co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G51400

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0005996: monosaccharide metabolic process	0.00E+00
3	GO:0090391: granum assembly	2.61E-07
4	GO:0071277: cellular response to calcium ion	3.12E-05
5	GO:0046467: membrane lipid biosynthetic process	3.12E-05
6	GO:0015671: oxygen transport	3.12E-05
7	GO:0080093: regulation of photorespiration	3.12E-05
8	GO:0031998: regulation of fatty acid beta-oxidation	3.12E-05
9	GO:0006094: gluconeogenesis	3.71E-05
10	GO:0010207: photosystem II assembly	4.29E-05
11	GO:0006096: glycolytic process	4.93E-05
12	GO:0042631: cellular response to water deprivation	1.27E-04
13	GO:0006081: cellular aldehyde metabolic process	1.37E-04
14	GO:0045727: positive regulation of translation	2.76E-04
15	GO:0015995: chlorophyll biosynthetic process	3.00E-04
16	GO:0006097: glyoxylate cycle	3.53E-04
17	GO:0042549: photosystem II stabilization	4.34E-04
18	GO:0010190: cytochrome b6f complex assembly	4.34E-04
19	GO:0034599: cellular response to oxidative stress	4.39E-04
20	GO:0006869: lipid transport	4.99E-04
21	GO:0010189: vitamin E biosynthetic process	5.20E-04
22	GO:0009854: oxidative photosynthetic carbon pathway	5.20E-04
23	GO:0010196: nonphotochemical quenching	6.07E-04
24	GO:0009642: response to light intensity	6.99E-04
25	GO:0009704: de-etiolation	6.99E-04
26	GO:0071482: cellular response to light stimulus	7.94E-04
27	GO:0032544: plastid translation	7.94E-04
28	GO:0006098: pentose-phosphate shunt	8.92E-04
29	GO:0019432: triglyceride biosynthetic process	8.92E-04
30	GO:0090333: regulation of stomatal closure	8.92E-04
31	GO:0006783: heme biosynthetic process	8.92E-04
32	GO:0042545: cell wall modification	9.73E-04
33	GO:0006779: porphyrin-containing compound biosynthetic process	9.92E-04
34	GO:0006782: protoporphyrinogen IX biosynthetic process	1.10E-03
35	GO:0009416: response to light stimulus	1.17E-03
36	GO:0043085: positive regulation of catalytic activity	1.20E-03
37	GO:0000272: polysaccharide catabolic process	1.20E-03
38	GO:0018119: peptidyl-cysteine S-nitrosylation	1.20E-03
39	GO:0006108: malate metabolic process	1.43E-03
40	GO:0006006: glucose metabolic process	1.43E-03
41	GO:0010143: cutin biosynthetic process	1.55E-03
42	GO:0019253: reductive pentose-phosphate cycle	1.55E-03
43	GO:0045490: pectin catabolic process	1.69E-03
44	GO:0010025: wax biosynthetic process	1.79E-03
45	GO:0009768: photosynthesis, light harvesting in photosystem I	2.05E-03
46	GO:0016117: carotenoid biosynthetic process	2.75E-03
47	GO:0010118: stomatal movement	2.90E-03
48	GO:0055114: oxidation-reduction process	2.90E-03
49	GO:0006662: glycerol ether metabolic process	3.05E-03
50	GO:0015979: photosynthesis	3.65E-03
51	GO:0010027: thylakoid membrane organization	4.52E-03
52	GO:0005975: carbohydrate metabolic process	4.81E-03
53	GO:0042128: nitrate assimilation	4.87E-03
54	GO:0009753: response to jasmonic acid	5.04E-03
55	GO:0018298: protein-chromophore linkage	5.42E-03
56	GO:0010218: response to far red light	5.79E-03
57	GO:0009853: photorespiration	6.38E-03
58	GO:0009637: response to blue light	6.38E-03
59	GO:0006099: tricarboxylic acid cycle	6.58E-03
60	GO:0006631: fatty acid metabolic process	7.19E-03
61	GO:0009737: response to abscisic acid	7.39E-03
62	GO:0010114: response to red light	7.60E-03
63	GO:0009735: response to cytokinin	7.61E-03
64	GO:0006364: rRNA processing	9.36E-03
65	GO:0042742: defense response to bacterium	1.69E-02
66	GO:0007623: circadian rhythm	1.77E-02
67	GO:0010150: leaf senescence	1.77E-02
68	GO:0010468: regulation of gene expression	2.00E-02
69	GO:0009409: response to cold	2.29E-02
70	GO:0009658: chloroplast organization	2.41E-02
71	GO:0080167: response to karrikin	2.81E-02
72	GO:0045454: cell redox homeostasis	3.19E-02
73	GO:0016042: lipid catabolic process	3.63E-02
74	GO:0009751: response to salicylic acid	3.67E-02
75	GO:0006357: regulation of transcription from RNA polymerase II promoter	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0009974: zeinoxanthin epsilon hydroxylase activity	0.00E+00
2	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
3	GO:0045550: geranylgeranyl reductase activity	0.00E+00
4	GO:0008465: glycerate dehydrogenase activity	0.00E+00
5	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
6	GO:0004332: fructose-bisphosphate aldolase activity	3.30E-06
7	GO:0005344: oxygen transporter activity	3.12E-05
8	GO:0004565: beta-galactosidase activity	3.71E-05
9	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	7.88E-05
10	GO:0008883: glutamyl-tRNA reductase activity	7.88E-05
11	GO:0010297: heteropolysaccharide binding	7.88E-05
12	GO:0050734: hydroxycinnamoyltransferase activity	1.37E-04
13	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	1.37E-04
14	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.37E-04
15	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.04E-04
16	GO:0052793: pectin acetylesterase activity	2.76E-04
17	GO:0004029: aldehyde dehydrogenase (NAD) activity	4.34E-04
18	GO:0016615: malate dehydrogenase activity	4.34E-04
19	GO:0050661: NADP binding	4.78E-04
20	GO:0030060: L-malate dehydrogenase activity	5.20E-04
21	GO:0051287: NAD binding	6.46E-04
22	GO:0045330: aspartyl esterase activity	7.90E-04
23	GO:0030599: pectinesterase activity	9.46E-04
24	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	9.92E-04
25	GO:0008047: enzyme activator activity	1.10E-03
26	GO:0030234: enzyme regulator activity	1.10E-03
27	GO:0008266: poly(U) RNA binding	1.55E-03
28	GO:0031409: pigment binding	1.79E-03
29	GO:0047134: protein-disulfide reductase activity	2.75E-03
30	GO:0004791: thioredoxin-disulfide reductase activity	3.20E-03
31	GO:0016853: isomerase activity	3.20E-03
32	GO:0050662: coenzyme binding	3.20E-03
33	GO:0052689: carboxylic ester hydrolase activity	3.53E-03
34	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.84E-03
35	GO:0016168: chlorophyll binding	4.69E-03
36	GO:0008289: lipid binding	6.53E-03
37	GO:0051537: 2 iron, 2 sulfur cluster binding	8.03E-03
38	GO:0030246: carbohydrate binding	1.12E-02
39	GO:0019825: oxygen binding	1.19E-02
40	GO:0015035: protein disulfide oxidoreductase activity	1.22E-02
41	GO:0019843: rRNA binding	1.41E-02
42	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.09E-02
43	GO:0016788: hydrolase activity, acting on ester bonds	2.44E-02
44	GO:0043531: ADP binding	2.57E-02
45	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.19E-02
46	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.45E-02
47	GO:0016787: hydrolase activity	3.63E-02

Rank	GO Term	Adjusted P value
1	GO:0042579: microbody	0.00E+00
2	GO:0009507: chloroplast	9.07E-11
3	GO:0009941: chloroplast envelope	9.13E-10
4	GO:0048046: apoplast	1.22E-06
5	GO:0010287: plastoglobule	2.82E-06
6	GO:0009535: chloroplast thylakoid membrane	3.07E-06
7	GO:0009515: granal stacked thylakoid	3.12E-05
8	GO:0000427: plastid-encoded plastid RNA polymerase complex	7.88E-05
9	GO:0009570: chloroplast stroma	8.03E-05
10	GO:0009534: chloroplast thylakoid	2.00E-04
11	GO:0010319: stromule	2.25E-04
12	GO:0009505: plant-type cell wall	6.46E-04
13	GO:0005777: peroxisome	1.39E-03
14	GO:0009579: thylakoid	1.46E-03
15	GO:0030076: light-harvesting complex	1.67E-03
16	GO:0043234: protein complex	1.79E-03
17	GO:0031969: chloroplast membrane	3.20E-03
18	GO:0009522: photosystem I	3.20E-03
19	GO:0009523: photosystem II	3.36E-03
20	GO:0005618: cell wall	3.65E-03
21	GO:0005773: vacuole	5.69E-03
22	GO:0016020: membrane	9.61E-03
23	GO:0009543: chloroplast thylakoid lumen	1.41E-02
24	GO:0005623: cell	1.43E-02
25	GO:0005576: extracellular region	1.48E-02