Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G48850

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
2GO:0009312: oligosaccharide biosynthetic process0.00E+00
3GO:0033587: shikimate biosynthetic process0.00E+00
4GO:0032491: detection of molecule of fungal origin0.00E+00
5GO:0009268: response to pH0.00E+00
6GO:0032499: detection of peptidoglycan0.00E+00
7GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
8GO:0071327: cellular response to trehalose stimulus0.00E+00
9GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
10GO:1900367: positive regulation of defense response to insect0.00E+00
11GO:0002764: immune response-regulating signaling pathway0.00E+00
12GO:0060548: negative regulation of cell death5.61E-05
13GO:0006952: defense response7.90E-05
14GO:0006499: N-terminal protein myristoylation1.06E-04
15GO:0006468: protein phosphorylation1.08E-04
16GO:2000022: regulation of jasmonic acid mediated signaling pathway1.58E-04
17GO:0031348: negative regulation of defense response1.58E-04
18GO:0046777: protein autophosphorylation1.86E-04
19GO:0010150: leaf senescence2.49E-04
20GO:0019673: GDP-mannose metabolic process2.92E-04
21GO:0006562: proline catabolic process2.92E-04
22GO:1901183: positive regulation of camalexin biosynthetic process2.92E-04
23GO:0032469: endoplasmic reticulum calcium ion homeostasis2.92E-04
24GO:0006470: protein dephosphorylation3.22E-04
25GO:0010204: defense response signaling pathway, resistance gene-independent3.57E-04
26GO:0009751: response to salicylic acid3.65E-04
27GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.10E-04
28GO:0031349: positive regulation of defense response6.40E-04
29GO:0010115: regulation of abscisic acid biosynthetic process6.40E-04
30GO:0015865: purine nucleotide transport6.40E-04
31GO:0010271: regulation of chlorophyll catabolic process6.40E-04
32GO:0010541: acropetal auxin transport6.40E-04
33GO:0019725: cellular homeostasis6.40E-04
34GO:0046939: nucleotide phosphorylation6.40E-04
35GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.40E-04
36GO:0010133: proline catabolic process to glutamate6.40E-04
37GO:0080185: effector dependent induction by symbiont of host immune response6.40E-04
38GO:0010618: aerenchyma formation6.40E-04
39GO:1902066: regulation of cell wall pectin metabolic process6.40E-04
40GO:0002240: response to molecule of oomycetes origin6.40E-04
41GO:0009817: defense response to fungus, incompatible interaction8.32E-04
42GO:0010200: response to chitin8.69E-04
43GO:0007034: vacuolar transport9.97E-04
44GO:0009266: response to temperature stimulus9.97E-04
45GO:1901672: positive regulation of systemic acquired resistance1.04E-03
46GO:0048586: regulation of long-day photoperiodism, flowering1.04E-03
47GO:0032922: circadian regulation of gene expression1.04E-03
48GO:0016045: detection of bacterium1.04E-03
49GO:0034051: negative regulation of plant-type hypersensitive response1.04E-03
50GO:1900140: regulation of seedling development1.04E-03
51GO:0010359: regulation of anion channel activity1.04E-03
52GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.04E-03
53GO:0051176: positive regulation of sulfur metabolic process1.04E-03
54GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.04E-03
55GO:0010498: proteasomal protein catabolic process1.04E-03
56GO:0010167: response to nitrate1.11E-03
57GO:0009863: salicylic acid mediated signaling pathway1.37E-03
58GO:0042742: defense response to bacterium1.46E-03
59GO:0006537: glutamate biosynthetic process1.48E-03
60GO:0010731: protein glutathionylation1.48E-03
61GO:0071323: cellular response to chitin1.48E-03
62GO:0046836: glycolipid transport1.48E-03
63GO:0046902: regulation of mitochondrial membrane permeability1.48E-03
64GO:0010104: regulation of ethylene-activated signaling pathway1.48E-03
65GO:0072583: clathrin-dependent endocytosis1.48E-03
66GO:0016226: iron-sulfur cluster assembly1.81E-03
67GO:0071219: cellular response to molecule of bacterial origin1.99E-03
68GO:0080142: regulation of salicylic acid biosynthetic process1.99E-03
69GO:0045227: capsule polysaccharide biosynthetic process1.99E-03
70GO:0033358: UDP-L-arabinose biosynthetic process1.99E-03
71GO:0006486: protein glycosylation2.24E-03
72GO:0007165: signal transduction2.52E-03
73GO:0018344: protein geranylgeranylation2.54E-03
74GO:0010225: response to UV-C2.54E-03
75GO:0009247: glycolipid biosynthetic process2.54E-03
76GO:0006970: response to osmotic stress2.98E-03
77GO:0009626: plant-type hypersensitive response3.00E-03
78GO:0009620: response to fungus3.12E-03
79GO:0018258: protein O-linked glycosylation via hydroxyproline3.14E-03
80GO:0002238: response to molecule of fungal origin3.14E-03
81GO:0010942: positive regulation of cell death3.14E-03
82GO:0010405: arabinogalactan protein metabolic process3.14E-03
83GO:0007264: small GTPase mediated signal transduction3.57E-03
84GO:0018105: peptidyl-serine phosphorylation3.64E-03
85GO:0031930: mitochondria-nucleus signaling pathway3.77E-03
86GO:0045926: negative regulation of growth3.77E-03
87GO:0010310: regulation of hydrogen peroxide metabolic process3.77E-03
88GO:0006904: vesicle docking involved in exocytosis4.30E-03
89GO:0070370: cellular heat acclimation4.45E-03
90GO:1900056: negative regulation of leaf senescence4.45E-03
91GO:0035556: intracellular signal transduction4.87E-03
92GO:0009816: defense response to bacterium, incompatible interaction5.10E-03
93GO:0030162: regulation of proteolysis5.17E-03
94GO:0006491: N-glycan processing5.17E-03
95GO:0019375: galactolipid biosynthetic process5.17E-03
96GO:0045010: actin nucleation5.17E-03
97GO:0009787: regulation of abscisic acid-activated signaling pathway5.17E-03
98GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.17E-03
99GO:0009627: systemic acquired resistance5.38E-03
100GO:2000031: regulation of salicylic acid mediated signaling pathway5.92E-03
101GO:0010099: regulation of photomorphogenesis5.92E-03
102GO:0009932: cell tip growth5.92E-03
103GO:0051865: protein autoubiquitination6.71E-03
104GO:0006098: pentose-phosphate shunt6.71E-03
105GO:0055085: transmembrane transport6.73E-03
106GO:0048527: lateral root development7.28E-03
107GO:1900426: positive regulation of defense response to bacterium7.54E-03
108GO:0043067: regulation of programmed cell death7.54E-03
109GO:0048268: clathrin coat assembly7.54E-03
110GO:0048354: mucilage biosynthetic process involved in seed coat development7.54E-03
111GO:0010380: regulation of chlorophyll biosynthetic process7.54E-03
112GO:0009867: jasmonic acid mediated signaling pathway7.98E-03
113GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process8.12E-03
114GO:0009870: defense response signaling pathway, resistance gene-dependent8.40E-03
115GO:0009617: response to bacterium8.82E-03
116GO:0009089: lysine biosynthetic process via diaminopimelate9.30E-03
117GO:0015706: nitrate transport1.02E-02
118GO:0010105: negative regulation of ethylene-activated signaling pathway1.02E-02
119GO:0008361: regulation of cell size1.02E-02
120GO:0002213: defense response to insect1.02E-02
121GO:0051707: response to other organism1.03E-02
122GO:0006626: protein targeting to mitochondrion1.12E-02
123GO:0018107: peptidyl-threonine phosphorylation1.12E-02
124GO:0055046: microgametogenesis1.12E-02
125GO:0006829: zinc II ion transport1.12E-02
126GO:0034605: cellular response to heat1.22E-02
127GO:0002237: response to molecule of bacterial origin1.22E-02
128GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.25E-02
129GO:0006812: cation transport1.30E-02
130GO:0046854: phosphatidylinositol phosphorylation1.32E-02
131GO:0009225: nucleotide-sugar metabolic process1.32E-02
132GO:0045333: cellular respiration1.54E-02
133GO:0080147: root hair cell development1.54E-02
134GO:0006487: protein N-linked glycosylation1.54E-02
135GO:0009269: response to desiccation1.76E-02
136GO:0071456: cellular response to hypoxia1.88E-02
137GO:0009625: response to insect2.00E-02
138GO:0006012: galactose metabolic process2.00E-02
139GO:0009561: megagametogenesis2.12E-02
140GO:0009306: protein secretion2.12E-02
141GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.25E-02
142GO:0006885: regulation of pH2.50E-02
143GO:0009408: response to heat2.64E-02
144GO:0048544: recognition of pollen2.64E-02
145GO:0009749: response to glucose2.77E-02
146GO:0048364: root development2.78E-02
147GO:0016032: viral process3.05E-02
148GO:0016579: protein deubiquitination3.63E-02
149GO:0051607: defense response to virus3.63E-02
150GO:0001666: response to hypoxia3.78E-02
151GO:0009615: response to virus3.78E-02
152GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.93E-02
153GO:0042128: nitrate assimilation4.09E-02
154GO:0006950: response to stress4.25E-02
155GO:0009414: response to water deprivation4.34E-02
156GO:0008219: cell death4.57E-02
157GO:0009813: flavonoid biosynthetic process4.73E-02
RankGO TermAdjusted P value
1GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
2GO:0005212: structural constituent of eye lens0.00E+00
3GO:2001080: chitosan binding0.00E+00
4GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
5GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
6GO:0005522: profilin binding0.00E+00
7GO:0016301: kinase activity2.10E-05
8GO:0019199: transmembrane receptor protein kinase activity5.61E-05
9GO:0070696: transmembrane receptor protein serine/threonine kinase binding8.85E-05
10GO:0004674: protein serine/threonine kinase activity1.58E-04
11GO:0004657: proline dehydrogenase activity2.92E-04
12GO:0046481: digalactosyldiacylglycerol synthase activity2.92E-04
13GO:0010285: L,L-diaminopimelate aminotransferase activity2.92E-04
14GO:0032050: clathrin heavy chain binding2.92E-04
15GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity2.92E-04
16GO:1901149: salicylic acid binding2.92E-04
17GO:0004662: CAAX-protein geranylgeranyltransferase activity2.92E-04
18GO:0008446: GDP-mannose 4,6-dehydratase activity2.92E-04
19GO:0005524: ATP binding5.95E-04
20GO:0048531: beta-1,3-galactosyltransferase activity6.40E-04
21GO:0008559: xenobiotic-transporting ATPase activity6.86E-04
22GO:0005515: protein binding8.37E-04
23GO:0005525: GTP binding9.28E-04
24GO:0004722: protein serine/threonine phosphatase activity1.31E-03
25GO:0035250: UDP-galactosyltransferase activity1.48E-03
26GO:0017089: glycolipid transporter activity1.48E-03
27GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity1.48E-03
28GO:0019201: nucleotide kinase activity1.48E-03
29GO:0043424: protein histidine kinase binding1.51E-03
30GO:0033612: receptor serine/threonine kinase binding1.66E-03
31GO:0009916: alternative oxidase activity1.99E-03
32GO:0050373: UDP-arabinose 4-epimerase activity1.99E-03
33GO:0051861: glycolipid binding1.99E-03
34GO:0004040: amidase activity2.54E-03
35GO:0005471: ATP:ADP antiporter activity2.54E-03
36GO:0045431: flavonol synthase activity2.54E-03
37GO:0043531: ADP binding3.06E-03
38GO:1990714: hydroxyproline O-galactosyltransferase activity3.14E-03
39GO:0004672: protein kinase activity3.39E-03
40GO:0003978: UDP-glucose 4-epimerase activity3.77E-03
41GO:0004017: adenylate kinase activity3.77E-03
42GO:0004656: procollagen-proline 4-dioxygenase activity3.77E-03
43GO:0004723: calcium-dependent protein serine/threonine phosphatase activity3.77E-03
44GO:0004559: alpha-mannosidase activity3.77E-03
45GO:0005509: calcium ion binding4.09E-03
46GO:0004714: transmembrane receptor protein tyrosine kinase activity5.17E-03
47GO:0008375: acetylglucosaminyltransferase activity5.38E-03
48GO:0009931: calcium-dependent protein serine/threonine kinase activity5.38E-03
49GO:0004683: calmodulin-dependent protein kinase activity5.68E-03
50GO:0004430: 1-phosphatidylinositol 4-kinase activity5.92E-03
51GO:0008271: secondary active sulfate transmembrane transporter activity5.92E-03
52GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.44E-03
53GO:0071949: FAD binding6.71E-03
54GO:0015112: nitrate transmembrane transporter activity7.54E-03
55GO:0004568: chitinase activity8.40E-03
56GO:0005545: 1-phosphatidylinositol binding8.40E-03
57GO:0008047: enzyme activator activity8.40E-03
58GO:0004842: ubiquitin-protein transferase activity9.01E-03
59GO:0005543: phospholipid binding9.30E-03
60GO:0042626: ATPase activity, coupled to transmembrane movement of substances9.56E-03
61GO:0015116: sulfate transmembrane transporter activity1.02E-02
62GO:0008378: galactosyltransferase activity1.02E-02
63GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.12E-02
64GO:0031072: heat shock protein binding1.12E-02
65GO:0005262: calcium channel activity1.12E-02
66GO:0008061: chitin binding1.32E-02
67GO:0016298: lipase activity1.44E-02
68GO:0031418: L-ascorbic acid binding1.54E-02
69GO:0003954: NADH dehydrogenase activity1.54E-02
70GO:0031625: ubiquitin protein ligase binding1.54E-02
71GO:0008324: cation transmembrane transporter activity1.65E-02
72GO:0051087: chaperone binding1.65E-02
73GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.70E-02
74GO:0005451: monovalent cation:proton antiporter activity2.37E-02
75GO:0046873: metal ion transmembrane transporter activity2.50E-02
76GO:0030276: clathrin binding2.50E-02
77GO:0003924: GTPase activity2.64E-02
78GO:0015299: solute:proton antiporter activity2.64E-02
79GO:0004872: receptor activity2.77E-02
80GO:0004843: thiol-dependent ubiquitin-specific protease activity2.91E-02
81GO:0015385: sodium:proton antiporter activity3.19E-02
82GO:0051015: actin filament binding3.19E-02
83GO:0008483: transaminase activity3.48E-02
84GO:0004806: triglyceride lipase activity4.25E-02
85GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.41E-02
86GO:0015238: drug transmembrane transporter activity4.73E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.68E-05
2GO:0005911: cell-cell junction2.92E-04
3GO:0005953: CAAX-protein geranylgeranyltransferase complex2.92E-04
4GO:0005901: caveola6.40E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane6.40E-04
6GO:0030139: endocytic vesicle1.04E-03
7GO:0000164: protein phosphatase type 1 complex2.54E-03
8GO:0000815: ESCRT III complex3.77E-03
9GO:0000325: plant-type vacuole7.28E-03
10GO:0030125: clathrin vesicle coat8.40E-03
11GO:0005740: mitochondrial envelope8.40E-03
12GO:0090404: pollen tube tip9.30E-03
13GO:0005794: Golgi apparatus1.17E-02
14GO:0030176: integral component of endoplasmic reticulum membrane1.32E-02
15GO:0005795: Golgi stack1.32E-02
16GO:0005758: mitochondrial intermembrane space1.54E-02
17GO:0070469: respiratory chain1.65E-02
18GO:0005905: clathrin-coated pit1.76E-02
19GO:0012505: endomembrane system1.93E-02
20GO:0030136: clathrin-coated vesicle2.25E-02
21GO:0005743: mitochondrial inner membrane2.41E-02
22GO:0005770: late endosome2.50E-02
23GO:0000145: exocyst3.05E-02
24GO:0032580: Golgi cisterna membrane3.34E-02
25GO:0016021: integral component of membrane3.76E-02
26GO:0005768: endosome3.86E-02
27GO:0019005: SCF ubiquitin ligase complex4.57E-02
28GO:0009707: chloroplast outer membrane4.57E-02
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Gene type



Gene DE type