co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G49650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
2	GO:0017038: protein import	0.00E+00
3	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
4	GO:0090279: regulation of calcium ion import	0.00E+00
5	GO:0043488: regulation of mRNA stability	0.00E+00
6	GO:0042820: vitamin B6 catabolic process	0.00E+00
7	GO:0030155: regulation of cell adhesion	0.00E+00
8	GO:0019323: pentose catabolic process	0.00E+00
9	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
10	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
11	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
12	GO:1905177: tracheary element differentiation	0.00E+00
13	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
14	GO:0008298: intracellular mRNA localization	0.00E+00
15	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
16	GO:1902326: positive regulation of chlorophyll biosynthetic process	0.00E+00
17	GO:0071474: cellular hyperosmotic response	0.00E+00
18	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
19	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
20	GO:0042821: pyridoxal biosynthetic process	0.00E+00
21	GO:0007638: mechanosensory behavior	0.00E+00
22	GO:0006399: tRNA metabolic process	0.00E+00
23	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
24	GO:0015882: L-ascorbic acid transport	0.00E+00
25	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
26	GO:0070125: mitochondrial translational elongation	0.00E+00
27	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
28	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
29	GO:0070979: protein K11-linked ubiquitination	0.00E+00
30	GO:0009658: chloroplast organization	2.70E-08
31	GO:0045038: protein import into chloroplast thylakoid membrane	9.97E-06
32	GO:1900871: chloroplast mRNA modification	2.25E-05
33	GO:0018026: peptidyl-lysine monomethylation	2.25E-05
34	GO:1901259: chloroplast rRNA processing	3.07E-05
35	GO:0005977: glycogen metabolic process	7.27E-05
36	GO:0009657: plastid organization	9.43E-05
37	GO:0010239: chloroplast mRNA processing	1.51E-04
38	GO:2001141: regulation of RNA biosynthetic process	1.51E-04
39	GO:0010021: amylopectin biosynthetic process	2.54E-04
40	GO:0009793: embryo development ending in seed dormancy	2.58E-04
41	GO:0032502: developmental process	3.44E-04
42	GO:0042793: transcription from plastid promoter	5.30E-04
43	GO:0010027: thylakoid membrane organization	5.59E-04
44	GO:0042372: phylloquinone biosynthetic process	7.00E-04
45	GO:0005991: trehalose metabolic process	7.28E-04
46	GO:0070509: calcium ion import	7.28E-04
47	GO:0006419: alanyl-tRNA aminoacylation	7.28E-04
48	GO:0031426: polycistronic mRNA processing	7.28E-04
49	GO:0044262: cellular carbohydrate metabolic process	7.28E-04
50	GO:0043266: regulation of potassium ion transport	7.28E-04
51	GO:0010063: positive regulation of trichoblast fate specification	7.28E-04
52	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	7.28E-04
53	GO:0010480: microsporocyte differentiation	7.28E-04
54	GO:0042371: vitamin K biosynthetic process	7.28E-04
55	GO:0043686: co-translational protein modification	7.28E-04
56	GO:2000021: regulation of ion homeostasis	7.28E-04
57	GO:0070574: cadmium ion transmembrane transport	7.28E-04
58	GO:0043007: maintenance of rDNA	7.28E-04
59	GO:0051247: positive regulation of protein metabolic process	7.28E-04
60	GO:1902458: positive regulation of stomatal opening	7.28E-04
61	GO:0051775: response to redox state	7.28E-04
62	GO:0010028: xanthophyll cycle	7.28E-04
63	GO:0015904: tetracycline transport	7.28E-04
64	GO:2000905: negative regulation of starch metabolic process	7.28E-04
65	GO:0000476: maturation of 4.5S rRNA	7.28E-04
66	GO:0009443: pyridoxal 5'-phosphate salvage	7.28E-04
67	GO:0000967: rRNA 5'-end processing	7.28E-04
68	GO:0009416: response to light stimulus	7.65E-04
69	GO:0009451: RNA modification	7.83E-04
70	GO:0048437: floral organ development	8.94E-04
71	GO:0009742: brassinosteroid mediated signaling pathway	1.24E-03
72	GO:0071482: cellular response to light stimulus	1.35E-03
73	GO:0051262: protein tetramerization	1.57E-03
74	GO:0034470: ncRNA processing	1.57E-03
75	GO:1901959: positive regulation of cutin biosynthetic process	1.57E-03
76	GO:0006432: phenylalanyl-tRNA aminoacylation	1.57E-03
77	GO:0000256: allantoin catabolic process	1.57E-03
78	GO:0060359: response to ammonium ion	1.57E-03
79	GO:0048255: mRNA stabilization	1.57E-03
80	GO:1904143: positive regulation of carotenoid biosynthetic process	1.57E-03
81	GO:0080009: mRNA methylation	1.57E-03
82	GO:0001682: tRNA 5'-leader removal	1.57E-03
83	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.57E-03
84	GO:0006568: tryptophan metabolic process	1.57E-03
85	GO:0010024: phytochromobilin biosynthetic process	1.57E-03
86	GO:0006662: glycerol ether metabolic process	1.59E-03
87	GO:0010182: sugar mediated signaling pathway	1.59E-03
88	GO:0048507: meristem development	1.62E-03
89	GO:1900865: chloroplast RNA modification	1.92E-03
90	GO:0048586: regulation of long-day photoperiodism, flowering	2.60E-03
91	GO:0006954: inflammatory response	2.60E-03
92	GO:0010136: ureide catabolic process	2.60E-03
93	GO:0031145: anaphase-promoting complex-dependent catabolic process	2.60E-03
94	GO:0033591: response to L-ascorbic acid	2.60E-03
95	GO:0048281: inflorescence morphogenesis	2.60E-03
96	GO:0010623: programmed cell death involved in cell development	2.60E-03
97	GO:0006696: ergosterol biosynthetic process	2.60E-03
98	GO:0006788: heme oxidation	2.60E-03
99	GO:0043157: response to cation stress	2.60E-03
100	GO:1904278: positive regulation of wax biosynthetic process	2.60E-03
101	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2.60E-03
102	GO:0006352: DNA-templated transcription, initiation	2.61E-03
103	GO:0009773: photosynthetic electron transport in photosystem I	2.61E-03
104	GO:0006415: translational termination	2.61E-03
105	GO:0019684: photosynthesis, light reaction	2.61E-03
106	GO:0009102: biotin biosynthetic process	3.78E-03
107	GO:0030071: regulation of mitotic metaphase/anaphase transition	3.78E-03
108	GO:0009226: nucleotide-sugar biosynthetic process	3.78E-03
109	GO:0009152: purine ribonucleotide biosynthetic process	3.78E-03
110	GO:0046653: tetrahydrofolate metabolic process	3.78E-03
111	GO:0046739: transport of virus in multicellular host	3.78E-03
112	GO:0006107: oxaloacetate metabolic process	3.78E-03
113	GO:0019048: modulation by virus of host morphology or physiology	3.78E-03
114	GO:0043572: plastid fission	3.78E-03
115	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.78E-03
116	GO:0006145: purine nucleobase catabolic process	3.78E-03
117	GO:0051016: barbed-end actin filament capping	3.78E-03
118	GO:0090308: regulation of methylation-dependent chromatin silencing	3.78E-03
119	GO:0031048: chromatin silencing by small RNA	3.78E-03
120	GO:0010148: transpiration	3.78E-03
121	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	3.78E-03
122	GO:0016556: mRNA modification	3.78E-03
123	GO:0010071: root meristem specification	3.78E-03
124	GO:0007231: osmosensory signaling pathway	3.78E-03
125	GO:0009052: pentose-phosphate shunt, non-oxidative branch	3.78E-03
126	GO:0010207: photosystem II assembly	3.85E-03
127	GO:0015995: chlorophyll biosynthetic process	4.15E-03
128	GO:0019853: L-ascorbic acid biosynthetic process	4.32E-03
129	GO:0070588: calcium ion transmembrane transport	4.32E-03
130	GO:0033500: carbohydrate homeostasis	5.10E-03
131	GO:0042274: ribosomal small subunit biogenesis	5.10E-03
132	GO:0006661: phosphatidylinositol biosynthetic process	5.10E-03
133	GO:0006021: inositol biosynthetic process	5.10E-03
134	GO:0009765: photosynthesis, light harvesting	5.10E-03
135	GO:2000306: positive regulation of photomorphogenesis	5.10E-03
136	GO:0006109: regulation of carbohydrate metabolic process	5.10E-03
137	GO:0006734: NADH metabolic process	5.10E-03
138	GO:0022622: root system development	5.10E-03
139	GO:0045723: positive regulation of fatty acid biosynthetic process	5.10E-03
140	GO:0051567: histone H3-K9 methylation	5.10E-03
141	GO:0010508: positive regulation of autophagy	5.10E-03
142	GO:0008295: spermidine biosynthetic process	5.10E-03
143	GO:0010109: regulation of photosynthesis	5.10E-03
144	GO:2000122: negative regulation of stomatal complex development	5.10E-03
145	GO:0005975: carbohydrate metabolic process	5.72E-03
146	GO:0007017: microtubule-based process	5.92E-03
147	GO:0032543: mitochondrial translation	6.57E-03
148	GO:0032876: negative regulation of DNA endoreduplication	6.57E-03
149	GO:0006564: L-serine biosynthetic process	6.57E-03
150	GO:0010375: stomatal complex patterning	6.57E-03
151	GO:0010236: plastoquinone biosynthetic process	6.57E-03
152	GO:0031365: N-terminal protein amino acid modification	6.57E-03
153	GO:0009107: lipoate biosynthetic process	6.57E-03
154	GO:0080110: sporopollenin biosynthetic process	6.57E-03
155	GO:0016123: xanthophyll biosynthetic process	6.57E-03
156	GO:0034599: cellular response to oxidative stress	6.79E-03
157	GO:0006730: one-carbon metabolic process	7.15E-03
158	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	8.16E-03
159	GO:0009959: negative gravitropism	8.16E-03
160	GO:0016458: gene silencing	8.16E-03
161	GO:0016554: cytidine to uridine editing	8.16E-03
162	GO:0050665: hydrogen peroxide biosynthetic process	8.16E-03
163	GO:0032973: amino acid export	8.16E-03
164	GO:0000741: karyogamy	8.16E-03
165	GO:0046855: inositol phosphate dephosphorylation	8.16E-03
166	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	8.16E-03
167	GO:0006655: phosphatidylglycerol biosynthetic process	8.16E-03
168	GO:0017148: negative regulation of translation	9.88E-03
169	GO:0048280: vesicle fusion with Golgi apparatus	9.88E-03
170	GO:0009854: oxidative photosynthetic carbon pathway	9.88E-03
171	GO:2000033: regulation of seed dormancy process	9.88E-03
172	GO:0080086: stamen filament development	9.88E-03
173	GO:0008033: tRNA processing	9.98E-03
174	GO:0010087: phloem or xylem histogenesis	9.98E-03
175	GO:0040008: regulation of growth	1.05E-02
176	GO:0010305: leaf vascular tissue pattern formation	1.08E-02
177	GO:0009958: positive gravitropism	1.08E-02
178	GO:0009646: response to absence of light	1.16E-02
179	GO:0070370: cellular heat acclimation	1.17E-02
180	GO:0048528: post-embryonic root development	1.17E-02
181	GO:0009772: photosynthetic electron transport in photosystem II	1.17E-02
182	GO:0043090: amino acid import	1.17E-02
183	GO:0010444: guard mother cell differentiation	1.17E-02
184	GO:0051693: actin filament capping	1.17E-02
185	GO:0015979: photosynthesis	1.17E-02
186	GO:0006400: tRNA modification	1.17E-02
187	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.17E-02
188	GO:0010103: stomatal complex morphogenesis	1.17E-02
189	GO:0032880: regulation of protein localization	1.17E-02
190	GO:0010374: stomatal complex development	1.17E-02
191	GO:0019252: starch biosynthetic process	1.25E-02
192	GO:0007155: cell adhesion	1.37E-02
193	GO:0048564: photosystem I assembly	1.37E-02
194	GO:0009690: cytokinin metabolic process	1.37E-02
195	GO:0006605: protein targeting	1.37E-02
196	GO:0010078: maintenance of root meristem identity	1.37E-02
197	GO:0032875: regulation of DNA endoreduplication	1.37E-02
198	GO:2000070: regulation of response to water deprivation	1.37E-02
199	GO:0042255: ribosome assembly	1.37E-02
200	GO:0000105: histidine biosynthetic process	1.37E-02
201	GO:0046620: regulation of organ growth	1.37E-02
202	GO:0006353: DNA-templated transcription, termination	1.37E-02
203	GO:0070413: trehalose metabolism in response to stress	1.37E-02
204	GO:0006875: cellular metal ion homeostasis	1.37E-02
205	GO:0010052: guard cell differentiation	1.57E-02
206	GO:0015996: chlorophyll catabolic process	1.57E-02
207	GO:0010204: defense response signaling pathway, resistance gene-independent	1.57E-02
208	GO:0032544: plastid translation	1.57E-02
209	GO:0007186: G-protein coupled receptor signaling pathway	1.57E-02
210	GO:0010497: plasmodesmata-mediated intercellular transport	1.57E-02
211	GO:0043562: cellular response to nitrogen levels	1.57E-02
212	GO:0017004: cytochrome complex assembly	1.57E-02
213	GO:0001558: regulation of cell growth	1.57E-02
214	GO:0006508: proteolysis	1.75E-02
215	GO:0080144: amino acid homeostasis	1.79E-02
216	GO:0098656: anion transmembrane transport	1.79E-02
217	GO:0046916: cellular transition metal ion homeostasis	1.79E-02
218	GO:0009051: pentose-phosphate shunt, oxidative branch	1.79E-02
219	GO:0000373: Group II intron splicing	1.79E-02
220	GO:0000902: cell morphogenesis	1.79E-02
221	GO:0006397: mRNA processing	1.96E-02
222	GO:0009638: phototropism	2.01E-02
223	GO:0006779: porphyrin-containing compound biosynthetic process	2.01E-02
224	GO:0031425: chloroplast RNA processing	2.01E-02
225	GO:0009299: mRNA transcription	2.25E-02
226	GO:0010162: seed dormancy process	2.25E-02
227	GO:0006896: Golgi to vacuole transport	2.25E-02
228	GO:0030422: production of siRNA involved in RNA interference	2.25E-02
229	GO:0006782: protoporphyrinogen IX biosynthetic process	2.25E-02
230	GO:0045036: protein targeting to chloroplast	2.25E-02
231	GO:0009641: shade avoidance	2.25E-02
232	GO:0009409: response to cold	2.37E-02
233	GO:0009089: lysine biosynthetic process via diaminopimelate	2.49E-02
234	GO:0009073: aromatic amino acid family biosynthetic process	2.49E-02
235	GO:0043085: positive regulation of catalytic activity	2.49E-02
236	GO:1903507: negative regulation of nucleic acid-templated transcription	2.49E-02
237	GO:0006816: calcium ion transport	2.49E-02
238	GO:0048229: gametophyte development	2.49E-02
239	GO:0010216: maintenance of DNA methylation	2.49E-02
240	GO:0009684: indoleacetic acid biosynthetic process	2.49E-02
241	GO:0055114: oxidation-reduction process	2.54E-02
242	GO:0018298: protein-chromophore linkage	2.54E-02
243	GO:0006790: sulfur compound metabolic process	2.75E-02
244	GO:0016024: CDP-diacylglycerol biosynthetic process	2.75E-02
245	GO:0045037: protein import into chloroplast stroma	2.75E-02
246	GO:0048527: lateral root development	2.94E-02
247	GO:0030048: actin filament-based movement	3.01E-02
248	GO:0010628: positive regulation of gene expression	3.01E-02
249	GO:0010588: cotyledon vascular tissue pattern formation	3.01E-02
250	GO:0006108: malate metabolic process	3.01E-02
251	GO:2000012: regulation of auxin polar transport	3.01E-02
252	GO:0030036: actin cytoskeleton organization	3.01E-02
253	GO:0050826: response to freezing	3.01E-02
254	GO:0009718: anthocyanin-containing compound biosynthetic process	3.01E-02
255	GO:0010075: regulation of meristem growth	3.01E-02
256	GO:0009725: response to hormone	3.01E-02
257	GO:0009767: photosynthetic electron transport chain	3.01E-02
258	GO:0045087: innate immune response	3.22E-02
259	GO:0048467: gynoecium development	3.28E-02
260	GO:0007015: actin filament organization	3.28E-02
261	GO:0010020: chloroplast fission	3.28E-02
262	GO:0009887: animal organ morphogenesis	3.28E-02
263	GO:0009934: regulation of meristem structural organization	3.28E-02
264	GO:0009790: embryo development	3.29E-02
265	GO:0010030: positive regulation of seed germination	3.56E-02
266	GO:0046854: phosphatidylinositol phosphorylation	3.56E-02
267	GO:0030001: metal ion transport	3.67E-02
268	GO:0006839: mitochondrial transport	3.67E-02
269	GO:0006413: translational initiation	3.71E-02
270	GO:0000162: tryptophan biosynthetic process	3.85E-02
271	GO:0006071: glycerol metabolic process	3.85E-02
272	GO:0005992: trehalose biosynthetic process	4.14E-02
273	GO:0009944: polarity specification of adaxial/abaxial axis	4.14E-02
274	GO:0051302: regulation of cell division	4.44E-02
275	GO:0008299: isoprenoid biosynthetic process	4.44E-02
276	GO:0006418: tRNA aminoacylation for protein translation	4.44E-02
277	GO:0019915: lipid storage	4.75E-02
278	GO:0006306: DNA methylation	4.75E-02
279	GO:0048511: rhythmic process	4.75E-02
280	GO:0007166: cell surface receptor signaling pathway	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0004076: biotin synthase activity	0.00E+00
2	GO:0050613: delta14-sterol reductase activity	0.00E+00
3	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
4	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
5	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
6	GO:0004823: leucine-tRNA ligase activity	0.00E+00
7	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
8	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
9	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
10	GO:0015267: channel activity	0.00E+00
11	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
12	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
13	GO:0046905: phytoene synthase activity	0.00E+00
14	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
15	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
16	GO:0005048: signal sequence binding	0.00E+00
17	GO:0019156: isoamylase activity	2.25E-05
18	GO:0070402: NADPH binding	7.27E-05
19	GO:0016987: sigma factor activity	2.54E-04
20	GO:0016279: protein-lysine N-methyltransferase activity	2.54E-04
21	GO:0043495: protein anchor	2.54E-04
22	GO:0001053: plastid sigma factor activity	2.54E-04
23	GO:0004556: alpha-amylase activity	5.30E-04
24	GO:0005528: FK506 binding	6.60E-04
25	GO:0003723: RNA binding	6.99E-04
26	GO:0004856: xylulokinase activity	7.28E-04
27	GO:0005227: calcium activated cation channel activity	7.28E-04
28	GO:0004425: indole-3-glycerol-phosphate synthase activity	7.28E-04
29	GO:0016776: phosphotransferase activity, phosphate group as acceptor	7.28E-04
30	GO:0005080: protein kinase C binding	7.28E-04
31	GO:0080042: ADP-glucose pyrophosphohydrolase activity	7.28E-04
32	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	7.28E-04
33	GO:0008746: NAD(P)+ transhydrogenase activity	7.28E-04
34	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	7.28E-04
35	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	7.28E-04
36	GO:0004813: alanine-tRNA ligase activity	7.28E-04
37	GO:0042586: peptide deformylase activity	7.28E-04
38	GO:0010347: L-galactose-1-phosphate phosphatase activity	7.28E-04
39	GO:0051996: squalene synthase activity	7.28E-04
40	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	7.28E-04
41	GO:0051777: ent-kaurenoate oxidase activity	7.28E-04
42	GO:0019899: enzyme binding	8.94E-04
43	GO:0004033: aldo-keto reductase (NADP) activity	1.11E-03
44	GO:0047134: protein-disulfide reductase activity	1.31E-03
45	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.57E-03
46	GO:0004766: spermidine synthase activity	1.57E-03
47	GO:0052832: inositol monophosphate 3-phosphatase activity	1.57E-03
48	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.57E-03
49	GO:0004750: ribulose-phosphate 3-epimerase activity	1.57E-03
50	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	1.57E-03
51	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.57E-03
52	GO:0008934: inositol monophosphate 1-phosphatase activity	1.57E-03
53	GO:0008493: tetracycline transporter activity	1.57E-03
54	GO:0017118: lipoyltransferase activity	1.57E-03
55	GO:0052833: inositol monophosphate 4-phosphatase activity	1.57E-03
56	GO:0004826: phenylalanine-tRNA ligase activity	1.57E-03
57	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.57E-03
58	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.57E-03
59	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.57E-03
60	GO:0043425: bHLH transcription factor binding	1.57E-03
61	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.57E-03
62	GO:0004617: phosphoglycerate dehydrogenase activity	1.57E-03
63	GO:0003747: translation release factor activity	1.62E-03
64	GO:0004791: thioredoxin-disulfide reductase activity	1.75E-03
65	GO:0004519: endonuclease activity	2.23E-03
66	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.27E-03
67	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.47E-03
68	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.60E-03
69	GO:0004180: carboxypeptidase activity	2.60E-03
70	GO:0016992: lipoate synthase activity	2.60E-03
71	GO:0003913: DNA photolyase activity	2.60E-03
72	GO:0016805: dipeptidase activity	2.60E-03
73	GO:0002161: aminoacyl-tRNA editing activity	2.60E-03
74	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	2.60E-03
75	GO:0004848: ureidoglycolate hydrolase activity	2.60E-03
76	GO:0008864: formyltetrahydrofolate deformylase activity	2.60E-03
77	GO:0008237: metallopeptidase activity	2.89E-03
78	GO:0000049: tRNA binding	2.99E-03
79	GO:0016597: amino acid binding	3.12E-03
80	GO:0031072: heat shock protein binding	3.40E-03
81	GO:0005262: calcium channel activity	3.40E-03
82	GO:0015086: cadmium ion transmembrane transporter activity	3.78E-03
83	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	3.78E-03
84	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	3.78E-03
85	GO:0016149: translation release factor activity, codon specific	3.78E-03
86	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	3.78E-03
87	GO:0048027: mRNA 5'-UTR binding	3.78E-03
88	GO:0043023: ribosomal large subunit binding	3.78E-03
89	GO:0035197: siRNA binding	3.78E-03
90	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	3.78E-03
91	GO:0016851: magnesium chelatase activity	3.78E-03
92	GO:0017057: 6-phosphogluconolactonase activity	3.78E-03
93	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	3.78E-03
94	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.85E-03
95	GO:0008266: poly(U) RNA binding	3.85E-03
96	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	5.10E-03
97	GO:0004045: aminoacyl-tRNA hydrolase activity	5.10E-03
98	GO:0080032: methyl jasmonate esterase activity	5.10E-03
99	GO:0042277: peptide binding	5.10E-03
100	GO:0004392: heme oxygenase (decyclizing) activity	5.10E-03
101	GO:0008891: glycolate oxidase activity	5.10E-03
102	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	5.10E-03
103	GO:0019199: transmembrane receptor protein kinase activity	5.10E-03
104	GO:0004659: prenyltransferase activity	5.10E-03
105	GO:0004222: metalloendopeptidase activity	5.36E-03
106	GO:0003924: GTPase activity	5.93E-03
107	GO:0003824: catalytic activity	5.99E-03
108	GO:0004176: ATP-dependent peptidase activity	6.52E-03
109	GO:0016846: carbon-sulfur lyase activity	6.57E-03
110	GO:0016773: phosphotransferase activity, alcohol group as acceptor	6.57E-03
111	GO:0016788: hydrolase activity, acting on ester bonds	6.58E-03
112	GO:0003993: acid phosphatase activity	6.79E-03
113	GO:0005525: GTP binding	7.35E-03
114	GO:0022891: substrate-specific transmembrane transporter activity	7.80E-03
115	GO:0080030: methyl indole-3-acetate esterase activity	8.16E-03
116	GO:0016208: AMP binding	8.16E-03
117	GO:0004462: lactoylglutathione lyase activity	8.16E-03
118	GO:0004526: ribonuclease P activity	8.16E-03
119	GO:0016615: malate dehydrogenase activity	8.16E-03
120	GO:0008200: ion channel inhibitor activity	8.16E-03
121	GO:0003727: single-stranded RNA binding	8.50E-03
122	GO:0004185: serine-type carboxypeptidase activity	8.89E-03
123	GO:0008195: phosphatidate phosphatase activity	9.88E-03
124	GO:0003730: mRNA 3'-UTR binding	9.88E-03
125	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	9.88E-03
126	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	9.88E-03
127	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	9.88E-03
128	GO:0030060: L-malate dehydrogenase activity	9.88E-03
129	GO:0005261: cation channel activity	9.88E-03
130	GO:0015103: inorganic anion transmembrane transporter activity	1.17E-02
131	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.30E-02
132	GO:0003690: double-stranded DNA binding	1.36E-02
133	GO:0008312: 7S RNA binding	1.37E-02
134	GO:0046914: transition metal ion binding	1.57E-02
135	GO:0042802: identical protein binding	1.62E-02
136	GO:0005200: structural constituent of cytoskeleton	1.73E-02
137	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.79E-02
138	GO:0016168: chlorophyll binding	2.05E-02
139	GO:0015035: protein disulfide oxidoreductase activity	2.12E-02
140	GO:0008047: enzyme activator activity	2.25E-02
141	GO:0015020: glucuronosyltransferase activity	2.25E-02
142	GO:0008559: xenobiotic-transporting ATPase activity	2.49E-02
143	GO:0008378: galactosyltransferase activity	2.75E-02
144	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.75E-02
145	GO:0004521: endoribonuclease activity	2.75E-02
146	GO:0009982: pseudouridine synthase activity	3.01E-02
147	GO:0005315: inorganic phosphate transmembrane transporter activity	3.01E-02
148	GO:0004089: carbonate dehydratase activity	3.01E-02
149	GO:0003774: motor activity	3.28E-02
150	GO:0008083: growth factor activity	3.28E-02
151	GO:0052689: carboxylic ester hydrolase activity	3.46E-02
152	GO:0008146: sulfotransferase activity	3.56E-02
153	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.71E-02
154	GO:0004857: enzyme inhibitor activity	4.14E-02
155	GO:0003714: transcription corepressor activity	4.14E-02
156	GO:0005345: purine nucleobase transmembrane transporter activity	4.44E-02
157	GO:0035091: phosphatidylinositol binding	4.48E-02
158	GO:0033612: receptor serine/threonine kinase binding	4.75E-02
159	GO:0003743: translation initiation factor activity	4.89E-02
160	GO:0016491: oxidoreductase activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009507: chloroplast	2.29E-39
3	GO:0009570: chloroplast stroma	1.30E-17
4	GO:0009508: plastid chromosome	1.71E-08
5	GO:0009295: nucleoid	1.93E-07
6	GO:0009941: chloroplast envelope	5.20E-06
7	GO:0009535: chloroplast thylakoid membrane	6.09E-06
8	GO:0080085: signal recognition particle, chloroplast targeting	2.25E-05
9	GO:0009543: chloroplast thylakoid lumen	6.98E-05
10	GO:0030529: intracellular ribonucleoprotein complex	7.14E-05
11	GO:0010319: stromule	4.65E-04
12	GO:0009344: nitrite reductase complex [NAD(P)H]	7.28E-04
13	GO:0042651: thylakoid membrane	7.50E-04
14	GO:0031969: chloroplast membrane	7.87E-04
15	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.35E-03
16	GO:0008290: F-actin capping protein complex	1.57E-03
17	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.57E-03
18	GO:0000778: condensed nuclear chromosome kinetochore	1.57E-03
19	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.62E-03
20	GO:0042644: chloroplast nucleoid	1.62E-03
21	GO:0009528: plastid inner membrane	2.60E-03
22	GO:0010007: magnesium chelatase complex	2.60E-03
23	GO:0009579: thylakoid	3.46E-03
24	GO:0009534: chloroplast thylakoid	3.55E-03
25	GO:0042646: plastid nucleoid	3.78E-03
26	GO:0005719: nuclear euchromatin	3.78E-03
27	GO:0030658: transport vesicle membrane	3.78E-03
28	GO:0015630: microtubule cytoskeleton	3.78E-03
29	GO:0009707: chloroplast outer membrane	4.73E-03
30	GO:0009706: chloroplast inner membrane	4.88E-03
31	GO:0030663: COPI-coated vesicle membrane	5.10E-03
32	GO:0009527: plastid outer membrane	5.10E-03
33	GO:0009654: photosystem II oxygen evolving complex	5.92E-03
34	GO:0009536: plastid	7.93E-03
35	GO:0005886: plasma membrane	1.09E-02
36	GO:0009523: photosystem II	1.25E-02
37	GO:0019898: extrinsic component of membrane	1.25E-02
38	GO:0012507: ER to Golgi transport vesicle membrane	1.37E-02
39	GO:0009501: amyloplast	1.37E-02
40	GO:0005720: nuclear heterochromatin	1.79E-02
41	GO:0005680: anaphase-promoting complex	1.79E-02
42	GO:0045298: tubulin complex	1.79E-02
43	GO:0016604: nuclear body	2.01E-02
44	GO:0015030: Cajal body	2.01E-02
45	GO:0043231: intracellular membrane-bounded organelle	2.15E-02
46	GO:0000418: DNA-directed RNA polymerase IV complex	2.25E-02
47	GO:0016459: myosin complex	2.25E-02
48	GO:0030125: clathrin vesicle coat	2.25E-02
49	GO:0005884: actin filament	2.49E-02
50	GO:0030095: chloroplast photosystem II	3.28E-02
51	GO:0030176: integral component of endoplasmic reticulum membrane	3.56E-02
52	GO:0031977: thylakoid lumen	3.82E-02
53	GO:0009532: plastid stroma	4.75E-02