Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G50740

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:1902001: fatty acid transmembrane transport0.00E+00
3GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
4GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
5GO:0018063: cytochrome c-heme linkage0.00E+00
6GO:0010793: regulation of mRNA export from nucleus0.00E+00
7GO:0042742: defense response to bacterium4.88E-05
8GO:0009407: toxin catabolic process6.88E-05
9GO:0009759: indole glucosinolate biosynthetic process9.94E-05
10GO:0051707: response to other organism1.41E-04
11GO:0009636: response to toxic substance1.73E-04
12GO:1900056: negative regulation of leaf senescence1.80E-04
13GO:1900057: positive regulation of leaf senescence1.80E-04
14GO:1990542: mitochondrial transmembrane transport2.48E-04
15GO:0032107: regulation of response to nutrient levels2.48E-04
16GO:0033306: phytol metabolic process2.48E-04
17GO:0009700: indole phytoalexin biosynthetic process2.48E-04
18GO:0010230: alternative respiration2.48E-04
19GO:0010482: regulation of epidermal cell division2.48E-04
20GO:0034214: protein hexamerization2.48E-04
21GO:1900384: regulation of flavonol biosynthetic process2.48E-04
22GO:0010120: camalexin biosynthetic process2.82E-04
23GO:0010112: regulation of systemic acquired resistance3.41E-04
24GO:0051607: defense response to virus4.10E-04
25GO:0015031: protein transport4.33E-04
26GO:0071668: plant-type cell wall assembly5.49E-04
27GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.49E-04
28GO:0080181: lateral root branching5.49E-04
29GO:0055088: lipid homeostasis5.49E-04
30GO:0050684: regulation of mRNA processing5.49E-04
31GO:0019374: galactolipid metabolic process5.49E-04
32GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex5.49E-04
33GO:0015908: fatty acid transport5.49E-04
34GO:0000719: photoreactive repair5.49E-04
35GO:0051258: protein polymerization5.49E-04
36GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine5.49E-04
37GO:0019725: cellular homeostasis5.49E-04
38GO:0010311: lateral root formation6.60E-04
39GO:0010186: positive regulation of cellular defense response8.92E-04
40GO:0010366: negative regulation of ethylene biosynthetic process8.92E-04
41GO:0015695: organic cation transport8.92E-04
42GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process8.92E-04
43GO:0002230: positive regulation of defense response to virus by host8.92E-04
44GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway8.92E-04
45GO:0006048: UDP-N-acetylglucosamine biosynthetic process8.92E-04
46GO:0032784: regulation of DNA-templated transcription, elongation8.92E-04
47GO:0040008: regulation of growth8.97E-04
48GO:0050832: defense response to fungus1.16E-03
49GO:0009617: response to bacterium1.25E-03
50GO:0080024: indolebutyric acid metabolic process1.27E-03
51GO:0010116: positive regulation of abscisic acid biosynthetic process1.27E-03
52GO:0006020: inositol metabolic process1.27E-03
53GO:0070301: cellular response to hydrogen peroxide1.27E-03
54GO:0015696: ammonium transport1.27E-03
55GO:0051289: protein homotetramerization1.27E-03
56GO:1902290: positive regulation of defense response to oomycetes1.27E-03
57GO:0016998: cell wall macromolecule catabolic process1.32E-03
58GO:0006012: galactose metabolic process1.57E-03
59GO:0060548: negative regulation of cell death1.70E-03
60GO:0048830: adventitious root development1.70E-03
61GO:0072488: ammonium transmembrane transport1.70E-03
62GO:0051567: histone H3-K9 methylation1.70E-03
63GO:1901002: positive regulation of response to salt stress1.70E-03
64GO:0015867: ATP transport1.70E-03
65GO:0042391: regulation of membrane potential1.99E-03
66GO:0031365: N-terminal protein amino acid modification2.17E-03
67GO:0046283: anthocyanin-containing compound metabolic process2.17E-03
68GO:0009643: photosynthetic acclimation2.67E-03
69GO:0015866: ADP transport2.67E-03
70GO:0006777: Mo-molybdopterin cofactor biosynthetic process2.67E-03
71GO:0010256: endomembrane system organization2.67E-03
72GO:0009611: response to wounding3.04E-03
73GO:0006979: response to oxidative stress3.04E-03
74GO:0042372: phylloquinone biosynthetic process3.21E-03
75GO:1902074: response to salt3.79E-03
76GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.79E-03
77GO:0080186: developmental vegetative growth3.79E-03
78GO:0000122: negative regulation of transcription from RNA polymerase II promoter3.79E-03
79GO:0009627: systemic acquired resistance4.26E-03
80GO:0016559: peroxisome fission4.39E-03
81GO:0006644: phospholipid metabolic process4.39E-03
82GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.39E-03
83GO:0030091: protein repair4.39E-03
84GO:0043068: positive regulation of programmed cell death4.39E-03
85GO:0006605: protein targeting4.39E-03
86GO:0009751: response to salicylic acid4.57E-03
87GO:0017004: cytochrome complex assembly5.03E-03
88GO:0010208: pollen wall assembly5.03E-03
89GO:0006997: nucleus organization5.03E-03
90GO:0010204: defense response signaling pathway, resistance gene-independent5.03E-03
91GO:0009753: response to jasmonic acid5.19E-03
92GO:0010150: leaf senescence5.21E-03
93GO:0009835: fruit ripening5.70E-03
94GO:0007338: single fertilization5.70E-03
95GO:0019432: triglyceride biosynthetic process5.70E-03
96GO:0006952: defense response5.74E-03
97GO:0010043: response to zinc ion5.75E-03
98GO:0048527: lateral root development5.75E-03
99GO:0008202: steroid metabolic process6.40E-03
100GO:1900426: positive regulation of defense response to bacterium6.40E-03
101GO:0009638: phototropism6.40E-03
102GO:0090332: stomatal closure6.40E-03
103GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.40E-03
104GO:0009688: abscisic acid biosynthetic process7.12E-03
105GO:0009641: shade avoidance7.12E-03
106GO:0019538: protein metabolic process7.12E-03
107GO:0009870: defense response signaling pathway, resistance gene-dependent7.12E-03
108GO:0006032: chitin catabolic process7.12E-03
109GO:0048765: root hair cell differentiation7.88E-03
110GO:0009684: indoleacetic acid biosynthetic process7.88E-03
111GO:0009682: induced systemic resistance7.88E-03
112GO:0052544: defense response by callose deposition in cell wall7.88E-03
113GO:0006890: retrograde vesicle-mediated transport, Golgi to ER8.66E-03
114GO:0000266: mitochondrial fission8.66E-03
115GO:0045037: protein import into chloroplast stroma8.66E-03
116GO:2000028: regulation of photoperiodism, flowering9.47E-03
117GO:0009785: blue light signaling pathway9.47E-03
118GO:0006970: response to osmotic stress9.99E-03
119GO:0090351: seedling development1.12E-02
120GO:0009225: nucleotide-sugar metabolic process1.12E-02
121GO:0000162: tryptophan biosynthetic process1.21E-02
122GO:0010200: response to chitin1.25E-02
123GO:0080147: root hair cell development1.30E-02
124GO:0009737: response to abscisic acid1.31E-02
125GO:0051302: regulation of cell division1.39E-02
126GO:0006874: cellular calcium ion homeostasis1.39E-02
127GO:0010026: trichome differentiation1.39E-02
128GO:0043622: cortical microtubule organization1.39E-02
129GO:0009269: response to desiccation1.49E-02
130GO:0006886: intracellular protein transport1.56E-02
131GO:0007005: mitochondrion organization1.59E-02
132GO:0071456: cellular response to hypoxia1.59E-02
133GO:0009625: response to insect1.69E-02
134GO:0009693: ethylene biosynthetic process1.69E-02
135GO:0009411: response to UV1.69E-02
136GO:0042147: retrograde transport, endosome to Golgi1.90E-02
137GO:0006629: lipid metabolic process1.96E-02
138GO:0000413: protein peptidyl-prolyl isomerization2.01E-02
139GO:0010118: stomatal movement2.01E-02
140GO:0005975: carbohydrate metabolic process2.05E-02
141GO:0010182: sugar mediated signaling pathway2.12E-02
142GO:0048868: pollen tube development2.12E-02
143GO:0006520: cellular amino acid metabolic process2.12E-02
144GO:0046686: response to cadmium ion2.15E-02
145GO:0006623: protein targeting to vacuole2.34E-02
146GO:0006635: fatty acid beta-oxidation2.46E-02
147GO:0071554: cell wall organization or biogenesis2.46E-02
148GO:0000302: response to reactive oxygen species2.46E-02
149GO:0006891: intra-Golgi vesicle-mediated transport2.46E-02
150GO:0009630: gravitropism2.58E-02
151GO:0009567: double fertilization forming a zygote and endosperm2.82E-02
152GO:0009734: auxin-activated signaling pathway3.01E-02
153GO:0007166: cell surface receptor signaling pathway3.10E-02
154GO:0009615: response to virus3.19E-02
155GO:0009816: defense response to bacterium, incompatible interaction3.32E-02
156GO:0006906: vesicle fusion3.46E-02
157GO:0006974: cellular response to DNA damage stimulus3.46E-02
158GO:0009817: defense response to fungus, incompatible interaction3.86E-02
159GO:0007568: aging4.28E-02
160GO:0009631: cold acclimation4.28E-02
161GO:0009853: photorespiration4.56E-02
162GO:0006099: tricarboxylic acid cycle4.71E-02
163GO:0045893: positive regulation of transcription, DNA-templated4.73E-02
RankGO TermAdjusted P value
1GO:2001227: quercitrin binding0.00E+00
2GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
3GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
4GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
5GO:2001147: camalexin binding0.00E+00
6GO:0004364: glutathione transferase activity1.31E-04
7GO:0008320: protein transmembrane transporter activity1.80E-04
8GO:0043295: glutathione binding1.80E-04
9GO:0015245: fatty acid transporter activity2.48E-04
10GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.48E-04
11GO:0004649: poly(ADP-ribose) glycohydrolase activity2.48E-04
12GO:0090353: polygalacturonase inhibitor activity2.48E-04
13GO:0047940: glucuronokinase activity2.48E-04
14GO:0009000: selenocysteine lyase activity2.48E-04
15GO:0047617: acyl-CoA hydrolase activity4.05E-04
16GO:0004806: triglyceride lipase activity5.44E-04
17GO:0032934: sterol binding5.49E-04
18GO:0050736: O-malonyltransferase activity5.49E-04
19GO:0030552: cAMP binding8.92E-04
20GO:0008265: Mo-molybdopterin cofactor sulfurase activity8.92E-04
21GO:0030553: cGMP binding8.92E-04
22GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity8.92E-04
23GO:0043169: cation binding8.92E-04
24GO:0032403: protein complex binding8.92E-04
25GO:0005216: ion channel activity1.20E-03
26GO:0017077: oxidative phosphorylation uncoupler activity1.27E-03
27GO:0035529: NADH pyrophosphatase activity1.27E-03
28GO:0016656: monodehydroascorbate reductase (NADH) activity1.27E-03
29GO:0009916: alternative oxidase activity1.70E-03
30GO:0050378: UDP-glucuronate 4-epimerase activity1.70E-03
31GO:0005249: voltage-gated potassium channel activity1.99E-03
32GO:0030551: cyclic nucleotide binding1.99E-03
33GO:0047631: ADP-ribose diphosphatase activity2.17E-03
34GO:0030151: molybdenum ion binding2.17E-03
35GO:0016773: phosphotransferase activity, alcohol group as acceptor2.17E-03
36GO:0018685: alkane 1-monooxygenase activity2.17E-03
37GO:0005496: steroid binding2.17E-03
38GO:0008519: ammonium transmembrane transporter activity2.67E-03
39GO:0000210: NAD+ diphosphatase activity2.67E-03
40GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.21E-03
41GO:0015217: ADP transmembrane transporter activity3.21E-03
42GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.21E-03
43GO:0102391: decanoate--CoA ligase activity3.21E-03
44GO:0003978: UDP-glucose 4-epimerase activity3.21E-03
45GO:0004144: diacylglycerol O-acyltransferase activity3.21E-03
46GO:0005347: ATP transmembrane transporter activity3.21E-03
47GO:0004656: procollagen-proline 4-dioxygenase activity3.21E-03
48GO:0004620: phospholipase activity3.79E-03
49GO:0004467: long-chain fatty acid-CoA ligase activity3.79E-03
50GO:0008235: metalloexopeptidase activity3.79E-03
51GO:0030170: pyridoxal phosphate binding3.95E-03
52GO:0004714: transmembrane receptor protein tyrosine kinase activity4.39E-03
53GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity4.39E-03
54GO:0004034: aldose 1-epimerase activity4.39E-03
55GO:0005544: calcium-dependent phospholipid binding4.39E-03
56GO:0004033: aldo-keto reductase (NADP) activity4.39E-03
57GO:0030247: polysaccharide binding4.49E-03
58GO:0008142: oxysterol binding5.03E-03
59GO:0004568: chitinase activity7.12E-03
60GO:0004177: aminopeptidase activity7.88E-03
61GO:0005509: calcium ion binding8.71E-03
62GO:0005198: structural molecule activity9.14E-03
63GO:0008266: poly(U) RNA binding1.03E-02
64GO:0003712: transcription cofactor activity1.12E-02
65GO:0005217: intracellular ligand-gated ion channel activity1.12E-02
66GO:0004970: ionotropic glutamate receptor activity1.12E-02
67GO:0001046: core promoter sequence-specific DNA binding1.30E-02
68GO:0016787: hydrolase activity1.33E-02
69GO:0004871: signal transducer activity1.59E-02
70GO:0016746: transferase activity, transferring acyl groups1.61E-02
71GO:0004499: N,N-dimethylaniline monooxygenase activity1.79E-02
72GO:0005199: structural constituent of cell wall2.12E-02
73GO:0016853: isomerase activity2.23E-02
74GO:0050662: coenzyme binding2.23E-02
75GO:0004197: cysteine-type endopeptidase activity2.58E-02
76GO:0004674: protein serine/threonine kinase activity2.66E-02
77GO:0008483: transaminase activity2.94E-02
78GO:0016413: O-acetyltransferase activity3.07E-02
79GO:0016301: kinase activity4.08E-02
80GO:0004222: metalloendopeptidase activity4.14E-02
81GO:0050897: cobalt ion binding4.28E-02
82GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.56E-02
83GO:0050660: flavin adenine dinucleotide binding4.83E-02
84GO:0000149: SNARE binding4.86E-02
85GO:0004712: protein serine/threonine/tyrosine kinase activity4.86E-02
RankGO TermAdjusted P value
1GO:0005794: Golgi apparatus6.25E-06
2GO:0016021: integral component of membrane3.67E-05
3GO:0045252: oxoglutarate dehydrogenase complex2.48E-04
4GO:0005802: trans-Golgi network5.18E-04
5GO:0005789: endoplasmic reticulum membrane6.81E-04
6GO:0009530: primary cell wall8.92E-04
7GO:0030658: transport vesicle membrane1.27E-03
8GO:0005886: plasma membrane1.34E-03
9GO:0005783: endoplasmic reticulum1.67E-03
10GO:0000813: ESCRT I complex2.17E-03
11GO:0005768: endosome2.43E-03
12GO:0031965: nuclear membrane2.47E-03
13GO:0032580: Golgi cisterna membrane3.20E-03
14GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane3.79E-03
15GO:0005743: mitochondrial inner membrane4.18E-03
16GO:0005779: integral component of peroxisomal membrane5.03E-03
17GO:0005829: cytosol5.83E-03
18GO:0017119: Golgi transport complex7.12E-03
19GO:0005887: integral component of plasma membrane7.42E-03
20GO:0031012: extracellular matrix9.47E-03
21GO:0070469: respiratory chain1.39E-02
22GO:0005741: mitochondrial outer membrane1.49E-02
23GO:0005623: cell2.02E-02
24GO:0031225: anchored component of membrane2.17E-02
25GO:0043231: intracellular membrane-bounded organelle2.22E-02
26GO:0009506: plasmodesma2.26E-02
27GO:0019898: extrinsic component of membrane2.34E-02
28GO:0009504: cell plate2.34E-02
29GO:0016592: mediator complex2.58E-02
30GO:0009705: plant-type vacuole membrane2.71E-02
31GO:0005778: peroxisomal membrane2.94E-02
32GO:0046658: anchored component of plasma membrane3.59E-02
33GO:0005618: cell wall4.19E-02
34GO:0009505: plant-type cell wall4.41E-02
35GO:0005777: peroxisome4.73E-02
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Gene type



Gene DE type