Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G52565

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010324: membrane invagination0.00E+00
2GO:0010055: atrichoblast differentiation0.00E+00
3GO:1902001: fatty acid transmembrane transport0.00E+00
4GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
5GO:1900067: regulation of cellular response to alkaline pH0.00E+00
6GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
7GO:0015690: aluminum cation transport0.00E+00
8GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
9GO:0042391: regulation of membrane potential1.05E-05
10GO:0006979: response to oxidative stress1.22E-05
11GO:0009643: photosynthetic acclimation1.10E-04
12GO:0071456: cellular response to hypoxia1.29E-04
13GO:0009625: response to insect1.47E-04
14GO:0009636: response to toxic substance2.03E-04
15GO:1990542: mitochondrial transmembrane transport2.65E-04
16GO:0032107: regulation of response to nutrient levels2.65E-04
17GO:1902600: hydrogen ion transmembrane transport2.65E-04
18GO:0048508: embryonic meristem development2.65E-04
19GO:0015760: glucose-6-phosphate transport2.65E-04
20GO:0046256: 2,4,6-trinitrotoluene catabolic process2.65E-04
21GO:0019567: arabinose biosynthetic process2.65E-04
22GO:0080173: male-female gamete recognition during double fertilization2.65E-04
23GO:0033306: phytol metabolic process2.65E-04
24GO:0009700: indole phytoalexin biosynthetic process2.65E-04
25GO:0010120: camalexin biosynthetic process3.10E-04
26GO:0010112: regulation of systemic acquired resistance3.74E-04
27GO:0006952: defense response4.27E-04
28GO:0050832: defense response to fungus5.17E-04
29GO:0010271: regulation of chlorophyll catabolic process5.83E-04
30GO:0071668: plant-type cell wall assembly5.83E-04
31GO:0015914: phospholipid transport5.83E-04
32GO:0006123: mitochondrial electron transport, cytochrome c to oxygen5.83E-04
33GO:0009838: abscission5.83E-04
34GO:0080181: lateral root branching5.83E-04
35GO:0055088: lipid homeostasis5.83E-04
36GO:0019521: D-gluconate metabolic process5.83E-04
37GO:0015908: fatty acid transport5.83E-04
38GO:0044419: interspecies interaction between organisms5.83E-04
39GO:0009945: radial axis specification5.83E-04
40GO:0015712: hexose phosphate transport5.83E-04
41GO:0051258: protein polymerization5.83E-04
42GO:0010115: regulation of abscisic acid biosynthetic process5.83E-04
43GO:0009407: toxin catabolic process7.90E-04
44GO:0009611: response to wounding9.38E-04
45GO:0009867: jasmonic acid mediated signaling pathway9.38E-04
46GO:0035436: triose phosphate transmembrane transport9.47E-04
47GO:0015695: organic cation transport9.47E-04
48GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway9.47E-04
49GO:0015714: phosphoenolpyruvate transport9.47E-04
50GO:1900055: regulation of leaf senescence9.47E-04
51GO:0006954: inflammatory response9.47E-04
52GO:0042742: defense response to bacterium1.07E-03
53GO:0010150: leaf senescence1.11E-03
54GO:2000377: regulation of reactive oxygen species metabolic process1.20E-03
55GO:0006468: protein phosphorylation1.22E-03
56GO:0051707: response to other organism1.28E-03
57GO:0051289: protein homotetramerization1.35E-03
58GO:0006020: inositol metabolic process1.35E-03
59GO:0015696: ammonium transport1.35E-03
60GO:0031347: regulation of defense response1.63E-03
61GO:0006012: galactose metabolic process1.72E-03
62GO:1901141: regulation of lignin biosynthetic process1.81E-03
63GO:0010109: regulation of photosynthesis1.81E-03
64GO:0045227: capsule polysaccharide biosynthetic process1.81E-03
65GO:0048638: regulation of developmental growth1.81E-03
66GO:0072488: ammonium transmembrane transport1.81E-03
67GO:0033358: UDP-L-arabinose biosynthetic process1.81E-03
68GO:0015713: phosphoglycerate transport1.81E-03
69GO:0016094: polyprenol biosynthetic process2.31E-03
70GO:0034052: positive regulation of plant-type hypersensitive response2.31E-03
71GO:0009164: nucleoside catabolic process2.31E-03
72GO:0009646: response to absence of light2.53E-03
73GO:0009117: nucleotide metabolic process2.85E-03
74GO:0009759: indole glucosinolate biosynthetic process2.85E-03
75GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.85E-03
76GO:0080167: response to karrikin2.98E-03
77GO:0010200: response to chitin3.14E-03
78GO:0009942: longitudinal axis specification3.43E-03
79GO:0009094: L-phenylalanine biosynthetic process3.43E-03
80GO:0042372: phylloquinone biosynthetic process3.43E-03
81GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.04E-03
82GO:0043090: amino acid import4.04E-03
83GO:0071446: cellular response to salicylic acid stimulus4.04E-03
84GO:1900056: negative regulation of leaf senescence4.04E-03
85GO:0050829: defense response to Gram-negative bacterium4.04E-03
86GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c4.04E-03
87GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.04E-03
88GO:0043068: positive regulation of programmed cell death4.69E-03
89GO:0009819: drought recovery4.69E-03
90GO:0030091: protein repair4.69E-03
91GO:0006997: nucleus organization5.37E-03
92GO:0010204: defense response signaling pathway, resistance gene-independent5.37E-03
93GO:2000031: regulation of salicylic acid mediated signaling pathway5.37E-03
94GO:0010208: pollen wall assembly5.37E-03
95GO:0009753: response to jasmonic acid6.00E-03
96GO:0006098: pentose-phosphate shunt6.09E-03
97GO:0019432: triglyceride biosynthetic process6.09E-03
98GO:0046916: cellular transition metal ion homeostasis6.09E-03
99GO:0048527: lateral root development6.32E-03
100GO:0010380: regulation of chlorophyll biosynthetic process6.83E-03
101GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.83E-03
102GO:0007166: cell surface receptor signaling pathway6.97E-03
103GO:0009617: response to bacterium7.36E-03
104GO:0009870: defense response signaling pathway, resistance gene-dependent7.61E-03
105GO:0006032: chitin catabolic process7.61E-03
106GO:1903507: negative regulation of nucleic acid-templated transcription8.42E-03
107GO:0048229: gametophyte development8.42E-03
108GO:0009684: indoleacetic acid biosynthetic process8.42E-03
109GO:0072593: reactive oxygen species metabolic process8.42E-03
110GO:0012501: programmed cell death9.26E-03
111GO:0009414: response to water deprivation1.14E-02
112GO:0009225: nucleotide-sugar metabolic process1.20E-02
113GO:0046688: response to copper ion1.20E-02
114GO:0000162: tryptophan biosynthetic process1.29E-02
115GO:0080147: root hair cell development1.39E-02
116GO:0006825: copper ion transport1.49E-02
117GO:0009626: plant-type hypersensitive response1.52E-02
118GO:0009737: response to abscisic acid1.58E-02
119GO:0016998: cell wall macromolecule catabolic process1.59E-02
120GO:0015979: photosynthesis1.60E-02
121GO:2000022: regulation of jasmonic acid mediated signaling pathway1.70E-02
122GO:0009624: response to nematode1.72E-02
123GO:0070417: cellular response to cold2.03E-02
124GO:0016310: phosphorylation2.06E-02
125GO:0000271: polysaccharide biosynthetic process2.15E-02
126GO:0000413: protein peptidyl-prolyl isomerization2.15E-02
127GO:0042631: cellular response to water deprivation2.15E-02
128GO:0009751: response to salicylic acid2.17E-02
129GO:0048868: pollen tube development2.26E-02
130GO:0045489: pectin biosynthetic process2.26E-02
131GO:0006520: cellular amino acid metabolic process2.26E-02
132GO:0009749: response to glucose2.51E-02
133GO:0009790: embryo development2.52E-02
134GO:0010193: response to ozone2.63E-02
135GO:0000302: response to reactive oxygen species2.63E-02
136GO:0019761: glucosinolate biosynthetic process2.76E-02
137GO:0071805: potassium ion transmembrane transport3.15E-02
138GO:0006904: vesicle docking involved in exocytosis3.15E-02
139GO:0009627: systemic acquired resistance3.70E-02
140GO:0006950: response to stress3.84E-02
141GO:0009832: plant-type cell wall biogenesis4.28E-02
142GO:0010311: lateral root formation4.28E-02
143GO:0007568: aging4.58E-02
144GO:0009910: negative regulation of flower development4.58E-02
145GO:0009631: cold acclimation4.58E-02
146GO:0006865: amino acid transport4.73E-02
147GO:0016051: carbohydrate biosynthetic process4.88E-02
148GO:0009853: photorespiration4.88E-02
RankGO TermAdjusted P value
1GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
2GO:0030552: cAMP binding1.63E-06
3GO:0030553: cGMP binding1.63E-06
4GO:0005216: ion channel activity3.36E-06
5GO:0005249: voltage-gated potassium channel activity1.05E-05
6GO:0030551: cyclic nucleotide binding1.05E-05
7GO:0016301: kinase activity2.76E-05
8GO:0003978: UDP-glucose 4-epimerase activity1.51E-04
9GO:0043295: glutathione binding1.99E-04
10GO:0019707: protein-cysteine S-acyltransferase activity2.65E-04
11GO:0047940: glucuronokinase activity2.65E-04
12GO:2001147: camalexin binding2.65E-04
13GO:0015245: fatty acid transporter activity2.65E-04
14GO:2001227: quercitrin binding2.65E-04
15GO:0004385: guanylate kinase activity5.83E-04
16GO:0047364: desulfoglucosinolate sulfotransferase activity5.83E-04
17GO:0015152: glucose-6-phosphate transmembrane transporter activity5.83E-04
18GO:0032403: protein complex binding9.47E-04
19GO:0071917: triose-phosphate transmembrane transporter activity9.47E-04
20GO:0004324: ferredoxin-NADP+ reductase activity9.47E-04
21GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity9.47E-04
22GO:0016531: copper chaperone activity9.47E-04
23GO:0004364: glutathione transferase activity1.22E-03
24GO:0022890: inorganic cation transmembrane transporter activity1.35E-03
25GO:0017077: oxidative phosphorylation uncoupler activity1.35E-03
26GO:0015120: phosphoglycerate transmembrane transporter activity1.81E-03
27GO:0050373: UDP-arabinose 4-epimerase activity1.81E-03
28GO:0047769: arogenate dehydratase activity1.81E-03
29GO:0004834: tryptophan synthase activity1.81E-03
30GO:0004737: pyruvate decarboxylase activity1.81E-03
31GO:0004664: prephenate dehydratase activity1.81E-03
32GO:0004499: N,N-dimethylaniline monooxygenase activity1.87E-03
33GO:0004674: protein serine/threonine kinase activity2.10E-03
34GO:0005496: steroid binding2.31E-03
35GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.31E-03
36GO:0016773: phosphotransferase activity, alcohol group as acceptor2.31E-03
37GO:0002094: polyprenyltransferase activity2.31E-03
38GO:0019901: protein kinase binding2.71E-03
39GO:0008519: ammonium transmembrane transporter activity2.85E-03
40GO:0030976: thiamine pyrophosphate binding2.85E-03
41GO:0004497: monooxygenase activity2.98E-03
42GO:0004144: diacylglycerol O-acyltransferase activity3.43E-03
43GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.43E-03
44GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.43E-03
45GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides3.43E-03
46GO:0003950: NAD+ ADP-ribosyltransferase activity3.43E-03
47GO:0005261: cation channel activity3.43E-03
48GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.43E-03
49GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.73E-03
50GO:0016831: carboxy-lyase activity4.04E-03
51GO:0004714: transmembrane receptor protein tyrosine kinase activity4.69E-03
52GO:0004033: aldo-keto reductase (NADP) activity4.69E-03
53GO:0043565: sequence-specific DNA binding5.97E-03
54GO:0071949: FAD binding6.09E-03
55GO:0005524: ATP binding6.09E-03
56GO:0047617: acyl-CoA hydrolase activity6.83E-03
57GO:0005516: calmodulin binding7.06E-03
58GO:0004568: chitinase activity7.61E-03
59GO:0008171: O-methyltransferase activity7.61E-03
60GO:0050661: NADP binding7.90E-03
61GO:0008559: xenobiotic-transporting ATPase activity8.42E-03
62GO:0015386: potassium:proton antiporter activity8.42E-03
63GO:0005315: inorganic phosphate transmembrane transporter activity1.01E-02
64GO:0008266: poly(U) RNA binding1.10E-02
65GO:0008146: sulfotransferase activity1.20E-02
66GO:0016298: lipase activity1.25E-02
67GO:0003954: NADH dehydrogenase activity1.39E-02
68GO:0001046: core promoter sequence-specific DNA binding1.39E-02
69GO:0003714: transcription corepressor activity1.39E-02
70GO:0015079: potassium ion transmembrane transporter activity1.49E-02
71GO:0019706: protein-cysteine S-palmitoyltransferase activity1.59E-02
72GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.70E-02
73GO:0005507: copper ion binding2.18E-02
74GO:0005199: structural constituent of cell wall2.26E-02
75GO:0015299: solute:proton antiporter activity2.38E-02
76GO:0004197: cysteine-type endopeptidase activity2.76E-02
77GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.78E-02
78GO:0015297: antiporter activity2.85E-02
79GO:0016791: phosphatase activity3.02E-02
80GO:0008483: transaminase activity3.15E-02
81GO:0005509: calcium ion binding3.26E-02
82GO:0016597: amino acid binding3.28E-02
83GO:0008375: acetylglucosaminyltransferase activity3.70E-02
84GO:0004806: triglyceride lipase activity3.84E-02
85GO:0030247: polysaccharide binding3.84E-02
86GO:0004721: phosphoprotein phosphatase activity3.84E-02
87GO:0015238: drug transmembrane transporter activity4.28E-02
88GO:0046982: protein heterodimerization activity4.51E-02
89GO:0030145: manganese ion binding4.58E-02
90GO:0050897: cobalt ion binding4.58E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0016021: integral component of membrane9.01E-07
3GO:0005886: plasma membrane1.57E-05
4GO:0000138: Golgi trans cisterna2.65E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane5.83E-04
6GO:0005901: caveola5.83E-04
7GO:0009530: primary cell wall9.47E-04
8GO:0005758: mitochondrial intermembrane space1.20E-03
9GO:0070062: extracellular exosome1.35E-03
10GO:0005887: integral component of plasma membrane2.16E-03
11GO:0000813: ESCRT I complex2.31E-03
12GO:0016363: nuclear matrix3.43E-03
13GO:0005794: Golgi apparatus3.50E-03
14GO:0005777: peroxisome4.40E-03
15GO:0005802: trans-Golgi network7.88E-03
16GO:0005769: early endosome1.29E-02
17GO:0070469: respiratory chain1.49E-02
18GO:0009504: cell plate2.51E-02
19GO:0031965: nuclear membrane2.51E-02
20GO:0000145: exocyst2.76E-02
21GO:0009506: plasmodesma2.89E-02
22GO:0032580: Golgi cisterna membrane3.02E-02
23GO:0005768: endosome3.14E-02
24GO:0005774: vacuolar membrane3.90E-02
25GO:0000325: plant-type vacuole4.58E-02
26GO:0000786: nucleosome4.73E-02
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Gene type



Gene DE type