54E-03
31	GO:0009913: epidermal cell differentiation	2.72E-03
32	GO:1902456: regulation of stomatal opening	2.72E-03
33	GO:0003006: developmental process involved in reproduction	2.72E-03
34	GO:0010942: positive regulation of cell death	2.72E-03
35	GO:0010358: leaf shaping	2.72E-03
36	GO:0016554: cytidine to uridine editing	2.72E-03
37	GO:0006351: transcription, DNA-templated	2.81E-03
38	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.83E-03
39	GO:0051726: regulation of cell cycle	2.90E-03
40	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.27E-03
41	GO:0010444: guard mother cell differentiation	3.86E-03
42	GO:0000712: resolution of meiotic recombination intermediates	3.86E-03
43	GO:1900056: negative regulation of leaf senescence	3.86E-03
44	GO:0000082: G1/S transition of mitotic cell cycle	3.86E-03
45	GO:0010492: maintenance of shoot apical meristem identity	4.48E-03
46	GO:0010497: plasmodesmata-mediated intercellular transport	5.13E-03
47	GO:0000160: phosphorelay signal transduction system	5.37E-03
48	GO:0046916: cellular transition metal ion homeostasis	5.81E-03
49	GO:0000373: Group II intron splicing	5.81E-03
50	GO:0048589: developmental growth	5.81E-03
51	GO:0009056: catabolic process	5.81E-03
52	GO:0010332: response to gamma radiation	5.81E-03
53	GO:0048507: meristem development	5.81E-03
54	GO:0006468: protein phosphorylation	5.97E-03
55	GO:1900865: chloroplast RNA modification	6.52E-03
56	GO:0009641: shade avoidance	7.26E-03
57	GO:0016441: posttranscriptional gene silencing	7.26E-03
58	GO:0006949: syncytium formation	7.26E-03
59	GO:0006259: DNA metabolic process	7.26E-03
60	GO:0006782: protoporphyrinogen IX biosynthetic process	7.26E-03
61	GO:0006265: DNA topological change	8.04E-03
62	GO:0009750: response to fructose	8.04E-03
63	GO:0048229: gametophyte development	8.04E-03
64	GO:0009744: response to sucrose	8.35E-03
65	GO:0010152: pollen maturation	8.83E-03
66	GO:0006312: mitotic recombination	8.83E-03
67	GO:0012501: programmed cell death	8.83E-03
68	GO:0010582: floral meristem determinacy	8.83E-03
69	GO:0030048: actin filament-based movement	9.66E-03
70	GO:0010102: lateral root morphogenesis	9.66E-03
71	GO:0007034: vacuolar transport	1.05E-02
72	GO:0009887: animal organ morphogenesis	1.05E-02
73	GO:0006302: double-strand break repair	1.05E-02
74	GO:0048467: gynoecium development	1.05E-02
75	GO:0048366: leaf development	1.16E-02
76	GO:0006636: unsaturated fatty acid biosynthetic process	1.23E-02
77	GO:0051301: cell division	1.32E-02
78	GO:0019953: sexual reproduction	1.42E-02
79	GO:0006418: tRNA aminoacylation for protein translation	1.42E-02
80	GO:0051321: meiotic cell cycle	1.52E-02
81	GO:0045892: negative regulation of transcription, DNA-templated	1.59E-02
82	GO:0007005: mitochondrion organization	1.62E-02
83	GO:0009686: gibberellin biosynthetic process	1.72E-02
84	GO:0010091: trichome branching	1.83E-02
85	GO:0048443: stamen development	1.83E-02
86	GO:0010501: RNA secondary structure unwinding	2.05E-02
87	GO:0010118: stomatal movement	2.05E-02
88	GO:0010268: brassinosteroid homeostasis	2.16E-02
89	GO:0007059: chromosome segregation	2.27E-02
90	GO:0009749: response to glucose	2.39E-02
91	GO:0016132: brassinosteroid biosynthetic process	2.51E-02
92	GO:0071554: cell wall organization or biogenesis	2.51E-02
93	GO:0002229: defense response to oomycetes	2.51E-02
94	GO:0031047: gene silencing by RNA	2.63E-02
95	GO:0032502: developmental process	2.63E-02
96	GO:0040008: regulation of growth	2.66E-02
97	GO:0030163: protein catabolic process	2.75E-02
98	GO:0009828: plant-type cell wall loosening	2.87E-02
99	GO:0016125: sterol metabolic process	2.87E-02
100	GO:0019760: glucosinolate metabolic process	2.87E-02
101	GO:0051607: defense response to virus	3.13E-02
102	GO:0000910: cytokinesis	3.13E-02
103	GO:0006470: protein dephosphorylation	3.19E-02
104	GO:0007166: cell surface receptor signaling pathway	3.19E-02
105	GO:0071555: cell wall organization	3.32E-02
106	GO:0048573: photoperiodism, flowering	3.66E-02
107	GO:0015995: chlorophyll biosynthetic process	3.66E-02
108	GO:0009735: response to cytokinin	3.71E-02
109	GO:0016311: dephosphorylation	3.80E-02
110	GO:0009733: response to auxin	3.92E-02
111	GO:0048481: plant ovule development	3.93E-02
112	GO:0009817: defense response to fungus, incompatible interaction	3.93E-02
113	GO:0009826: unidimensional cell growth	4.14E-02
114	GO:0009867: jasmonic acid mediated signaling pathway	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0071633: dihydroceramidase activity	0.00E+00
2	GO:0047661: amino-acid racemase activity	0.00E+00
3	GO:0009899: ent-kaurene synthase activity	0.00E+00
4	GO:0052689: carboxylic ester hydrolase activity	1.23E-04
5	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.10E-04
6	GO:0004832: valine-tRNA ligase activity	2.53E-04
7	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	2.53E-04
8	GO:0010012: steroid 22-alpha hydroxylase activity	2.53E-04
9	GO:0000170: sphingosine hydroxylase activity	2.53E-04
10	GO:0000829: inositol heptakisphosphate kinase activity	2.53E-04
11	GO:0004828: serine-tRNA ligase activity	2.53E-04
12	GO:0000828: inositol hexakisphosphate kinase activity	2.53E-04
13	GO:0010296: prenylcysteine methylesterase activity	5.59E-04
14	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	5.59E-04
15	GO:0004109: coproporphyrinogen oxidase activity	5.59E-04
16	GO:0042284: sphingolipid delta-4 desaturase activity	5.59E-04
17	GO:0004722: protein serine/threonine phosphatase activity	9.14E-04
18	GO:0001872: (1->3)-beta-D-glucan binding	1.29E-03
19	GO:0003916: DNA topoisomerase activity	1.29E-03
20	GO:0010011: auxin binding	1.73E-03
21	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	1.73E-03
22	GO:0016298: lipase activity	1.80E-03
23	GO:0003777: microtubule motor activity	1.96E-03
24	GO:0016788: hydrolase activity, acting on ester bonds	1.99E-03
25	GO:0003779: actin binding	2.59E-03
26	GO:0005515: protein binding	2.83E-03
27	GO:0000156: phosphorelay response regulator activity	3.09E-03
28	GO:0016832: aldehyde-lyase activity	3.27E-03
29	GO:0004674: protein serine/threonine kinase activity	4.56E-03
30	GO:0046914: transition metal ion binding	5.13E-03
31	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	5.13E-03
32	GO:0003724: RNA helicase activity	5.13E-03
33	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.13E-03
34	GO:0009055: electron carrier activity	5.41E-03
35	GO:0019904: protein domain specific binding	8.04E-03
36	GO:0003725: double-stranded RNA binding	9.66E-03
37	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.05E-02
38	GO:0003774: motor activity	1.05E-02
39	GO:0003712: transcription cofactor activity	1.14E-02
40	GO:0004190: aspartic-type endopeptidase activity	1.14E-02
41	GO:0005524: ATP binding	1.44E-02
42	GO:0008094: DNA-dependent ATPase activity	1.52E-02
43	GO:0008408: 3'-5' exonuclease activity	1.52E-02
44	GO:0030570: pectate lyase activity	1.72E-02
45	GO:0004812: aminoacyl-tRNA ligase activity	1.94E-02
46	GO:0004672: protein kinase activity	2.03E-02
47	GO:0004527: exonuclease activity	2.16E-02
48	GO:0001085: RNA polymerase II transcription factor binding	2.16E-02
49	GO:0016853: isomerase activity	2.27E-02
50	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.30E-02
51	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.60E-02
52	GO:0004518: nuclease activity	2.63E-02
53	GO:0051015: actin filament binding	2.75E-02
54	GO:0046872: metal ion binding	2.78E-02
55	GO:0016759: cellulose synthase activity	2.87E-02
56	GO:0016791: phosphatase activity	2.87E-02
57	GO:0008017: microtubule binding	2.92E-02
58	GO:0005200: structural constituent of cytoskeleton	3.00E-02
59	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.01E-02
60	GO:0043565: sequence-specific DNA binding	3.04E-02
61	GO:0008289: lipid binding	3.07E-02
62	GO:0016413: O-acetyltransferase activity	3.13E-02
63	GO:0004721: phosphoprotein phosphatase activity	3.66E-02
64	GO:0004004: ATP-dependent RNA helicase activity	3.66E-02
65	GO:0030247: polysaccharide binding	3.66E-02
66	GO:0008236: serine-type peptidase activity	3.80E-02
67	GO:0030145: manganese ion binding	4.36E-02
68	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.36E-02
69	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.36E-02
70	GO:0003993: acid phosphatase activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	2.53E-04
3	GO:0030870: Mre11 complex	5.59E-04
4	GO:0046658: anchored component of plasma membrane	1.53E-03
5	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.73E-03
6	GO:0005871: kinesin complex	1.90E-03
7	GO:0000795: synaptonemal complex	2.21E-03
8	GO:0000793: condensed chromosome	2.72E-03
9	GO:0000815: ESCRT III complex	3.27E-03
10	GO:0000794: condensed nuclear chromosome	3.86E-03
11	GO:0010494: cytoplasmic stress granule	5.81E-03
12	GO:0031225: anchored component of membrane	6.68E-03
13	GO:0016459: myosin complex	7.26E-03
14	GO:0005884: actin filament	8.04E-03
15	GO:0005874: microtubule	1.18E-02
16	GO:0015629: actin cytoskeleton	1.72E-02
17	GO:0000785: chromatin	2.63E-02
18	GO:0005886: plasma membrane	2.99E-02
19	GO:0005667: transcription factor complex	3.52E-02