co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G48370

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006983: ER overload response	0.00E+00
2	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
3	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
4	GO:1902065: response to L-glutamate	1.33E-04
5	GO:1903648: positive regulation of chlorophyll catabolic process	1.33E-04
6	GO:0034975: protein folding in endoplasmic reticulum	1.33E-04
7	GO:0000077: DNA damage checkpoint	1.33E-04
8	GO:1990641: response to iron ion starvation	1.33E-04
9	GO:0000303: response to superoxide	1.33E-04
10	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.33E-04
11	GO:0006101: citrate metabolic process	3.07E-04
12	GO:0043066: negative regulation of apoptotic process	3.07E-04
13	GO:0080183: response to photooxidative stress	3.07E-04
14	GO:0040020: regulation of meiotic nuclear division	3.07E-04
15	GO:0009812: flavonoid metabolic process	3.07E-04
16	GO:0009901: anther dehiscence	3.84E-04
17	GO:1901562: response to paraquat	5.06E-04
18	GO:0015783: GDP-fucose transport	5.06E-04
19	GO:0006517: protein deglycosylation	5.06E-04
20	GO:0009846: pollen germination	5.12E-04
21	GO:0009738: abscisic acid-activated signaling pathway	5.88E-04
22	GO:0071323: cellular response to chitin	7.24E-04
23	GO:0050482: arachidonic acid secretion	7.24E-04
24	GO:0055070: copper ion homeostasis	7.24E-04
25	GO:0051639: actin filament network formation	7.24E-04
26	GO:0006809: nitric oxide biosynthetic process	7.24E-04
27	GO:0009306: protein secretion	7.38E-04
28	GO:0051764: actin crosslink formation	9.59E-04
29	GO:0022622: root system development	9.59E-04
30	GO:0006097: glyoxylate cycle	1.21E-03
31	GO:0009247: glycolipid biosynthetic process	1.21E-03
32	GO:0006354: DNA-templated transcription, elongation	1.49E-03
33	GO:0001731: formation of translation preinitiation complex	1.49E-03
34	GO:0031930: mitochondria-nucleus signaling pathway	1.78E-03
35	GO:1900057: positive regulation of leaf senescence	2.09E-03
36	GO:0030307: positive regulation of cell growth	2.09E-03
37	GO:0010044: response to aluminum ion	2.09E-03
38	GO:0019375: galactolipid biosynthetic process	2.42E-03
39	GO:0006102: isocitrate metabolic process	2.42E-03
40	GO:0006644: phospholipid metabolic process	2.42E-03
41	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.42E-03
42	GO:0006491: N-glycan processing	2.42E-03
43	GO:1900150: regulation of defense response to fungus	2.42E-03
44	GO:0045087: innate immune response	2.64E-03
45	GO:0006379: mRNA cleavage	3.13E-03
46	GO:0015780: nucleotide-sugar transport	3.13E-03
47	GO:0007338: single fertilization	3.13E-03
48	GO:0010332: response to gamma radiation	3.13E-03
49	GO:0009860: pollen tube growth	3.27E-03
50	GO:0008202: steroid metabolic process	3.50E-03
51	GO:0030042: actin filament depolymerization	3.50E-03
52	GO:0009086: methionine biosynthetic process	3.50E-03
53	GO:0043069: negative regulation of programmed cell death	3.89E-03
54	GO:0016192: vesicle-mediated transport	4.17E-03
55	GO:0042538: hyperosmotic salinity response	4.25E-03
56	GO:0000038: very long-chain fatty acid metabolic process	4.30E-03
57	GO:0006913: nucleocytoplasmic transport	4.30E-03
58	GO:0012501: programmed cell death	4.72E-03
59	GO:0045037: protein import into chloroplast stroma	4.72E-03
60	GO:0030036: actin cytoskeleton organization	5.15E-03
61	GO:0018107: peptidyl-threonine phosphorylation	5.15E-03
62	GO:0010102: lateral root morphogenesis	5.15E-03
63	GO:0006351: transcription, DNA-templated	5.35E-03
64	GO:0007034: vacuolar transport	5.60E-03
65	GO:0006446: regulation of translational initiation	5.60E-03
66	GO:0034605: cellular response to heat	5.60E-03
67	GO:0070588: calcium ion transmembrane transport	6.06E-03
68	GO:0007030: Golgi organization	6.06E-03
69	GO:0009408: response to heat	6.41E-03
70	GO:0034976: response to endoplasmic reticulum stress	6.53E-03
71	GO:0007275: multicellular organism development	6.98E-03
72	GO:0080147: root hair cell development	7.01E-03
73	GO:0051017: actin filament bundle assembly	7.01E-03
74	GO:0006289: nucleotide-excision repair	7.01E-03
75	GO:2000377: regulation of reactive oxygen species metabolic process	7.01E-03
76	GO:0009863: salicylic acid mediated signaling pathway	7.01E-03
77	GO:0045333: cellular respiration	7.01E-03
78	GO:0006334: nucleosome assembly	8.02E-03
79	GO:0048278: vesicle docking	8.02E-03
80	GO:0009845: seed germination	8.79E-03
81	GO:0009873: ethylene-activated signaling pathway	8.87E-03
82	GO:0010584: pollen exine formation	9.63E-03
83	GO:0010197: polar nucleus fusion	1.13E-02
84	GO:0061025: membrane fusion	1.19E-02
85	GO:0006623: protein targeting to vacuole	1.25E-02
86	GO:0006470: protein dephosphorylation	1.28E-02
87	GO:0010193: response to ozone	1.32E-02
88	GO:0016032: viral process	1.38E-02
89	GO:0009630: gravitropism	1.38E-02
90	GO:0030163: protein catabolic process	1.44E-02
91	GO:0006464: cellular protein modification process	1.51E-02
92	GO:0009567: double fertilization forming a zygote and endosperm	1.51E-02
93	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.78E-02
94	GO:0010029: regulation of seed germination	1.78E-02
95	GO:0009816: defense response to bacterium, incompatible interaction	1.78E-02
96	GO:0006457: protein folding	1.84E-02
97	GO:0006906: vesicle fusion	1.85E-02
98	GO:0048573: photoperiodism, flowering	1.92E-02
99	GO:0048767: root hair elongation	2.14E-02
100	GO:0010119: regulation of stomatal movement	2.29E-02
101	GO:0000724: double-strand break repair via homologous recombination	2.36E-02
102	GO:0009867: jasmonic acid mediated signaling pathway	2.44E-02
103	GO:0006099: tricarboxylic acid cycle	2.52E-02
104	GO:0006839: mitochondrial transport	2.68E-02
105	GO:0006897: endocytosis	2.76E-02
106	GO:0010114: response to red light	2.92E-02
107	GO:0000209: protein polyubiquitination	3.01E-02
108	GO:0008643: carbohydrate transport	3.09E-02
109	GO:0016042: lipid catabolic process	3.10E-02
110	GO:0009414: response to water deprivation	3.13E-02
111	GO:0006979: response to oxidative stress	3.26E-02
112	GO:0031347: regulation of defense response	3.35E-02
113	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.35E-02
114	GO:0008152: metabolic process	3.52E-02
115	GO:0010224: response to UV-B	3.71E-02
116	GO:0006355: regulation of transcription, DNA-templated	3.80E-02
117	GO:0006096: glycolytic process	4.07E-02
118	GO:0018105: peptidyl-serine phosphorylation	4.74E-02
119	GO:0006396: RNA processing	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0016530: metallochaperone activity	0.00E+00
2	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.33E-04
3	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.33E-04
4	GO:0046481: digalactosyldiacylglycerol synthase activity	1.33E-04
5	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	3.07E-04
6	GO:0003994: aconitate hydratase activity	3.07E-04
7	GO:0032934: sterol binding	3.07E-04
8	GO:0005457: GDP-fucose transmembrane transporter activity	5.06E-04
9	GO:0000975: regulatory region DNA binding	5.06E-04
10	GO:0035250: UDP-galactosyltransferase activity	7.24E-04
11	GO:0046527: glucosyltransferase activity	9.59E-04
12	GO:0009916: alternative oxidase activity	9.59E-04
13	GO:0004623: phospholipase A2 activity	1.21E-03
14	GO:0047714: galactolipase activity	1.49E-03
15	GO:0035252: UDP-xylosyltransferase activity	1.49E-03
16	GO:0004656: procollagen-proline 4-dioxygenase activity	1.78E-03
17	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.78E-03
18	GO:0008194: UDP-glycosyltransferase activity	1.98E-03
19	GO:0008142: oxysterol binding	2.77E-03
20	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	2.77E-03
21	GO:0030955: potassium ion binding	3.50E-03
22	GO:0004743: pyruvate kinase activity	3.50E-03
23	GO:0043565: sequence-specific DNA binding	4.38E-03
24	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.91E-03
25	GO:0005388: calcium-transporting ATPase activity	5.15E-03
26	GO:0080043: quercetin 3-O-glucosyltransferase activity	5.92E-03
27	GO:0080044: quercetin 7-O-glucosyltransferase activity	5.92E-03
28	GO:0008061: chitin binding	6.06E-03
29	GO:0015035: protein disulfide oxidoreductase activity	6.67E-03
30	GO:0031418: L-ascorbic acid binding	7.01E-03
31	GO:0005509: calcium ion binding	7.55E-03
32	GO:0004707: MAP kinase activity	8.02E-03
33	GO:0003756: protein disulfide isomerase activity	9.63E-03
34	GO:0004499: N,N-dimethylaniline monooxygenase activity	9.63E-03
35	GO:0015297: antiporter activity	1.07E-02
36	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.44E-02
37	GO:0051015: actin filament binding	1.44E-02
38	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.57E-02
39	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.92E-02
40	GO:0004806: triglyceride lipase activity	1.92E-02
41	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.06E-02
42	GO:0004222: metalloendopeptidase activity	2.21E-02
43	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.44E-02
44	GO:0005515: protein binding	2.58E-02
45	GO:0000149: SNARE binding	2.60E-02
46	GO:0016787: hydrolase activity	2.67E-02
47	GO:0050661: NADP binding	2.68E-02
48	GO:0051539: 4 iron, 4 sulfur cluster binding	2.68E-02
49	GO:0004722: protein serine/threonine phosphatase activity	2.84E-02
50	GO:0005484: SNAP receptor activity	2.92E-02
51	GO:0051537: 2 iron, 2 sulfur cluster binding	3.09E-02
52	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.62E-02
53	GO:0022857: transmembrane transporter activity	4.45E-02
54	GO:0003779: actin binding	4.55E-02
55	GO:0016887: ATPase activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005783: endoplasmic reticulum	9.46E-05
2	GO:0032432: actin filament bundle	7.24E-04
3	GO:0000139: Golgi membrane	9.47E-04
4	GO:0005789: endoplasmic reticulum membrane	1.20E-03
5	GO:0016282: eukaryotic 43S preinitiation complex	1.49E-03
6	GO:0005788: endoplasmic reticulum lumen	1.70E-03
7	GO:0033290: eukaryotic 48S preinitiation complex	1.78E-03
8	GO:0016272: prefoldin complex	1.78E-03
9	GO:0016363: nuclear matrix	1.78E-03
10	GO:0031902: late endosome membrane	3.13E-03
11	GO:0030665: clathrin-coated vesicle membrane	3.50E-03
12	GO:0017119: Golgi transport complex	3.89E-03
13	GO:0005884: actin filament	4.30E-03
14	GO:0005743: mitochondrial inner membrane	5.85E-03
15	GO:0016021: integral component of membrane	5.87E-03
16	GO:0043231: intracellular membrane-bounded organelle	7.26E-03
17	GO:0070469: respiratory chain	7.51E-03
18	GO:0015629: actin cytoskeleton	9.08E-03
19	GO:0016592: mediator complex	1.38E-02
20	GO:0005774: vacuolar membrane	1.85E-02
21	GO:0016020: membrane	1.99E-02
22	GO:0009707: chloroplast outer membrane	2.06E-02
23	GO:0015934: large ribosomal subunit	2.29E-02
24	GO:0000325: plant-type vacuole	2.29E-02
25	GO:0005622: intracellular	2.74E-02
26	GO:0031201: SNARE complex	2.76E-02
27	GO:0005737: cytoplasm	3.64E-02
28	GO:0005635: nuclear envelope	3.80E-02
29	GO:0010008: endosome membrane	4.17E-02
30	GO:0005887: integral component of plasma membrane	4.32E-02
31	GO:0009706: chloroplast inner membrane	4.65E-02